Details for gene set V$PR

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$PR_Q2
Enrichment Score (ES)	-0.4152731
Normalized Enrichment Score (NES)	-1.6464723
Nominal p-value	0.0
FDR q-value	0.11953462
FWER p-Value	0.334

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	NOTCH1	1418633_at 1418634_at	108	7.277	0.0227	No
2	MRPS18B	1451164_a_at	229	5.700	0.0389	No
3	CDC42EP4	1416511_a_at 1436801_x_at	281	5.326	0.0568	No
4	TNNI1	1450813_a_at	451	4.540	0.0663	No
5	MT2A	1428942_at	962	3.236	0.0552	No
6	MRPL14	1451307_at	1134	2.982	0.0587	No
7	NFIL3	1418932_at	1135	2.978	0.0700	No
8	SYP	1448280_at 1456249_x_at	1762	2.334	0.0501	No
9	DLX1	1449470_at	1826	2.279	0.0559	No
10	PDHA2	1450962_at	2234	1.990	0.0448	No
11	AHSG	1455093_a_at	2516	1.829	0.0388	No
12	RBMS3	1436937_at 1436938_at 1441680_at 1443204_at 1446047_at	2633	1.775	0.0403	No
13	CDH6	1450288_at	3483	1.479	0.0069	No
14	OBSCN	1443632_at	3542	1.461	0.0098	No
15	KCNK3	1425341_at 1425342_a_at 1426058_a_at	3737	1.397	0.0062	No
16	HMGCS1	1433443_a_at 1433444_at 1433445_x_at 1433446_at 1441536_at	4158	1.296	-0.0082	No
17	KCNIP1	1416785_at 1433156_at 1448459_at 1454504_at	4166	1.294	-0.0036	No
18	CTGF	1416953_at	4338	1.260	-0.0067	No
19	KCNJ1	1418613_at 1418614_at	4472	1.236	-0.0081	No
20	OTP	1422285_at	4483	1.234	-0.0038	No
21	RNF128	1418318_at 1449036_at	4517	1.228	-0.0007	No
22	BMP10	1421763_at	4520	1.228	0.0039	No
23	LOX	1416121_at 1437903_at 1448228_at	4610	1.210	0.0044	No
24	RHEBL1	1447818_x_at 1451516_at	4737	1.184	0.0031	No
25	FMO1	1417429_at	4770	1.177	0.0061	No
26	GRM3	1430136_at	5105	1.115	-0.0050	No
27	NR2F1	1418157_at 1422412_x_at	5170	1.105	-0.0037	No
28	SRGAP1	1431719_a_at	5319	1.078	-0.0064	No
29	APBA2BP	1431946_a_at 1447907_x_at	5380	1.068	-0.0051	No
30	HMGN2	1433507_a_at	5478	1.051	-0.0056	No
31	PARC	1427620_at 1439866_at	5585	1.039	-0.0065	No
32	PDE4D	1443289_at 1458212_at 1459289_at 1459311_at	5743	1.017	-0.0098	No
33	RWDD1	1427913_at 1430242_at 1454241_at	5884	1.001	-0.0125	No
34	CAPN6	1421952_at 1450429_at	5895	0.999	-0.0091	No
35	RAB30	1426452_a_at	5946	0.994	-0.0076	No
36	GIPC2	1417178_at 1457330_at	5967	0.991	-0.0048	No
37	PDZRN4	1456512_at	6173	0.961	-0.0105	No
38	RGS3	1425701_a_at 1427648_at 1449516_a_at 1454026_a_at	6188	0.959	-0.0075	No
39	JPH1	1421520_at 1438428_at	6218	0.955	-0.0052	No
40	ELOVL6	1417403_at 1417404_at 1445062_at 1445578_at 1445641_at	6282	0.944	-0.0045	No
41	FOXA1	1418496_at	6383	0.930	-0.0056	No
42	ZDHHC22	1459723_at	6406	0.927	-0.0031	No
43	EYA2	1424127_at 1445755_at	6410	0.926	0.0003	No
44	WNT8B	1421439_at	6413	0.925	0.0037	No
45	JDP2	1424972_at 1450350_a_at	6589	0.899	-0.0009	No
46	HFE	1422645_at 1450702_at	6663	0.890	-0.0009	No
47	RAB39	1437762_at	6742	0.879	-0.0011	No
48	KCNC1	1423559_at 1443855_at 1456944_at	6806	0.869	-0.0007	No
49	FILIP1	1436650_at 1444075_at	7124	0.823	-0.0121	No
50	IRX4	1419539_at	7306	0.799	-0.0174	No
51	PDGFRA	1421916_at 1421917_at 1438946_at	7628	0.758	-0.0293	No
52	WNT9A	1425889_at 1436978_at	7629	0.758	-0.0264	No
53	PDC	1449179_at	8082	0.698	-0.0445	No
54	GRIA3	1420563_at 1434728_at	8160	0.687	-0.0454	No
55	SOX5	1423500_a_at 1432189_a_at 1432190_at 1440827_x_at 1446461_at 1452511_at 1459261_at	8288	0.671	-0.0487	No
56	HAPLN2	1420962_at 1420963_at	8356	0.662	-0.0493	No
57	SIX4	1425767_a_at 1427701_a_at 1439753_x_at 1456862_at	8753	0.615	-0.0651	No
58	USP54	1428731_at	8769	0.614	-0.0635	No
59	CAMLG	1417842_at	9007	0.586	-0.0721	No
60	CHST9	1431897_at	9356	0.544	-0.0861	No
61	SEMA3A	1420416_at 1420417_at 1449865_at	9379	0.541	-0.0850	No
62	ONECUT1	1421447_at 1450252_at 1456974_at	9665	0.508	-0.0962	No
63	PRRX1	1425526_a_at 1425527_at 1425528_at 1432129_a_at 1439774_at 1458004_at	9725	0.501	-0.0970	No
64	GABRA1	1421280_at 1421281_at 1436889_at 1455766_at	9875	0.485	-0.1020	No
65	BMPR2	1419616_at 1434310_at 1441652_at	9955	0.474	-0.1038	No
66	CACNA1G	1423365_at	9985	0.472	-0.1034	No
67	LRRTM4	1437214_at 1455937_at	10181	0.451	-0.1106	No
68	CACNA2D2	1426185_at	10233	0.445	-0.1113	No
69	CLDN10	1426147_s_at	10315	0.438	-0.1133	No
70	FCHSD2	1434260_at 1456949_at	10608	0.407	-0.1252	No
71	WNT3	1450763_x_at	10796	0.385	-0.1323	No
72	FGF10	1420690_at	10913	0.371	-0.1362	No
73	UBE3A	1416680_at 1416681_at 1416682_at 1425206_a_at 1431224_at 1445727_at	11133	0.347	-0.1450	No
74	SMPX	1418095_at	11189	0.341	-0.1462	No
75	HOXA5	1443803_x_at 1448926_at	11385	0.318	-0.1540	No
76	WWP2	1438482_at 1442162_at 1448145_at 1448146_at 1456714_at 1457499_at	11487	0.304	-0.1574	No
77	SERPINB12	1429297_at 1432173_at	11919	0.258	-0.1763	No
78	NR4A3	1421079_at 1421080_at	12109	0.240	-0.1840	No
79	GRIN2B	1422223_at 1431700_at	12124	0.239	-0.1838	No
80	GRM2	1431344_at 1435607_at	12246	0.227	-0.1885	No
81	DLX2	1448877_at	12359	0.214	-0.1928	No
82	IL23A	1419529_at	12481	0.201	-0.1976	No
83	SLC15A2	1417600_at 1424730_a_at 1447808_s_at	12805	0.164	-0.2118	No
84	NEXN	1435649_at 1446084_at	12923	0.150	-0.2166	No
85	VGF	1436094_at	13159	0.123	-0.2270	No
86	ZFHX1B	1422748_at 1434298_at 1442393_at 1445518_at 1454200_at 1456389_at	13171	0.121	-0.2270	No
87	PRDX6	1423223_a_at 1442878_at	13203	0.118	-0.2280	No
88	TNMD	1417979_at	13245	0.113	-0.2294	No
89	WNT2	1449425_at	13498	0.081	-0.2407	No
90	OPTC	1420578_at 1457138_x_at	13505	0.081	-0.2407	No
91	DTNA	1419223_a_at 1425292_at 1426066_a_at 1427588_a_at 1429768_at 1447280_at 1456069_at 1458908_at	13612	0.068	-0.2453	No
92	LEMD1	1445642_at	13742	0.047	-0.2510	No
93	NEK9	1424094_at 1460744_at	13868	0.031	-0.2567	No
94	NNAT	1423506_a_at	13913	0.025	-0.2586	No
95	RGN	1448852_at	14013	0.013	-0.2631	No
96	SCD	1415964_at 1415965_at	14196	-0.013	-0.2714	No
97	FGD4	1425037_at 1426041_a_at 1426042_at 1451659_at 1455337_at	14229	-0.018	-0.2728	No
98	BHLHB5	1418271_at	14254	-0.022	-0.2738	No
99	IL1RAPL1	1445821_at 1458964_at	14354	-0.036	-0.2783	No
100	BDNF	1422168_a_at 1422169_a_at	14372	-0.039	-0.2789	No
101	PAX3	1420389_at 1430335_a_at 1441743_at 1459148_at	14382	-0.040	-0.2791	No
102	IL1A	1421473_at	14640	-0.081	-0.2906	No
103	SCNN1A	1425088_at	14696	-0.089	-0.2928	No
104	CD24	1416034_at 1437502_x_at 1448182_a_at	14737	-0.094	-0.2943	No
105	HOXB8	1452493_s_at	14801	-0.104	-0.2968	No
106	CNTN4	1438782_at 1460321_at	14932	-0.126	-0.3023	No
107	RCN1	1417090_at 1447890_at	15027	-0.142	-0.3061	No
108	FOXC1	1419485_at 1419486_at	15213	-0.172	-0.3139	No
109	TYRO3	1425248_a_at 1425249_a_at	15300	-0.185	-0.3172	No
110	CTDSPL	1422510_at	15309	-0.187	-0.3168	No
111	MAP4K5	1427083_a_at 1427084_a_at 1427376_a_at 1440059_at 1445426_at 1446348_at 1447204_at	15348	-0.195	-0.3178	No
112	GPM6A	1426442_at 1456741_s_at 1459303_at	15422	-0.206	-0.3204	No
113	OTX1	1437601_at	15758	-0.273	-0.3348	No
114	TCF12	1421908_a_at 1427670_a_at 1438762_at 1439209_at 1439619_at 1443012_at 1444620_at 1445093_at 1445133_at 1457524_at 1458337_at	15793	-0.280	-0.3353	No
115	SHH	1427571_at 1436869_at	16016	-0.327	-0.3442	No
116	PANK1	1418715_at 1429813_at 1429814_at 1431028_a_at 1457110_at	16221	-0.374	-0.3522	No
117	NCDN	1416852_a_at 1416853_at	16724	-0.506	-0.3733	No
118	BRD4	1424922_a_at 1440078_at 1450711_at 1451870_a_at 1458708_at	16859	-0.547	-0.3774	No
119	PPP2R3A	1455198_a_at	16897	-0.561	-0.3770	No
120	DTX2	1421720_a_at 1439429_x_at	17000	-0.595	-0.3794	No
121	ZNRF2	1431154_at 1434016_at 1434017_at 1444735_at 1455290_at 1455291_s_at	17008	-0.596	-0.3775	No
122	GPM6B	1423091_a_at 1425942_a_at 1453514_at	17102	-0.625	-0.3794	No
123	NARG2	1426536_at 1426537_at	17193	-0.658	-0.3810	No
124	ADCY3	1421959_s_at 1421960_at 1436928_s_at 1436929_x_at 1440405_at 1444641_at	17279	-0.688	-0.3823	No
125	DGKH	1457213_a_at 1459906_at	17380	-0.729	-0.3841	No
126	TSGA10	1436045_at 1447283_at	17397	-0.735	-0.3820	No
127	ITGBL1	1425039_at	17452	-0.759	-0.3816	No
128	JMJD1C	1426900_at 1439998_at 1441592_at 1448049_at 1458521_at	17549	-0.798	-0.3830	No
129	BACE2	1416673_at 1435581_at 1437846_x_at 1438645_x_at	17634	-0.833	-0.3837	No
130	POLD4	1427885_at	17789	-0.900	-0.3873	No
131	MCC	1438081_at 1442741_at 1442892_at 1459524_at 1459752_at	17890	-0.944	-0.3884	No
132	RAB3C	1432415_at 1432432_a_at 1449494_at	17910	-0.952	-0.3856	No
133	SH3BP4	1416305_at 1455250_at	18132	-1.020	-0.3919	No
134	RAB1B	1424064_at	18323	-1.089	-0.3965	No
135	PRKAG1	1417690_at 1433533_x_at 1457803_at	18359	-1.102	-0.3939	No
136	EPHA2	1421151_a_at	18439	-1.140	-0.3932	No
137	ELMO1	1424523_at 1446610_at 1450208_a_at	18527	-1.182	-0.3927	No
138	SNAPC1	1429335_at	18678	-1.249	-0.3948	No
139	LBX1	1422323_a_at 1427400_at	18763	-1.297	-0.3937	No
140	TCN2	1441850_x_at 1444110_at 1447800_x_at 1447842_x_at 1448200_at 1457825_x_at	18813	-1.331	-0.3909	No
141	ESRRA	1442864_at 1460652_at	18992	-1.427	-0.3937	No
142	BCL9	1445859_at 1446767_at 1451574_at 1455565_at	19293	-1.622	-0.4013	No
143	CXCL14	1418456_a_at 1418457_at	19598	-1.869	-0.4082	Yes
144	PICALM	1441328_at 1443218_at 1446968_at 1451316_a_at 1455773_at	19635	-1.899	-0.4026	Yes
145	STIM1	1436945_x_at 1448320_at 1458460_at	19722	-1.973	-0.3990	Yes
146	LTBP3	1418049_at 1437833_at 1438312_s_at 1456189_x_at	19767	-2.001	-0.3934	Yes
147	SESN3	1449303_at 1453313_at	19865	-2.061	-0.3901	Yes
148	MAP2K1IP1	1416272_at	19918	-2.100	-0.3845	Yes
149	PGM2L1	1438774_s_at 1452841_at 1456478_at	19982	-2.161	-0.3791	Yes
150	CXCR4	1448710_at	20095	-2.256	-0.3757	Yes
151	ZDHHC5	1426310_at 1426311_s_at	20096	-2.257	-0.3671	Yes
152	CNOT2	1436980_x_at 1445017_at 1447212_at 1454602_s_at 1454603_a_at 1456576_x_at	20097	-2.257	-0.3585	Yes
153	CPEB4	1420617_at 1420618_at 1449931_at	20126	-2.293	-0.3511	Yes
154	PPP2R2A	1429715_at 1437730_at 1453260_a_at	20200	-2.367	-0.3454	Yes
155	TMEM24	1428095_a_at 1457585_at	20287	-2.457	-0.3400	Yes
156	ATOH7	1422929_s_at 1450796_at	20503	-2.735	-0.3395	Yes
157	CD96	1419226_at	20533	-2.776	-0.3303	Yes
158	PRG2	1422873_at	20545	-2.803	-0.3201	Yes
159	PON2	1425791_at 1429019_s_at 1429020_at 1450686_at	20556	-2.819	-0.3098	Yes
160	AMY2A	1457367_at	20632	-2.926	-0.3021	Yes
161	RERE	1454670_at	20895	-3.377	-0.3013	Yes
162	NUTF2	1434367_s_at 1447440_at 1449017_at	20898	-3.385	-0.2886	Yes
163	TAGAP	1460453_at	21047	-3.692	-0.2813	Yes
164	SSH2	1456153_at	21088	-3.758	-0.2688	Yes
165	KLF3	1421604_a_at 1429360_at 1431630_a_at 1441200_at 1442920_at 1454666_at	21160	-3.923	-0.2572	Yes
166	CPNE1	1433439_at	21177	-3.969	-0.2428	Yes
167	H2AFZ	1441370_at	21198	-4.032	-0.2284	Yes
168	UVRAG	1454706_at	21209	-4.054	-0.2134	Yes
169	USP52	1426700_a_at	21235	-4.128	-0.1989	Yes
170	PPP1R10	1426726_at 1426727_s_at 1430560_at	21251	-4.166	-0.1837	Yes
171	CACNB3	1448656_at	21292	-4.298	-0.1692	Yes
172	MXI1	1425732_a_at 1450376_at	21325	-4.477	-0.1536	Yes
173	RGL2	1450688_at	21366	-4.619	-0.1379	Yes
174	HIVEP1	1422742_at	21472	-5.027	-0.1236	Yes
175	ZBTB9	1429125_at	21496	-5.138	-0.1051	Yes
176	GRAP	1429387_at	21598	-5.745	-0.0878	Yes
177	PACS1	1420112_at 1435762_at 1440014_at 1449737_at 1459707_at	21651	-6.122	-0.0669	Yes
178	RAP2B	1417914_at 1417915_at 1439548_at 1448885_at	21680	-6.376	-0.0440	Yes
179	SSBP2	1429951_at 1438423_at 1449815_a_at 1451542_at	21731	-6.802	-0.0204	Yes
180	CDKN1B	1419497_at 1434045_at	21856	-7.819	0.0037	Yes