Details for gene set V$SRF_Q5

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$SRF_Q5_01
Enrichment Score (ES)	-0.3846636
Normalized Enrichment Score (NES)	-1.5461926
Nominal p-value	0.0
FDR q-value	0.0919466
FWER p-Value	0.713

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	RBBP7	1415775_at 1456227_x_at	149	6.652	0.0183	No
2	DSTN	1417124_at	568	4.148	0.0147	No
3	MBNL1	1416904_at 1439686_at 1440315_at 1445106_at 1457924_at	1198	2.905	-0.0032	No
4	MAPKAPK2	1426648_at	1668	2.413	-0.0157	No
5	EML4	1429612_at 1447838_x_at	1867	2.243	-0.0163	No
6	EEF1B2	1448252_a_at	1887	2.231	-0.0087	No
7	CORO1C	1417752_at 1419911_at 1437721_at 1442972_at 1449660_s_at 1459169_at	1965	2.173	-0.0041	No
8	LRRFIP1	1433842_at 1437477_at 1448487_at	1977	2.164	0.0036	No
9	UNC84B	1433832_at 1439238_at	2002	2.144	0.0106	No
10	PPARG	1420715_a_at	2038	2.118	0.0170	No
11	CKM	1417614_at	2115	2.069	0.0213	No
12	ATF3	1449363_at	2127	2.059	0.0286	No
13	GRK6	1437436_s_at 1450480_a_at 1451672_at	2235	1.990	0.0312	No
14	TPM2	1419738_a_at 1419739_at 1425028_a_at 1449577_x_at	2350	1.923	0.0332	No
15	RSU1	1419259_at	2568	1.802	0.0300	No
16	ASB2	1428444_at 1436259_at	2612	1.784	0.0348	No
17	NPR3	1435184_at 1448024_at 1450286_at	2690	1.753	0.0379	No
18	IGF2AS	1427394_at	2767	1.729	0.0409	No
19	FGF17	1421523_at 1456239_at	2777	1.727	0.0470	No
20	SCOC	1416267_at 1430999_a_at	2864	1.695	0.0495	No
21	TLE3	1419654_at 1419655_at 1449554_at 1458512_at	3278	1.548	0.0363	No
22	ADAMTSL1	1430313_at	3342	1.528	0.0392	No
23	ASPA	1418472_at	3445	1.495	0.0402	No
24	IL17B	1431693_a_at	3452	1.494	0.0455	No
25	EMILIN2	1435264_at	3479	1.480	0.0499	No
26	FGF8	1451882_a_at	3559	1.457	0.0518	No
27	DVL3	1420457_at	3576	1.452	0.0566	No
28	PPAP2B	1429514_at 1446850_at 1448908_at	3624	1.431	0.0598	No
29	SERTAD4	1454877_at	3644	1.425	0.0643	No
30	KCNK3	1425341_at 1425342_a_at 1426058_a_at	3737	1.397	0.0654	No
31	COL1A1	1423669_at 1455494_at	3959	1.344	0.0603	No
32	ITGB1BP2	1423238_at	4021	1.327	0.0625	No
33	FLNC	1424063_at 1447812_x_at 1449073_at	4115	1.305	0.0631	No
34	TRIM3	1451663_a_at	4273	1.273	0.0607	No
35	CNN1	1417917_at	4301	1.268	0.0643	No
36	PLCB3	1448661_at	4500	1.231	0.0598	No
37	MYO1E	1420159_at 1420160_s_at 1428509_at 1449753_at 1449941_at	5106	1.115	0.0362	No
38	NR2F1	1418157_at 1422412_x_at	5170	1.105	0.0375	No
39	FGF7	1422243_at 1438405_at	5227	1.095	0.0391	No
40	CALD1	1424768_at 1424769_s_at 1424770_at 1433146_at 1433147_at 1458057_at	5396	1.065	0.0354	No
41	TADA3L	1417467_a_at 1448719_at	5432	1.058	0.0378	No
42	SRD5A2	1422960_at	5457	1.054	0.0406	No
43	MYL9	1452670_at	5511	1.047	0.0422	No
44	SVIL	1427662_at 1460694_s_at 1460735_at	5596	1.038	0.0422	No
45	CA3	1430584_s_at 1449434_at 1453588_at 1460256_at	5611	1.035	0.0455	No
46	HOXC4	1422870_at	5707	1.022	0.0450	No
47	CHST8	1428977_at	5977	0.990	0.0364	No
48	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	6042	0.981	0.0371	No
49	HOXB4	1451761_at 1460379_at	6336	0.937	0.0272	No
50	PDLIM7	1417959_at 1428319_at 1443785_x_at	6451	0.919	0.0254	No
51	MID1	1422055_at 1438239_at 1441929_at 1443666_at	6457	0.918	0.0287	No
52	NPAS2	1421036_at 1421037_at	6466	0.918	0.0318	No
53	MYL7	1449071_at	6545	0.907	0.0316	No
54	GGN	1445278_at	6768	0.875	0.0247	No
55	MYH11	1418122_at 1448962_at	7120	0.823	0.0117	No
56	CFL1	1448346_at 1455138_x_at	7194	0.814	0.0114	No
57	HOXC5	1439885_at 1450832_at 1456301_at	7560	0.768	-0.0025	No
58	SLC4A3	1418485_at 1453687_at	7749	0.743	-0.0083	No
59	ARPC4	1423588_at 1423589_at	7905	0.723	-0.0127	No
60	KRTCAP2	1417058_a_at 1417059_at	8074	0.699	-0.0178	No
61	MYLK	1425504_at 1425505_at 1425506_at	8088	0.697	-0.0158	No
62	PCDH7	1427592_at 1437442_at 1449249_at 1456214_at	8291	0.671	-0.0225	No
63	FOXE3	1422393_at	8650	0.627	-0.0366	No
64	FOSB	1422134_at	8652	0.626	-0.0343	No
65	KCNA1	1417416_at 1437230_at 1442413_at 1455785_at	8695	0.622	-0.0339	No
66	ANXA6	1415818_at 1429246_a_at 1429247_at 1442288_at	8783	0.612	-0.0355	No
67	MAPK14	1416703_at 1416704_at 1426104_at 1442364_at 1451927_a_at 1459617_at	9038	0.581	-0.0450	No
68	NPPA	1456062_at	9067	0.578	-0.0441	No
69	ACTB	1419734_at 1436722_a_at 1440365_at AFFX-b-ActinMur/M12481_3_at AFFX-b-ActinMur/M12481_5_at AFFX-b-ActinMur/M12481_M_at	9244	0.557	-0.0501	No
70	DLL1	1419204_at	9473	0.531	-0.0586	No
71	FGFRL1	1447878_s_at 1451912_a_at	9657	0.509	-0.0651	No
72	NFATC4	1423380_s_at 1432821_at 1454369_a_at	9808	0.492	-0.0701	No
73	TAGLN	1423505_at	10010	0.469	-0.0776	No
74	HOXB5	1418415_at	10060	0.462	-0.0781	No
75	CALN1	1425846_a_at	10165	0.452	-0.0812	No
76	LRRTM4	1437214_at 1455937_at	10181	0.451	-0.0801	No
77	ITGB6	1422983_at 1432281_a_at	10393	0.428	-0.0882	No
78	RAI2	1452358_at	10396	0.428	-0.0867	No
79	GADD45G	1453851_a_at	10515	0.417	-0.0906	No
80	CTNND1	1422450_at 1437448_s_at 1445830_at	10571	0.412	-0.0915	No
81	STARD13	1452604_at	10618	0.406	-0.0921	No
82	WNT3	1450763_x_at	10796	0.385	-0.0988	No
83	PODN	1435180_at	11171	0.343	-0.1147	No
84	TRDN	1426134_at 1426142_a_at 1426143_at 1426144_x_at 1451801_at 1451940_x_at	11381	0.319	-0.1231	No
85	TIMP3	1419088_at 1419089_at 1449334_at 1449335_at	11427	0.313	-0.1240	No
86	MRGPRF	1425894_at	11622	0.292	-0.1318	No
87	SDPR	1416778_at 1416779_at 1443832_s_at	11774	0.274	-0.1377	No
88	MLLT7	1422149_at	11962	0.255	-0.1453	No
89	CXCL5	1419728_at	12125	0.239	-0.1519	No
90	RHOJ	1418892_at 1444982_at	12559	0.193	-0.1710	No
91	CRH	1457984_at	12716	0.174	-0.1776	No
92	DIXDC1	1425256_a_at 1435207_at 1443957_at 1444395_at	12874	0.156	-0.1842	No
93	ABR	1433477_at	12915	0.151	-0.1855	No
94	HOXD10	1418606_at	12998	0.142	-0.1887	No
95	PPP1R12A	1429487_at 1437734_at 1437735_at 1444762_at 1444834_at 1453163_at	13142	0.124	-0.1948	No
96	CFL2	1418066_at 1418067_at 1431432_at	13211	0.117	-0.1975	No
97	TNMD	1417979_at	13245	0.113	-0.1986	No
98	CITED2	1417129_a_at 1421267_a_at 1439915_at 1440091_at 1443561_at 1443926_at 1445638_at 1446176_at 1447861_x_at 1457632_s_at 1459301_at	13510	0.080	-0.2104	No
99	ABCA1	1421839_at 1421840_at 1450392_at	13514	0.080	-0.2102	No
100	SLC16A6	1417884_at	13574	0.072	-0.2127	No
101	THRAP1	1436904_at 1438725_at 1444068_at 1446840_at 1453160_at 1453161_at	13689	0.055	-0.2177	No
102	CDC25B	1421963_a_at	13819	0.038	-0.2235	No
103	NRXN3	1419825_at 1431153_at 1432931_at 1433788_at 1438193_at 1439629_at 1442423_at 1444700_at 1456137_at 1460101_at	13858	0.032	-0.2251	No
104	CACNA1B	1425812_a_at 1436602_x_at 1439612_at 1460608_at	13956	0.021	-0.2295	No
105	MYADM	1423321_at 1439389_s_at	14048	0.008	-0.2337	No
106	TRIM46	1460568_at	14247	-0.021	-0.2427	No
107	RARB	1454906_at	14483	-0.055	-0.2533	No
108	PLN	1423359_at 1450952_at 1460332_at	14635	-0.080	-0.2599	No
109	BNC2	1438861_at 1440593_at 1459132_at	14799	-0.104	-0.2670	No
110	EFHD1	1448507_at	15164	-0.164	-0.2831	No
111	LCP1	1415983_at 1448160_at	15199	-0.170	-0.2840	No
112	NKX2-2	1421112_at	15245	-0.177	-0.2854	No
113	GPR20	1440021_at	15351	-0.195	-0.2895	No
114	TGFB1I1	1418136_at	15377	-0.199	-0.2899	No
115	CSRP1	1425810_a_at 1425811_a_at	15507	-0.222	-0.2950	No
116	CASQ1	1422598_at	15522	-0.225	-0.2948	No
117	ITGB8	1436223_at	15727	-0.265	-0.3032	No
118	OTX1	1437601_at	15758	-0.273	-0.3035	No
119	MRPS21	1422451_at	15815	-0.284	-0.3050	No
120	TPM3	1427260_a_at 1427567_a_at 1436958_x_at 1449996_a_at 1449997_at	15860	-0.293	-0.3060	No
121	FOXP2	1422014_at 1438231_at 1438232_at 1440108_at 1441365_at 1458191_at	15939	-0.310	-0.3084	No
122	LPP	1425673_at 1436714_at 1437235_x_at 1438271_at 1440167_s_at 1454899_at 1455314_at	16047	-0.335	-0.3120	No
123	ELAVL4	1428741_at 1450258_a_at 1452894_at 1457399_at	16243	-0.381	-0.3195	No
124	ACTA1	1427735_a_at	16285	-0.393	-0.3199	No
125	PRM1	1415955_x_at 1437054_x_at 1439379_x_at	16382	-0.416	-0.3228	No
126	ATF4	1438992_x_at 1439258_at 1448135_at	16468	-0.438	-0.3250	No
127	RIMS1	1435667_at 1438305_at 1444393_at	16849	-0.543	-0.3405	No
128	PPP2R3A	1455198_a_at	16897	-0.561	-0.3405	No
129	MAP1A	1460566_at	17011	-0.598	-0.3434	No
130	PRKAB2	1435874_at 1435875_at 1442001_at	17239	-0.676	-0.3513	No
131	MYL6	1435041_at	17385	-0.731	-0.3552	No
132	TANK	1421640_a_at 1441513_at 1459668_at	17455	-0.760	-0.3555	No
133	CSDA	1435800_a_at 1451012_a_at	17548	-0.798	-0.3567	No
134	MITF	1422025_at 1455214_at	17602	-0.821	-0.3561	No
135	MAP2K6	1426850_a_at 1459292_at	17943	-0.963	-0.3681	No
136	SLC2A4	1415958_at 1415959_at	17966	-0.969	-0.3654	No
137	FOXP1	1421140_a_at 1421141_a_at 1421142_s_at 1435222_at 1438802_at 1443258_at 1446280_at 1447209_at 1455242_at 1456851_at	18249	-1.059	-0.3744	No
138	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	18474	-1.157	-0.3803	Yes
139	VCL	1416156_at 1416157_at 1445256_at	18558	-1.197	-0.3796	Yes
140	H2AFX	1416746_at	18643	-1.234	-0.3788	Yes
141	RASSF2	1428392_at 1444889_at	18665	-1.246	-0.3750	Yes
142	PFN1	1449018_at	18754	-1.291	-0.3742	Yes
143	COL23A1	1429209_at 1429210_at 1440911_at	18786	-1.316	-0.3707	Yes
144	ACTG2	1422340_a_at	18831	-1.341	-0.3676	Yes
145	ACTR3	1426392_a_at 1434968_a_at 1452051_at	18862	-1.353	-0.3639	Yes
146	H3F3A	1423263_at 1442087_at	18876	-1.361	-0.3594	Yes
147	STAT5B	1422102_a_at 1422103_a_at	18936	-1.397	-0.3568	Yes
148	TAF5L	1448195_at	18968	-1.417	-0.3529	Yes
149	DUSP10	1417163_at 1417164_at	19106	-1.503	-0.3535	Yes
150	BLOC1S1	1422614_s_at	19141	-1.525	-0.3493	Yes
151	SRF	1418255_s_at 1418256_at	19149	-1.533	-0.3438	Yes
152	PHF12	1434922_at 1453579_at	19421	-1.717	-0.3498	Yes
153	CHD2	1444246_at 1445843_at	19439	-1.734	-0.3440	Yes
154	NRAS	1422688_a_at 1454060_a_at	19506	-1.778	-0.3403	Yes
155	ACTN1	1427385_s_at 1428585_at 1452415_at	19571	-1.843	-0.3363	Yes
156	PICALM	1441328_at 1443218_at 1446968_at 1451316_a_at 1455773_at	19635	-1.899	-0.3320	Yes
157	ARF6	1418822_a_at 1418823_at 1418824_at	19821	-2.038	-0.3328	Yes
158	PELI2	1419006_s_at 1436966_at 1437181_at	20007	-2.182	-0.3331	Yes
159	SGK	1416041_at	20162	-2.325	-0.3314	Yes
160	LDB1	1452024_a_at	20278	-2.445	-0.3274	Yes
161	DGKG	1419756_at 1431167_at 1449584_at	20599	-2.861	-0.3314	Yes
162	RUNDC1	1454829_at	20731	-3.063	-0.3258	Yes
163	TAZ	1416207_at 1453785_at	20760	-3.112	-0.3153	Yes
164	RERE	1454670_at	20895	-3.377	-0.3087	Yes
165	MUS81	1431885_a_at 1450432_s_at	20950	-3.491	-0.2980	Yes
166	FOS	1423100_at	20955	-3.496	-0.2850	Yes
167	IER2	1416442_at	21128	-3.863	-0.2783	Yes
168	JMJD1A	1426810_at	21153	-3.908	-0.2647	Yes
169	VASP	1451097_at	21184	-3.984	-0.2510	Yes
170	DUSP5	1437199_at	21194	-4.012	-0.2363	Yes
171	FLNA	1426677_at	21289	-4.293	-0.2244	Yes
172	CNN2	1450981_at	21334	-4.516	-0.2093	Yes
173	ERBB2IP	1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at	21501	-5.169	-0.1974	Yes
174	JUNB	1415899_at	21503	-5.184	-0.1779	Yes
175	UBE2H	1418631_at 1418632_at 1428791_at 1438971_x_at 1447374_at 1459930_at	21568	-5.574	-0.1598	Yes
176	KCNH2	1449544_a_at	21662	-6.212	-0.1406	Yes
177	CDKN1B	1419497_at 1434045_at	21856	-7.819	-0.1199	Yes
178	EGR1	1417065_at	21860	-7.832	-0.0905	Yes
179	EGR2	1427682_a_at 1427683_at	21904	-8.113	-0.0618	Yes
180	EGR3	1421486_at 1436329_at	21913	-8.258	-0.0310	Yes
181	SLC25A4	1424562_a_at 1424563_at 1434897_a_at 1455069_x_at	21926	-8.476	0.0005	Yes