Details for gene set V$NFKB_Q6

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$NFKB_Q6_01
Enrichment Score (ES)	-0.4850212
Normalized Enrichment Score (NES)	-1.9481484
Nominal p-value	0.0
FDR q-value	0.005146674
FWER p-Value	0.0070

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ARHGAP8	1451463_at	682	3.837	-0.0169	No
2	UACA	1452985_at	1176	2.932	-0.0285	No
3	TCEA2	1418107_at 1440791_x_at	1209	2.894	-0.0190	No
4	COL27A1	1429549_at 1453191_at	1454	2.641	-0.0203	No
5	SOCS2	1418507_s_at 1438470_at 1441476_at 1442586_at 1446085_at 1449109_at	1916	2.210	-0.0331	No
6	UNC84B	1433832_at 1439238_at	2002	2.144	-0.0289	No
7	IL2RA	1420691_at 1420692_at	2087	2.083	-0.0249	No
8	TRIM47	1426784_at	2223	1.994	-0.0236	No
9	TGIF	1422286_a_at	2490	1.843	-0.0289	No
10	GRIN2D	1421393_at	2675	1.760	-0.0307	No
11	CLCN1	1427591_at 1448082_at	2734	1.737	-0.0268	No
12	FGF17	1421523_at 1456239_at	2777	1.727	-0.0222	No
13	IGSF4	1417376_a_at 1417377_at 1417378_at 1431611_a_at	2902	1.680	-0.0216	No
14	SMPD3	1422779_at 1438665_at 1445759_at 1450748_at	2953	1.663	-0.0176	No
15	TP53	1426538_a_at 1427739_a_at 1438808_at 1457623_x_at 1459780_at 1459781_x_at	3061	1.619	-0.0164	No
16	ENO3	1417951_at 1449631_at	3066	1.617	-0.0105	No
17	ALG6	1439007_at 1459337_at	3578	1.451	-0.0285	No
18	BCL6B	1418421_at	3620	1.434	-0.0250	No
19	PTGES	1439747_at 1449449_at 1449450_at	3686	1.412	-0.0227	No
20	PTHLH	1422324_a_at 1427527_a_at	3701	1.409	-0.0180	No
21	ASCL3	1420780_at	3925	1.352	-0.0231	No
22	NDRG2	1448154_at	4161	1.295	-0.0290	No
23	CSF3	1419427_at	4220	1.284	-0.0269	No
24	HSD3B7	1416968_a_at 1442912_at	4453	1.238	-0.0329	No
25	BLR1	1422003_at	4777	1.176	-0.0433	No
26	EDN2	1449161_at	5203	1.099	-0.0586	No
27	GREM1	1425357_a_at	5216	1.096	-0.0551	No
28	PCBP4	1433658_x_at 1449054_a_at 1449055_x_at	5220	1.096	-0.0511	No
29	NR3C1	1421866_at 1421867_at 1453860_s_at 1457635_s_at 1460303_at	5433	1.058	-0.0568	No
30	IL12A	1425454_a_at	5641	1.030	-0.0624	No
31	FUT7	1420756_at	5671	1.026	-0.0599	No
32	SLC6A12	1449382_at	5898	0.999	-0.0665	No
33	UBE2D3	1423112_at 1423113_a_at 1423114_at 1450858_a_at 1450859_s_at 1455479_a_at 1455480_s_at	5934	0.995	-0.0644	No
34	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	6042	0.981	-0.0656	No
35	IL7	1422080_at 1436861_at	6202	0.956	-0.0693	No
36	GATA4	1418863_at 1418864_at 1441364_at	6287	0.944	-0.0696	No
37	RBMS1	1418703_at 1434005_at 1441437_at 1458578_at 1459968_at	6421	0.924	-0.0722	No
38	SP6	1427786_at 1427787_at 1437788_at 1442342_at	6447	0.919	-0.0699	No
39	CNTNAP1	1421580_at	6533	0.908	-0.0704	No
40	ZIC4	1421539_at 1456417_at	7003	0.839	-0.0888	No
41	TBX20	1422219_a_at 1425158_at 1453351_at	7202	0.812	-0.0948	No
42	MOBKL2C	1440919_at 1459919_a_at	7224	0.809	-0.0927	No
43	TCF1	1421234_at	7377	0.790	-0.0967	No
44	BAI2	1435558_at	7537	0.770	-0.1011	No
45	C1QL1	1422777_at	7651	0.755	-0.1035	No
46	GADD45B	1420197_at 1449773_s_at 1450971_at	7784	0.739	-0.1067	No
47	SOX5	1423500_a_at 1432189_a_at 1432190_at 1440827_x_at 1446461_at 1452511_at 1459261_at	8288	0.671	-0.1273	No
48	POU2F3	1450507_at	8333	0.665	-0.1268	No
49	HTR3B	1421652_at	8429	0.654	-0.1287	No
50	KLK9	1431681_at	8665	0.625	-0.1372	No
51	TNFRSF1B	1418099_at 1448951_at	8838	0.606	-0.1428	No
52	SHOX2	1420559_a_at 1438042_at	9392	0.540	-0.1661	No
53	IL13	1420802_at	9410	0.537	-0.1649	No
54	KRTAP13-1	1428007_at	9448	0.534	-0.1646	No
55	TNFSF7	1449926_at	9600	0.515	-0.1696	No
56	ANKHD1	1419867_a_at 1436597_at 1440754_at 1441597_at 1442641_at 1448008_at 1453023_at 1455759_a_at	9779	0.496	-0.1759	No
57	WNT10A	1460657_at	10065	0.462	-0.1872	No
58	CYLD	1429617_at 1429618_at 1445213_at	10365	0.433	-0.1994	No
59	CENTB5	1439021_at	10369	0.432	-0.1979	No
60	ETV1	1422607_at 1445314_at 1450684_at	10374	0.431	-0.1964	No
61	NFKBIB	1421266_s_at 1446718_at	10476	0.420	-0.1995	No
62	MADCAM1	1425253_a_at	10564	0.413	-0.2019	No
63	ERN1	1421240_at 1431886_at 1437119_at 1438583_at 1438997_at 1450176_at	10702	0.396	-0.2067	No
64	NTN1	1422987_at 1454974_at	10705	0.396	-0.2053	No
65	DGKI	1439986_at 1442813_at	10715	0.395	-0.2042	No
66	EBI3	1449222_at	11091	0.351	-0.2201	No
67	NEK8	1450337_a_at 1458157_at	11423	0.313	-0.2342	No
68	EGF	1418093_a_at	11531	0.301	-0.2379	No
69	PCSK2	1428305_at 1444147_at 1447991_at 1447992_s_at 1448312_at	11606	0.294	-0.2402	No
70	TSLP	1450004_at	11613	0.293	-0.2394	No
71	EDG5	1428176_at 1447880_x_at	11941	0.257	-0.2535	No
72	MSC	1418417_at	11985	0.252	-0.2545	No
73	JAK3	1425750_a_at 1446515_at	12294	0.222	-0.2678	No
74	IL23A	1419529_at	12481	0.201	-0.2756	No
75	RND1	1455197_at	12644	0.183	-0.2823	No
76	IL1RN	1423017_a_at 1425663_at 1451798_at	12787	0.166	-0.2882	No
77	DCAMKL1	1423125_at 1424270_at 1424271_at 1436659_at 1446190_at 1450863_a_at 1451289_at 1451917_a_at	12924	0.150	-0.2939	No
78	VCAM1	1415989_at 1436003_at 1448162_at 1451314_a_at	13049	0.135	-0.2991	No
79	AMOTL1	1428785_at 1431121_at 1446909_at 1455247_at	13058	0.134	-0.2990	No
80	DDR1	1415797_at 1415798_at 1435820_x_at 1437619_x_at 1438367_x_at 1439382_x_at 1456226_x_at 1459990_at	13074	0.132	-0.2992	No
81	RALGDS	1460634_at	13078	0.131	-0.2988	No
82	EHF	1419474_a_at 1419475_a_at 1447760_x_at 1451375_at	13156	0.123	-0.3019	No
83	GNG4	1417943_at 1417944_at 1447669_s_at	13231	0.115	-0.3048	No
84	PAPPA	1427633_a_at 1432591_at 1432592_at 1459375_at	13287	0.107	-0.3070	No
85	MSX1	1417127_at 1448601_s_at	13774	0.044	-0.3291	No
86	RIN2	1426368_at 1441209_at 1442829_at	13830	0.037	-0.3315	No
87	NLK	1419112_at 1435970_at 1443279_at 1445427_at 1456467_s_at	13996	0.016	-0.3390	No
88	GRK5	1446361_at 1446998_at 1449514_at	14266	-0.024	-0.3513	No
89	BDNF	1422168_a_at 1422169_a_at	14372	-0.039	-0.3560	No
90	DAP3	1450848_at	14419	-0.045	-0.3579	No
91	MAG	1460219_at	14655	-0.083	-0.3684	No
92	TRIB2	1426640_s_at 1426641_at 1459852_x_at	14691	-0.088	-0.3697	No
93	MAML2	1446570_at 1447546_s_at	14832	-0.110	-0.3757	No
94	SNAP25	1416828_at 1443398_at	14853	-0.114	-0.3762	No
95	PTPRJ	1425587_a_at 1425588_at 1427602_at 1427629_at 1443683_at 1455030_at	15352	-0.195	-0.3983	No
96	UPF2	1435030_at 1445777_at	15521	-0.225	-0.4052	No
97	ARHGEF2	1421042_at 1421043_s_at 1427646_a_at	15724	-0.265	-0.4135	No
98	BATF	1419410_at	15969	-0.317	-0.4235	No
99	IFNB1	1422305_at	16546	-0.456	-0.4482	No
100	GNB1	1417432_a_at 1425908_at 1454696_at 1459442_at	16693	-0.497	-0.4531	No
101	CREB1	1421582_a_at 1421583_at 1423402_at 1428755_at 1452529_a_at 1452901_at	17226	-0.671	-0.4750	No
102	REV3L	1424632_a_at 1426194_x_at 1451960_a_at	17346	-0.713	-0.4778	No
103	IER5	1417612_at 1417613_at	17447	-0.757	-0.4795	No
104	ASH1L	1420985_at 1441117_at 1450071_at 1450072_at	17568	-0.804	-0.4820	Yes
105	RAP2C	1428119_a_at 1437016_x_at 1460430_at	17572	-0.806	-0.4791	Yes
106	UBD	1419762_at	17574	-0.807	-0.4761	Yes
107	MITF	1422025_at 1455214_at	17602	-0.821	-0.4742	Yes
108	SEC61A1	1416189_a_at 1416190_a_at 1416191_at 1434986_a_at 1448242_at 1455987_at	17678	-0.849	-0.4745	Yes
109	FGF1	1423136_at 1441042_at 1450869_at	17775	-0.893	-0.4755	Yes
110	CHD4	1436343_at 1438476_a_at 1451295_a_at	17819	-0.912	-0.4741	Yes
111	PHOX2B	1422232_at 1455907_x_at	17830	-0.917	-0.4711	Yes
112	ATP1B1	1418453_a_at 1423890_x_at 1439036_a_at 1451152_a_at 1455949_at	17908	-0.951	-0.4710	Yes
113	GPHN	1426462_at 1426463_at 1430038_at 1444869_at 1445188_at 1458242_at	18074	-1.005	-0.4748	Yes
114	NFKBIA	1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at	18087	-1.008	-0.4715	Yes
115	ZBTB11	1454826_at	18099	-1.011	-0.4682	Yes
116	MMP9	1416298_at 1448291_at	18119	-1.017	-0.4653	Yes
117	ZNRF1	1420949_at 1420950_at 1424384_a_at	18151	-1.024	-0.4628	Yes
118	BMF	1422995_at 1454880_s_at 1458325_x_at	18237	-1.053	-0.4628	Yes
119	RASGRP4	1425380_at	18255	-1.061	-0.4596	Yes
120	PPP1R13B	1434895_s_at 1442956_at 1459224_at	18299	-1.081	-0.4575	Yes
121	SIN3A	1419101_at 1419102_at 1419900_at 1449343_s_at	18444	-1.142	-0.4598	Yes
122	ELMO1	1424523_at 1446610_at 1450208_a_at	18527	-1.182	-0.4591	Yes
123	NFKB2	1425902_a_at 1429128_x_at	18571	-1.202	-0.4565	Yes
124	IL4I1	1419192_at	18576	-1.204	-0.4522	Yes
125	RASSF2	1428392_at 1444889_at	18665	-1.246	-0.4515	Yes
126	PFN1	1449018_at	18754	-1.291	-0.4507	Yes
127	ICAM1	1424067_at	18780	-1.313	-0.4469	Yes
128	IL6ST	1421239_at 1437303_at 1452843_at 1460295_s_at	18798	-1.324	-0.4427	Yes
129	SLAMF8	1425294_at	18870	-1.357	-0.4408	Yes
130	DUSP22	1441723_at 1448985_at	19053	-1.465	-0.4437	Yes
131	EIF5A	1437859_x_at 1451470_s_at	19093	-1.496	-0.4398	Yes
132	RHOG	1422572_at	19097	-1.498	-0.4343	Yes
133	SIRT2	1423507_a_at	19099	-1.499	-0.4287	Yes
134	BMP2K	1421103_at 1437419_at 1458370_at	19397	-1.702	-0.4359	Yes
135	CHD6	1427384_at 1431047_at	19417	-1.715	-0.4303	Yes
136	ACTN1	1427385_s_at 1428585_at 1452415_at	19571	-1.843	-0.4304	Yes
137	SEMA3B	1416644_a_at 1431795_a_at 1448415_a_at	19610	-1.885	-0.4250	Yes
138	XPO6	1422759_a_at 1440492_at 1443737_at	19650	-1.913	-0.4196	Yes
139	BAZ2B	1435240_at 1440984_at 1441556_at 1442704_at 1442971_at 1445048_at 1448007_at 1458077_at	19668	-1.931	-0.4131	Yes
140	TOP1	1423474_at 1438495_at 1457573_at 1459672_at	19804	-2.024	-0.4117	Yes
141	UBE2I	1422712_a_at 1422713_a_at 1425478_x_at 1453189_at	19812	-2.030	-0.4043	Yes
142	ILK	1449942_a_at	19888	-2.075	-0.4000	Yes
143	NFAT5	1426029_a_at 1438999_a_at 1439328_at 1439805_at 1448966_a_at 1451921_a_at 1458213_at	20219	-2.391	-0.4061	Yes
144	BCL3	1418133_at	20382	-2.577	-0.4038	Yes
145	LTA	1420353_at	20453	-2.655	-0.3970	Yes
146	MAP3K11	1450669_at	20460	-2.667	-0.3873	Yes
147	STAT6	1421708_a_at 1426353_at	20465	-2.672	-0.3774	Yes
148	MRPS6	1424440_at 1447585_s_at	20783	-3.159	-0.3800	Yes
149	RBPSUH	1418114_at 1438848_at 1446436_at 1448957_at 1454896_at	20930	-3.443	-0.3737	Yes
150	EP300	1434765_at	20959	-3.504	-0.3618	Yes
151	TNFRSF9	1421481_at 1428034_a_at 1460469_at	21014	-3.623	-0.3506	Yes
152	LTB	1419135_at	21037	-3.669	-0.3378	Yes
153	IL27RA	1449508_at	21212	-4.062	-0.3305	Yes
154	USP52	1426700_a_at	21235	-4.128	-0.3159	Yes
155	DUSP6	1415834_at	21252	-4.176	-0.3009	Yes
156	RFX5	1423103_at	21322	-4.463	-0.2873	Yes
157	AP1S2	1437998_at 1447903_x_at 1452657_at 1456252_x_at 1460036_at	21350	-4.568	-0.2713	Yes
158	RELB	1417856_at	21351	-4.570	-0.2540	Yes
159	CD69	1428735_at	21459	-4.949	-0.2403	Yes
160	TNIP1	1427689_a_at	21471	-5.027	-0.2218	Yes
161	HIVEP1	1422742_at	21472	-5.027	-0.2029	Yes
162	ZBTB9	1429125_at	21496	-5.138	-0.1846	Yes
163	UBE2H	1418631_at 1418632_at 1428791_at 1438971_x_at 1447374_at 1459930_at	21568	-5.574	-0.1668	Yes
164	CCL5	1418126_at	21570	-5.584	-0.1458	Yes
165	MAP4K2	1428297_at 1434833_at 1450244_a_at	21678	-6.348	-0.1268	Yes
166	SMOC1	1448321_at	21703	-6.526	-0.1033	Yes
167	PRKCD	1422847_a_at 1442256_at	21741	-6.917	-0.0789	Yes
168	TRAF4	1416571_at 1460642_at	21803	-7.427	-0.0537	Yes
169	FBXL12	1448420_a_at	21872	-7.865	-0.0271	Yes
170	BIRC3	1421392_a_at 1425223_at	21886	-7.963	0.0023	Yes