Details for gene set V$NFKB

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$NFKB_C
Enrichment Score (ES)	-0.3788015
Normalized Enrichment Score (NES)	-1.5474565
Nominal p-value	0.0
FDR q-value	0.09541468
FWER p-Value	0.712

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ARHGAP8	1451463_at	682	3.837	-0.0171	No
2	ECT2	1419513_a_at	839	3.479	-0.0113	No
3	UACA	1452985_at	1176	2.932	-0.0158	No
4	TCEA2	1418107_at 1440791_x_at	1209	2.894	-0.0065	No
5	PIGC	1424189_at 1424190_at	1341	2.754	-0.0022	No
6	PURG	1424970_at 1452029_a_at	1645	2.434	-0.0071	No
7	CGGBP1	1454641_at 1455658_at	1723	2.368	-0.0018	No
8	SOCS2	1418507_s_at 1438470_at 1441476_at 1442586_at 1446085_at 1449109_at	1916	2.210	-0.0024	No
9	UNC84B	1433832_at 1439238_at	2002	2.144	0.0017	No
10	IL2RA	1420691_at 1420692_at	2087	2.083	0.0056	No
11	TRIM47	1426784_at	2223	1.994	0.0068	No
12	FOXA3	1431900_a_at	2529	1.821	-0.0005	No
13	FOXD3	1422210_at	2613	1.783	0.0024	No
14	SEC14L2	1424530_at	2627	1.777	0.0084	No
15	CDC37	1416819_at 1416820_at	2632	1.776	0.0148	No
16	FOXD2	1450289_at	2635	1.775	0.0214	No
17	GRIN2D	1421393_at	2675	1.760	0.0261	No
18	CLCN1	1427591_at 1448082_at	2734	1.737	0.0299	No
19	HCFC1	1421972_s_at 1433736_at 1445688_at 1446868_at 1450439_at 1457875_at	2753	1.731	0.0356	No
20	FGF17	1421523_at 1456239_at	2777	1.727	0.0409	No
21	SMPD3	1422779_at 1438665_at 1445759_at 1450748_at	2953	1.663	0.0391	No
22	SMARCAD1	1435651_a_at 1440066_at 1452276_at	2963	1.659	0.0449	No
23	ENO3	1417951_at 1449631_at	3066	1.617	0.0462	No
24	COL11A2	1423578_at	3090	1.609	0.0511	No
25	SOX3	1435192_at 1450485_at	3170	1.578	0.0534	No
26	GNAO1	1421152_a_at 1448031_at 1460383_at	3203	1.566	0.0578	No
27	ALG6	1439007_at 1459337_at	3578	1.451	0.0460	No
28	PTGES	1439747_at 1449449_at 1449450_at	3686	1.412	0.0463	No
29	PTHLH	1422324_a_at 1427527_a_at	3701	1.409	0.0509	No
30	RAD18	1423318_at 1435826_at 1443954_at 1451928_a_at	3739	1.396	0.0544	No
31	CDH5	1422047_at 1433956_at	3777	1.387	0.0579	No
32	S100A10	1416762_at 1439348_at 1456642_x_at	3816	1.377	0.0613	No
33	PHF6	1430415_at 1453761_at 1454625_at	3824	1.376	0.0661	No
34	ASCL3	1420780_at	3925	1.352	0.0665	No
35	NDRG2	1448154_at	4161	1.295	0.0605	No
36	CTGF	1416953_at	4338	1.260	0.0571	No
37	HSD3B7	1416968_a_at 1442912_at	4453	1.238	0.0565	No
38	BLR1	1422003_at	4777	1.176	0.0460	No
39	DNAJA1	1416288_at 1437220_x_at 1445729_at 1459835_s_at 1460179_at	4912	1.152	0.0442	No
40	SCRT2	1440930_a_at 1440931_at 1446986_at 1457310_x_at	4977	1.136	0.0454	No
41	PCBP4	1433658_x_at 1449054_a_at 1449055_x_at	5220	1.096	0.0384	No
42	CCDC8	1444761_at	5273	1.087	0.0401	No
43	HOXB6	1451660_a_at	5486	1.050	0.0342	No
44	FUT7	1420756_at	5671	1.026	0.0296	No
45	SLC6A12	1449382_at	5898	0.999	0.0229	No
46	BCKDK	1443813_x_at 1460644_at	6010	0.985	0.0215	No
47	HOXA11	1420414_at	6043	0.981	0.0237	No
48	GATA4	1418863_at 1418864_at 1441364_at	6287	0.944	0.0160	No
49	WRN	1425074_at 1425982_a_at 1450163_a_at	6346	0.935	0.0168	No
50	SP6	1427786_at 1427787_at 1437788_at 1442342_at	6447	0.919	0.0156	No
51	CHX10	1419628_at	6912	0.852	-0.0025	No
52	AGC1	1449827_at	6990	0.841	-0.0029	No
53	LAMB3	1417812_a_at	7042	0.834	-0.0022	No
54	MOBKL2C	1440919_at 1459919_a_at	7224	0.809	-0.0075	No
55	BAI2	1435558_at	7537	0.770	-0.0190	No
56	C1QL1	1422777_at	7651	0.755	-0.0213	No
57	GADD45B	1420197_at 1449773_s_at 1450971_at	7784	0.739	-0.0247	No
58	LIN28	1437752_at	7823	0.734	-0.0237	No
59	HOXB9	1452317_at	8253	0.676	-0.0409	No
60	CUEDC1	1425920_at 1435358_at 1443455_at 1451447_at	8268	0.674	-0.0390	No
61	SOX5	1423500_a_at 1432189_a_at 1432190_at 1440827_x_at 1446461_at 1452511_at 1459261_at	8288	0.671	-0.0374	No
62	ANP32A	1421918_at 1434555_at 1450407_a_at	8737	0.617	-0.0557	No
63	LRRFIP2	1436378_at 1436510_a_at	8822	0.607	-0.0573	No
64	IL13	1420802_at	9410	0.537	-0.0823	No
65	TNFSF7	1449926_at	9600	0.515	-0.0891	No
66	ANKHD1	1419867_a_at 1436597_at 1440754_at 1441597_at 1442641_at 1448008_at 1453023_at 1455759_a_at	9779	0.496	-0.0954	No
67	KCNQ5	1427426_at 1441071_at	9835	0.489	-0.0961	No
68	WNT10A	1460657_at	10065	0.462	-0.1049	No
69	CYLD	1429617_at 1429618_at 1445213_at	10365	0.433	-0.1171	No
70	CENTB5	1439021_at	10369	0.432	-0.1156	No
71	BHLHB2	1418025_at	10423	0.425	-0.1165	No
72	NFKBIB	1421266_s_at 1446718_at	10476	0.420	-0.1173	No
73	ARHGAP5	1423194_at 1450896_at 1450897_at 1457410_at	10545	0.414	-0.1189	No
74	VNN3	1420723_at	10679	0.399	-0.1235	No
75	LASP1	1438633_x_at 1438634_x_at 1439264_x_at 1444947_at 1448207_at 1455470_x_at 1456309_x_at 1456469_x_at 1456578_x_at 1460173_at	10691	0.397	-0.1225	No
76	TSNAXIP1	1427018_at	11115	0.349	-0.1407	No
77	SOX10	1424985_a_at 1425369_a_at 1451689_a_at	11397	0.316	-0.1524	No
78	EGF	1418093_a_at	11531	0.301	-0.1574	No
79	PCSK2	1428305_at 1444147_at 1447991_at 1447992_s_at 1448312_at	11606	0.294	-0.1598	No
80	TSLP	1450004_at	11613	0.293	-0.1589	No
81	RGL1	1418535_at 1440662_at 1449124_at	11802	0.271	-0.1666	No
82	EDG5	1428176_at 1447880_x_at	11941	0.257	-0.1720	No
83	MSC	1418417_at	11985	0.252	-0.1730	No
84	SYMPK	1428673_at	12203	0.231	-0.1821	No
85	JAK3	1425750_a_at 1446515_at	12294	0.222	-0.1854	No
86	PLA1A	1417785_at	12305	0.221	-0.1851	No
87	IL23A	1419529_at	12481	0.201	-0.1924	No
88	LCAT	1417043_at	12486	0.200	-0.1918	No
89	RND1	1455197_at	12644	0.183	-0.1984	No
90	TAL1	1449389_at	12666	0.181	-0.1986	No
91	IL1RN	1423017_a_at 1425663_at 1451798_at	12787	0.166	-0.2035	No
92	DCAMKL1	1423125_at 1424270_at 1424271_at 1436659_at 1446190_at 1450863_a_at 1451289_at 1451917_a_at	12924	0.150	-0.2092	No
93	VCAM1	1415989_at 1436003_at 1448162_at 1451314_a_at	13049	0.135	-0.2144	No
94	AMOTL1	1428785_at 1431121_at 1446909_at 1455247_at	13058	0.134	-0.2143	No
95	DDR1	1415797_at 1415798_at 1435820_x_at 1437619_x_at 1438367_x_at 1439382_x_at 1456226_x_at 1459990_at	13074	0.132	-0.2145	No
96	RALGDS	1460634_at	13078	0.131	-0.2142	No
97	EHF	1419474_a_at 1419475_a_at 1447760_x_at 1451375_at	13156	0.123	-0.2172	No
98	GNG4	1417943_at 1417944_at 1447669_s_at	13231	0.115	-0.2202	No
99	SLC34A3	1439519_at	13246	0.112	-0.2204	No
100	PAPPA	1427633_a_at 1432591_at 1432592_at 1459375_at	13287	0.107	-0.2219	No
101	SESN2	1425139_at 1451599_at	13330	0.101	-0.2234	No
102	PTGS2	1417262_at 1417263_at	13435	0.089	-0.2279	No
103	LCN2	1427747_a_at	13699	0.054	-0.2398	No
104	MSX1	1417127_at 1448601_s_at	13774	0.044	-0.2430	No
105	RIN2	1426368_at 1441209_at 1442829_at	13830	0.037	-0.2454	No
106	NLK	1419112_at 1435970_at 1443279_at 1445427_at 1456467_s_at	13996	0.016	-0.2530	No
107	GRK5	1446361_at 1446998_at 1449514_at	14266	-0.024	-0.2652	No
108	IL1RAPL1	1445821_at 1458964_at	14354	-0.036	-0.2691	No
109	BDNF	1422168_a_at 1422169_a_at	14372	-0.039	-0.2698	No
110	DAP3	1450848_at	14419	-0.045	-0.2717	No
111	OPCML	1435612_at 1442752_at 1457446_at 1458228_at	14441	-0.050	-0.2725	No
112	PPP2R5E	1428461_at 1428462_at 1428463_a_at 1439401_x_at 1443533_at 1443949_at 1446356_at 1452788_at	14554	-0.068	-0.2774	No
113	IL1A	1421473_at	14640	-0.081	-0.2810	No
114	MAG	1460219_at	14655	-0.083	-0.2813	No
115	TRIB2	1426640_s_at 1426641_at 1459852_x_at	14691	-0.088	-0.2826	No
116	SIX5	1427560_at	14750	-0.096	-0.2849	No
117	MAML2	1446570_at 1447546_s_at	14832	-0.110	-0.2882	No
118	SNAP25	1416828_at 1443398_at	14853	-0.114	-0.2887	No
119	CDK6	1435338_at 1440040_at 1455287_at 1460291_at	14894	-0.121	-0.2901	No
120	GABPB2	1440289_at 1440868_at 1443942_at 1453682_at 1455110_at	14930	-0.126	-0.2913	No
121	PLP1	1425467_a_at 1425468_at 1451718_at	15053	-0.146	-0.2963	No
122	ITGB4	1427387_a_at	15187	-0.168	-0.3018	No
123	CDC14A	1436913_at 1443184_at 1446493_at 1459517_at	15251	-0.177	-0.3041	No
124	TYRO3	1425248_a_at 1425249_a_at	15300	-0.185	-0.3056	No
125	PTPRJ	1425587_a_at 1425588_at 1427602_at 1427629_at 1443683_at 1455030_at	15352	-0.195	-0.3072	No
126	ZADH2	1451277_at	15439	-0.210	-0.3104	No
127	ARHGEF2	1421042_at 1421043_s_at 1427646_a_at	15724	-0.265	-0.3224	No
128	ITGB8	1436223_at	15727	-0.265	-0.3215	No
129	LYPLA2	1417433_at	15994	-0.322	-0.3326	No
130	EFNA3	1431170_at 1455344_at	16158	-0.359	-0.3387	No
131	CXCL10	1418930_at	16198	-0.369	-0.3392	No
132	IFNB1	1422305_at	16546	-0.456	-0.3534	No
133	LRCH1	1438032_at 1442502_at 1442757_at 1445396_at 1447746_at 1459150_at	16558	-0.460	-0.3522	No
134	MAP3K13	1430137_at 1440749_at 1447699_at	16696	-0.498	-0.3567	No
135	DACH2	1449823_at 1458012_at	16744	-0.513	-0.3569	No
136	JPH3	1418161_at 1443724_at	16805	-0.530	-0.3577	No
137	DDX17	1437773_x_at 1439037_at 1452155_a_at	16963	-0.583	-0.3627	No
138	IL18R1	1421628_at	17313	-0.698	-0.3762	Yes
139	RHOA	1437628_s_at	17319	-0.701	-0.3738	Yes
140	BCL11A	1419406_a_at 1426552_a_at 1446293_at 1447334_at 1447335_x_at 1453814_at 1456632_at	17391	-0.733	-0.3744	Yes
141	IER5	1417612_at 1417613_at	17447	-0.757	-0.3741	Yes
142	CD74	1425519_a_at	17456	-0.760	-0.3716	Yes
143	ID2	1422537_a_at 1435176_a_at 1453596_at	17499	-0.777	-0.3706	Yes
144	ASH1L	1420985_at 1441117_at 1450071_at 1450072_at	17568	-0.804	-0.3708	Yes
145	RAP2C	1428119_a_at 1437016_x_at 1460430_at	17572	-0.806	-0.3679	Yes
146	FGF1	1423136_at 1441042_at 1450869_at	17775	-0.893	-0.3739	Yes
147	CHD4	1436343_at 1438476_a_at 1451295_a_at	17819	-0.912	-0.3724	Yes
148	FOXJ2	1420373_at 1420374_at	17880	-0.936	-0.3717	Yes
149	PPP3CA	1426401_at 1438478_a_at 1440051_at 1452056_s_at 1458495_at	17912	-0.953	-0.3696	Yes
150	TCTA	1420123_at 1420124_s_at 1420125_at 1424068_at	17987	-0.975	-0.3693	Yes
151	GPHN	1426462_at 1426463_at 1430038_at 1444869_at 1445188_at 1458242_at	18074	-1.005	-0.3696	Yes
152	NFKBIA	1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at	18087	-1.008	-0.3663	Yes
153	GNA13	1422555_s_at 1422556_at 1430295_at 1433749_at 1446722_at 1450656_at 1453470_a_at 1460317_s_at	18114	-1.016	-0.3638	Yes
154	ARPC5	1444568_at 1448129_at	18190	-1.036	-0.3633	Yes
155	BMF	1422995_at 1454880_s_at 1458325_x_at	18237	-1.053	-0.3615	Yes
156	PPP1R13B	1434895_s_at 1442956_at 1459224_at	18299	-1.081	-0.3603	Yes
157	SIN3A	1419101_at 1419102_at 1419900_at 1449343_s_at	18444	-1.142	-0.3627	Yes
158	NFKB2	1425902_a_at 1429128_x_at	18571	-1.202	-0.3640	Yes
159	IL4I1	1419192_at	18576	-1.204	-0.3597	Yes
160	MAP3K8	1419208_at	18698	-1.260	-0.3606	Yes
161	PFN1	1449018_at	18754	-1.291	-0.3583	Yes
162	ICAM1	1424067_at	18780	-1.313	-0.3545	Yes
163	SLAMF8	1425294_at	18870	-1.357	-0.3536	Yes
164	BCL2L1	1420887_a_at 1420888_at 1426050_at 1426191_a_at	18903	-1.376	-0.3499	Yes
165	DUSP22	1441723_at 1448985_at	19053	-1.465	-0.3513	Yes
166	EIF5A	1437859_x_at 1451470_s_at	19093	-1.496	-0.3475	Yes
167	RHOG	1422572_at	19097	-1.498	-0.3421	Yes
168	SIRT2	1423507_a_at	19099	-1.499	-0.3365	Yes
169	MNT	1418192_at	19289	-1.619	-0.3392	Yes
170	SEMA3B	1416644_a_at 1431795_a_at 1448415_a_at	19610	-1.885	-0.3469	Yes
171	XPO6	1422759_a_at 1440492_at 1443737_at	19650	-1.913	-0.3415	Yes
172	RANBP10	1424584_a_at 1424585_at 1446446_at	19783	-2.009	-0.3401	Yes
173	TOP1	1423474_at 1438495_at 1457573_at 1459672_at	19804	-2.024	-0.3335	Yes
174	UBE2I	1422712_a_at 1422713_a_at 1425478_x_at 1453189_at	19812	-2.030	-0.3263	Yes
175	IRF1	1448436_a_at	19813	-2.030	-0.3187	Yes
176	BAHD1	1433703_s_at	19824	-2.039	-0.3115	Yes
177	NFAT5	1426029_a_at 1438999_a_at 1439328_at 1439805_at 1448966_a_at 1451921_a_at 1458213_at	20219	-2.391	-0.3208	Yes
178	BCL3	1418133_at	20382	-2.577	-0.3186	Yes
179	RAB10	1422664_at 1429296_at 1442463_at 1453095_at	20450	-2.653	-0.3118	Yes
180	STAT6	1421708_a_at 1426353_at	20465	-2.672	-0.3025	Yes
181	SNX15	1424337_at 1456649_at 1458021_at	20609	-2.879	-0.2983	Yes
182	NUP153	1441689_at 1441733_s_at 1452176_at	20656	-2.957	-0.2894	Yes
183	CCL22	1417925_at	20700	-3.021	-0.2801	Yes
184	TAZ	1416207_at 1453785_at	20760	-3.112	-0.2712	Yes
185	MRPS6	1424440_at 1447585_s_at	20783	-3.159	-0.2605	Yes
186	ZHX2	1455210_at	20896	-3.382	-0.2530	Yes
187	FOS	1423100_at	20955	-3.496	-0.2427	Yes
188	LTB	1419135_at	21037	-3.669	-0.2327	Yes
189	SLC43A1	1440007_at 1453255_at	21129	-3.865	-0.2225	Yes
190	IL27RA	1449508_at	21212	-4.062	-0.2111	Yes
191	USP52	1426700_a_at	21235	-4.128	-0.1967	Yes
192	TNIP1	1427689_a_at	21471	-5.027	-0.1888	Yes
193	CCL5	1418126_at	21570	-5.584	-0.1725	Yes
194	EPHB6	1418051_at	21691	-6.444	-0.1540	Yes
195	SMOC1	1448321_at	21703	-6.526	-0.1302	Yes
196	PRKCD	1422847_a_at 1442256_at	21741	-6.917	-0.1061	Yes
197	FLI1	1422024_at 1433512_at 1441584_at	21767	-7.169	-0.0805	Yes
198	RORC	1425792_a_at 1425793_a_at	21785	-7.272	-0.0542	Yes
199	EGR2	1427682_a_at 1427683_at	21904	-8.113	-0.0294	Yes
200	EGR3	1421486_at 1436329_at	21913	-8.258	0.0011	Yes