Details for gene set V$PEA3

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$PEA3_Q6
Enrichment Score (ES)	-0.40164423
Normalized Enrichment Score (NES)	-1.5989343
Nominal p-value	0.0
FDR q-value	0.101590276
FWER p-Value	0.501

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	RPS3	1435151_a_at 1447563_at 1455600_at	156	6.525	0.0143	No
2	INPPL1	1460394_a_at	349	4.975	0.0219	No
3	VDAC2	1415990_at	798	3.553	0.0130	No
4	FEN1	1421731_a_at 1436454_x_at	893	3.364	0.0198	No
5	ELOVL1	1425676_a_at 1443820_x_at 1455994_x_at 1456530_x_at	967	3.226	0.0271	No
6	LRFN4	1454700_at	1014	3.149	0.0353	No
7	POLR2L	1428296_at	1165	2.946	0.0382	No
8	ITPKB	1435272_at 1441058_at	1223	2.883	0.0450	No
9	SLAMF9	1419315_at	1284	2.815	0.0516	No
10	POU2AF1	1416957_at	1297	2.796	0.0602	No
11	TCIRG1	1420635_a_at	1322	2.769	0.0682	No
12	DPP3	1431594_at 1448215_a_at	1389	2.703	0.0741	No
13	SYTL1	1450240_a_at	1466	2.624	0.0793	No
14	ACSL5	1428082_at	1494	2.599	0.0866	No
15	RNASEL	1426603_at 1426604_at 1446458_at	1518	2.573	0.0940	No
16	MAPKAPK2	1426648_at	1668	2.413	0.0951	No
17	ELK4	1422233_at 1427162_a_at 1447571_at 1450549_s_at	1694	2.393	0.1019	No
18	FUCA1	1416109_at 1437772_s_at 1453805_at 1456155_x_at	1795	2.312	0.1049	No
19	TYSND1	1428689_at 1428690_at 1441856_x_at	1803	2.304	0.1122	No
20	ARF3	1421789_s_at 1423973_a_at 1434787_at 1437331_a_at 1456007_at	1876	2.237	0.1162	No
21	IL2RA	1420691_at 1420692_at	2087	2.083	0.1134	No
22	RUNX3	1421467_at 1440275_at	2183	2.019	0.1157	No
23	UNC93B1	1423768_at	2217	1.998	0.1208	No
24	FCGR3A	1425225_at 1448620_at	2236	1.990	0.1265	No
25	LTBR	1416435_at	2843	1.701	0.1043	No
26	SRRM1	1420934_a_at 1420935_a_at 1442330_at 1447447_s_at 1450045_at 1454689_at 1459828_at	2897	1.683	0.1074	No
27	IGSF4	1417376_a_at 1417377_at 1417378_at 1431611_a_at	2902	1.680	0.1128	No
28	SPI1	1418747_at	3021	1.634	0.1127	No
29	RPS6KA4	1438243_at 1448498_at	3178	1.576	0.1107	No
30	ADAMTS4	1452595_at	3293	1.544	0.1106	No
31	KAZALD1	1436528_at	3387	1.512	0.1113	No
32	LRMP	1448409_at	3671	1.417	0.1030	No
33	NCF2	1448561_at	3900	1.358	0.0970	No
34	HHEX	1423319_at	4156	1.297	0.0895	No
35	IRAK4	1421670_a_at 1451749_at	4345	1.260	0.0850	No
36	PLCB3	1448661_at	4500	1.231	0.0820	No
37	CTBP2	1422887_a_at 1439823_at	4501	1.231	0.0861	No
38	RIN1	1424507_at 1437460_x_at	4821	1.169	0.0753	No
39	SNCG	1417788_at	4904	1.153	0.0753	No
40	PTPRC	1422124_a_at 1440165_at	4964	1.140	0.0763	No
41	TAF5	1435474_at	5130	1.111	0.0724	No
42	SELP	1420558_at 1440173_x_at 1449906_at	5367	1.069	0.0651	No
43	IVL	1422222_at 1439878_at	5533	1.045	0.0610	No
44	MARK1	1419834_x_at 1425509_at 1425510_at 1425511_at 1449630_s_at	5675	1.025	0.0579	No
45	GPD1	1416204_at 1439396_x_at 1448249_at 1456732_at	5729	1.019	0.0588	No
46	RAB30	1426452_a_at	5946	0.994	0.0521	No
47	MFN2	1441424_at 1448131_at 1451900_at	6160	0.963	0.0455	No
48	PDZRN4	1456512_at	6173	0.961	0.0481	No
49	NDUFS2	1451096_at	6201	0.957	0.0500	No
50	BLNK	1451780_at	6620	0.895	0.0338	No
51	RAB39	1437762_at	6742	0.879	0.0311	No
52	PUM1	1423117_at 1456054_a_at 1460325_at	7074	0.830	0.0187	No
53	SPATA6	1418650_at 1418651_at 1438023_at 1445355_at	7338	0.795	0.0092	No
54	EPC1	1418850_at 1429914_at 1440198_at 1440742_at 1442279_at 1443675_at 1458315_at	7471	0.780	0.0057	No
55	LIN28	1437752_at	7823	0.734	-0.0080	No
56	CACNA1E	1421692_at	8060	0.701	-0.0166	No
57	CAMK1D	1426389_at 1438643_at 1452050_at	8322	0.666	-0.0264	No
58	MMP7	1449478_at	8398	0.657	-0.0276	No
59	TIAL1	1421148_a_at 1426352_s_at 1446713_at 1452821_at 1455675_a_at 1455676_x_at	8672	0.624	-0.0381	No
60	ANKRD1	1420991_at 1420992_at	8681	0.623	-0.0364	No
61	PAX6	1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at	8873	0.601	-0.0432	No
62	GPA33	1419330_a_at 1454247_a_at	9065	0.578	-0.0501	No
63	FUT11	1431066_at 1434123_at 1437748_at	9131	0.571	-0.0512	No
64	XPNPEP1	1422443_at	9343	0.546	-0.0591	No
65	IL18BP	1450424_a_at	9554	0.522	-0.0670	No
66	FGF23	1422176_at	9702	0.504	-0.0721	No
67	CPNE8	1430520_at 1430521_s_at 1431146_a_at	10242	0.444	-0.0954	No
68	PSD	1435780_at	10399	0.427	-0.1012	No
69	DMBT1	1418287_a_at	10449	0.422	-0.1021	No
70	SLC30A7	1450697_at	10469	0.421	-0.1015	No
71	LALBA	1418363_at	10487	0.419	-0.1009	No
72	TRIM8	1418577_at 1427593_at 1438679_at 1460237_at	11362	0.322	-0.1400	No
73	CD3E	1422105_at 1445748_at	11363	0.321	-0.1390	No
74	IL18	1417932_at	11779	0.273	-0.1572	No
75	VPS11	1428109_at 1428110_x_at 1441922_x_at 1452489_at	12036	0.248	-0.1681	No
76	ANK3	1425202_a_at 1439220_at 1447259_at 1451628_a_at 1457288_at	12084	0.242	-0.1695	No
77	GRIN2B	1422223_at 1431700_at	12124	0.239	-0.1705	No
78	EXTL2	1422538_at 1422539_at	12347	0.216	-0.1800	No
79	NT5C2	1417201_at 1425933_a_at 1442629_at 1443391_at 1448614_at	12658	0.182	-0.1936	No
80	ST7L	1427916_at 1456363_at	12681	0.180	-0.1940	No
81	GTF2H1	1453169_a_at	12811	0.164	-0.1994	No
82	VCAM1	1415989_at 1436003_at 1448162_at 1451314_a_at	13049	0.135	-0.2099	No
83	EHF	1419474_a_at 1419475_a_at 1447760_x_at 1451375_at	13156	0.123	-0.2143	No
84	PDGFD	1426319_at 1446691_at 1456532_at	13186	0.119	-0.2153	No
85	PRDX6	1423223_a_at 1442878_at	13203	0.118	-0.2156	No
86	CBL	1434829_at 1446608_at 1450457_at 1455886_at	13354	0.098	-0.2222	No
87	SLC35C1	1452139_at	13686	0.055	-0.2372	No
88	CYR61	1416039_x_at 1417848_at 1417849_at 1438133_a_at 1442340_x_at 1457823_at 1459462_at	13796	0.040	-0.2421	No
89	BDNF	1422168_a_at 1422169_a_at	14372	-0.039	-0.2684	No
90	MMRN2	1437123_at	14486	-0.057	-0.2734	No
91	NRP1	1418084_at 1448943_at 1448944_at 1457198_at	14625	-0.079	-0.2795	No
92	PAFAH2	1448489_at	14690	-0.088	-0.2821	No
93	SF1	1422321_a_at 1423750_a_at 1423751_at 1459765_s_at 1459766_x_at	14863	-0.116	-0.2896	No
94	GPR120	1439489_at	14986	-0.135	-0.2948	No
95	CDC14A	1436913_at 1443184_at 1446493_at 1459517_at	15251	-0.177	-0.3063	No
96	SV2A	1423406_at	15794	-0.280	-0.3303	No
97	SLC2A3	1421924_at 1427770_a_at 1437052_s_at 1455898_x_at	15868	-0.294	-0.3327	No
98	NUMA1	1423974_at 1423975_s_at 1441090_at 1444576_at 1444577_x_at	16121	-0.352	-0.3431	No
99	ELAVL4	1428741_at 1450258_a_at 1452894_at 1457399_at	16243	-0.381	-0.3474	No
100	CIAS1	1425412_at	16366	-0.412	-0.3517	No
101	SELL	1419480_at 1419481_at	16572	-0.465	-0.3596	No
102	C1ORF24	1422567_at 1454942_at	16669	-0.488	-0.3624	No
103	ZRANB1	1415712_at 1427200_at 1436228_at	16821	-0.535	-0.3676	No
104	DDX23	1430050_at	17072	-0.617	-0.3770	No
105	DCLRE1C	1457679_at 1458361_at	17293	-0.692	-0.3848	No
106	AKT3	1422078_at 1435260_at 1435879_at 1443222_at 1460307_at	17472	-0.767	-0.3905	No
107	MR1	1421898_a_at 1421899_a_at	17518	-0.785	-0.3900	No
108	LPXN	1424965_at	17633	-0.832	-0.3925	No
109	MICAL2	1438726_at 1455685_at	17667	-0.843	-0.3912	No
110	CREBL2	1435085_at 1442738_at	17700	-0.858	-0.3898	No
111	CTSS	1448591_at	17718	-0.867	-0.3878	No
112	ARHGAP20	1427522_at 1429918_at	17728	-0.870	-0.3853	No
113	POLD4	1427885_at	17789	-0.900	-0.3851	No
114	MARK2	1415952_at 1415953_s_at 1435889_at 1444303_at	17938	-0.960	-0.3887	No
115	ITPR2	1421678_at 1424833_at 1424834_s_at 1427287_s_at 1427693_at 1444418_at 1444551_at 1447328_at	18086	-1.008	-0.3922	No
116	KCNQ1	1441588_at 1442029_at 1446255_at 1447418_at 1449464_at 1457781_at 1459443_at	18293	-1.077	-0.3981	Yes
117	TCEB3	1422591_at 1434117_at 1450676_at	18294	-1.077	-0.3945	Yes
118	HIPK1	1421298_a_at 1424540_at 1457515_at	18311	-1.083	-0.3917	Yes
119	RAB1B	1424064_at	18323	-1.089	-0.3886	Yes
120	LZTS2	1426409_at	18353	-1.100	-0.3863	Yes
121	SSBP3	1425940_a_at 1427917_s_at 1439136_at 1443554_at 1457560_at 1458749_at	18365	-1.105	-0.3832	Yes
122	EPHA2	1421151_a_at	18439	-1.140	-0.3828	Yes
123	ZNF289	1439460_a_at 1448672_a_at	18448	-1.143	-0.3794	Yes
124	LAMC1	1423885_at 1423886_at	18507	-1.175	-0.3782	Yes
125	NCAM1	1421966_at 1425126_at 1426864_a_at 1426865_a_at 1439556_at 1440067_at 1441995_at 1442680_at 1443018_at 1450437_a_at 1450438_at 1454140_at	18579	-1.204	-0.3775	Yes
126	GAB2	1419829_a_at 1420785_at 1439786_at 1446860_at	18641	-1.233	-0.3762	Yes
127	CD53	1439589_at 1448617_at 1459744_at	18688	-1.256	-0.3742	Yes
128	SEC24C	1430250_at 1452147_at	18805	-1.326	-0.3752	Yes
129	NRGN	1423231_at	18881	-1.365	-0.3741	Yes
130	ESRRA	1442864_at 1460652_at	18992	-1.427	-0.3745	Yes
131	LAG3	1449911_at	18998	-1.433	-0.3700	Yes
132	IPO7	1442511_at 1454955_at 1458165_at	19024	-1.446	-0.3663	Yes
133	LCK	1425396_a_at 1439145_at 1439146_s_at 1457917_at	19071	-1.481	-0.3636	Yes
134	RHOG	1422572_at	19097	-1.498	-0.3598	Yes
135	HPS5	1434677_at	19308	-1.638	-0.3640	Yes
136	SLC41A1	1444511_at 1460565_at	19362	-1.672	-0.3610	Yes
137	BCL2L14	1424814_a_at 1429347_at	19389	-1.697	-0.3566	Yes
138	CAP1	1417461_at 1417462_at	19524	-1.797	-0.3568	Yes
139	PICALM	1441328_at 1443218_at 1446968_at 1451316_a_at 1455773_at	19635	-1.899	-0.3556	Yes
140	CAPZA1	1439455_x_at 1440380_at	19746	-1.993	-0.3541	Yes
141	TXNIP	1415996_at 1415997_at	19862	-2.057	-0.3526	Yes
142	CUGBP1	1423932_at 1425932_a_at 1426407_at 1426408_at 1427413_a_at	19934	-2.111	-0.3489	Yes
143	CENTD2	1428064_at	19949	-2.125	-0.3425	Yes
144	PGM2L1	1438774_s_at 1452841_at 1456478_at	19982	-2.161	-0.3369	Yes
145	ZDHHC5	1426310_at 1426311_s_at	20096	-2.257	-0.3346	Yes
146	XCL1	1419412_at	20131	-2.299	-0.3286	Yes
147	PIK4CB	1439197_at	20140	-2.306	-0.3214	Yes
148	TMEM24	1428095_a_at 1457585_at	20287	-2.457	-0.3200	Yes
149	CD84	1422875_at 1446505_at	20562	-2.824	-0.3233	Yes
150	PTPN6	1456694_x_at 1460188_at	20681	-2.991	-0.3188	Yes
151	GATA3	1448886_at	20751	-3.097	-0.3118	Yes
152	CMAS	1426662_at	20817	-3.229	-0.3042	Yes
153	SORL1	1426258_at 1445889_at 1453003_at 1460390_at	20849	-3.292	-0.2947	Yes
154	DGKZ	1426738_at 1452169_a_at	20864	-3.322	-0.2844	Yes
155	PRF1	1451862_a_at	20927	-3.438	-0.2759	Yes
156	KCNAB2	1416956_at 1425885_a_at	20990	-3.565	-0.2670	Yes
157	TNNI2	1416889_at 1438608_at 1438609_x_at	20998	-3.583	-0.2556	Yes
158	PBXIP1	1451132_at	21054	-3.699	-0.2459	Yes
159	ADRBK1	1426249_at 1451992_at	21080	-3.742	-0.2347	Yes
160	PRKACB	1420610_at 1420611_at 1457197_at	21102	-3.801	-0.2232	Yes
161	SLC43A1	1440007_at 1453255_at	21129	-3.865	-0.2116	Yes
162	SIPA1	1416206_at	21158	-3.919	-0.2000	Yes
163	ARHGDIB	1426454_at	21185	-3.986	-0.1880	Yes
164	DUSP5	1437199_at	21194	-4.012	-0.1752	Yes
165	GFI1	1417679_at	21247	-4.163	-0.1639	Yes
166	WASF2	1438683_at	21307	-4.361	-0.1522	Yes
167	RTN3	1418101_a_at 1425539_a_at 1442365_at 1443220_at	21408	-4.744	-0.1412	Yes
168	CD69	1428735_at	21459	-4.949	-0.1271	Yes
169	CTSW	1422632_at	21493	-5.132	-0.1118	Yes
170	ABLIM1	1442376_at 1453103_at 1454708_at 1460120_at	21522	-5.257	-0.0957	Yes
171	CD5	1418353_at	21674	-6.309	-0.0819	Yes
172	MAP4K2	1428297_at 1434833_at 1450244_a_at	21678	-6.348	-0.0611	Yes
173	ETV3	1418635_at 1418636_at 1445997_at 1456358_at	21760	-7.093	-0.0414	Yes
174	FLI1	1422024_at 1433512_at 1441584_at	21767	-7.169	-0.0181	Yes
175	CDKN2C	1416868_at 1439164_at	21857	-7.825	0.0036	Yes