Details for gene set V$IK3

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$IK3_01
Enrichment Score (ES)	-0.44606608
Normalized Enrichment Score (NES)	-1.7671804
Nominal p-value	0.0
FDR q-value	0.032598265
FWER p-Value	0.084

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	XPO1	1418442_at 1418443_at 1448070_at	1151	2.956	-0.0390	No
2	SLC6A9	1417636_at 1431812_a_at	1228	2.875	-0.0290	No
3	RCOR2	1417302_at	1290	2.804	-0.0187	No
4	KCNA4	1422255_at 1438613_at	1365	2.724	-0.0093	No
5	MAP1LC3A	1447883_x_at 1451290_at	1394	2.700	0.0021	No
6	POLR2B	1433552_a_at	1508	2.583	0.0090	No
7	DHRS4	1419382_a_at 1451559_a_at	2311	1.946	-0.0187	No
8	MECP2	1438930_s_at 1449266_at 1460246_at	2719	1.743	-0.0292	No
9	FGF17	1421523_at 1456239_at	2777	1.727	-0.0238	No
10	CEPT1	1416471_at 1443090_at 1446410_at 1459406_at	2900	1.682	-0.0215	No
11	IGSF4	1417376_a_at 1417377_at 1417378_at 1431611_a_at	2902	1.680	-0.0137	No
12	GNAO1	1421152_a_at 1448031_at 1460383_at	3203	1.566	-0.0201	No
13	CYP17A1	1417017_at	3279	1.547	-0.0163	No
14	STARD8	1427072_at	3432	1.500	-0.0162	No
15	PPAP2B	1429514_at 1446850_at 1448908_at	3624	1.431	-0.0183	No
16	USH3A	1438347_at	3685	1.413	-0.0144	No
17	PTGES	1439747_at 1449449_at 1449450_at	3686	1.412	-0.0078	No
18	ASCL3	1420780_at	3925	1.352	-0.0124	No
19	FLNC	1424063_at 1447812_x_at 1449073_at	4115	1.305	-0.0150	No
20	RHBDF1	1424138_at	4201	1.288	-0.0128	No
21	SLC30A3	1460654_at	4242	1.281	-0.0087	No
22	CCDC3	1428549_at	4505	1.230	-0.0149	No
23	SYNPR	1423640_at 1444331_at	4860	1.160	-0.0258	No
24	MYT1	1422773_at 1439365_at	5233	1.094	-0.0377	No
25	JAG1	1421105_at 1421106_at 1434070_at	5350	1.072	-0.0380	No
26	CHAD	1420569_at	5355	1.072	-0.0332	No
27	RTN1	1429761_at	5653	1.028	-0.0420	No
28	CHST8	1428977_at	5977	0.990	-0.0522	No
29	HOXB4	1451761_at 1460379_at	6336	0.937	-0.0642	No
30	SP6	1427786_at 1427787_at 1437788_at 1442342_at	6447	0.919	-0.0650	No
31	SPINLW1	1420588_at	6777	0.873	-0.0760	No
32	LMO6	1439296_at	6834	0.866	-0.0745	No
33	SPIB	1460407_at	6839	0.864	-0.0706	No
34	FGF20	1421677_at	7158	0.820	-0.0814	No
35	RGS5	1420940_x_at 1420941_at	7167	0.818	-0.0779	No
36	PUNC	1423496_a_at 1439498_at 1444981_at	7238	0.807	-0.0774	No
37	PCF11	1427159_at 1427160_at 1428724_at 1456489_at	7334	0.795	-0.0780	No
38	ACE2	1425102_a_at 1425103_at 1452138_a_at	7435	0.783	-0.0789	No
39	AMBN	1449417_at	7585	0.764	-0.0822	No
40	NNMT	1432517_a_at	7626	0.759	-0.0805	No
41	C2	1416051_at 1441912_x_at 1457664_x_at	8157	0.688	-0.1016	No
42	NEDD1	1423196_at 1450899_at	8204	0.682	-0.1005	No
43	HOXB9	1452317_at	8253	0.676	-0.0995	No
44	BAI3	1446358_at 1454782_at	8639	0.628	-0.1143	No
45	SLIT3	1427086_at 1452296_at	8870	0.601	-0.1220	No
46	GABBR1	1422051_a_at 1425595_at 1437188_at 1455021_at	8985	0.588	-0.1245	No
47	IGFALS	1422826_at	9171	0.565	-0.1303	No
48	APBA1	1437940_at 1455369_at 1459605_at	9226	0.560	-0.1302	No
49	PROK2	1419681_a_at 1426176_a_at 1451952_at	9348	0.545	-0.1332	No
50	PPP2R2B	1426621_a_at	9357	0.544	-0.1310	No
51	SEMA3A	1420416_at 1420417_at 1449865_at	9379	0.541	-0.1294	No
52	LHX9	1419324_at 1431598_a_at 1441313_x_at	9469	0.531	-0.1310	No
53	NSD1	1420881_at 1435088_at 1440972_at 1456916_at	9674	0.507	-0.1380	No
54	PRRX1	1425526_a_at 1425527_at 1425528_at 1432129_a_at 1439774_at 1458004_at	9725	0.501	-0.1380	No
55	SLITRK1	1428089_at	9918	0.479	-0.1446	No
56	C1S	1424041_s_at	10299	0.439	-0.1599	No
57	PSD	1435780_at	10399	0.427	-0.1625	No
58	SALL1	1450489_at	10417	0.426	-0.1613	No
59	SERPINI1	1416702_at 1443756_at 1448443_at	10436	0.424	-0.1601	No
60	DNAH9	1442412_at 1457401_at	10438	0.423	-0.1582	No
61	VSNL1	1420955_at 1450055_at	10529	0.415	-0.1604	No
62	WNT3	1450763_x_at	10796	0.385	-0.1708	No
63	FGF10	1420690_at	10913	0.371	-0.1744	No
64	SLC38A5	1454622_at	10973	0.363	-0.1754	No
65	SMPX	1418095_at	11189	0.341	-0.1836	No
66	NAPG	1424069_at 1424070_at 1443366_at	11358	0.322	-0.1898	No
67	CD3E	1422105_at 1445748_at	11363	0.321	-0.1885	No
68	TIMP3	1419088_at 1419089_at 1449334_at 1449335_at	11427	0.313	-0.1899	No
69	POU4F2	1437588_at	11594	0.295	-0.1962	No
70	AMMECR1	1430697_at 1450546_at	11862	0.264	-0.2072	No
71	ADAM15	1416080_at 1425170_a_at 1438760_x_at 1454206_a_at	12041	0.247	-0.2142	No
72	ANK3	1425202_a_at 1439220_at 1447259_at 1451628_a_at 1457288_at	12084	0.242	-0.2150	No
73	GRIN2B	1422223_at 1431700_at	12124	0.239	-0.2157	No
74	CXCL5	1419728_at	12125	0.239	-0.2146	No
75	SH3BGRL2	1434109_at 1434211_at	12159	0.235	-0.2150	No
76	TAL1	1449389_at	12666	0.181	-0.2374	No
77	T	1419304_at	12791	0.165	-0.2423	No
78	SLC26A7	1425841_at	12850	0.159	-0.2442	No
79	EHF	1419474_a_at 1419475_a_at 1447760_x_at 1451375_at	13156	0.123	-0.2576	No
80	NHLH2	1436888_at	13166	0.122	-0.2575	No
81	HCST	1419119_at	13215	0.116	-0.2591	No
82	SIRT6	1429631_at	13426	0.091	-0.2683	No
83	ETV6	1423401_at 1434880_at 1444598_at 1457944_at	13474	0.085	-0.2701	No
84	MSX1	1417127_at 1448601_s_at	13774	0.044	-0.2836	No
85	CYR61	1416039_x_at 1417848_at 1417849_at 1438133_a_at 1442340_x_at 1457823_at 1459462_at	13796	0.040	-0.2844	No
86	RBBP9	1416174_at	13845	0.035	-0.2864	No
87	TMC4	1427178_at	13879	0.030	-0.2878	No
88	LMX1A	1421554_at	13954	0.021	-0.2911	No
89	CCL20	1422029_at	14330	-0.033	-0.3082	No
90	VAMP3	1421102_a_at 1433693_x_at 1433916_at 1437708_x_at 1456245_x_at 1457391_at	14447	-0.051	-0.3133	No
91	DCX	1418139_at 1418140_at 1418141_at 1448974_at	14494	-0.058	-0.3151	No
92	ACCN2	1455328_at	14596	-0.075	-0.3194	No
93	TRPM3	1439026_at 1441966_at 1443723_at 1445555_at 1456633_at 1456923_at 1457927_at	14598	-0.075	-0.3191	No
94	DNAJB8	1449223_at	14638	-0.081	-0.3205	No
95	MAG	1460219_at	14655	-0.083	-0.3209	No
96	SIX5	1427560_at	14750	-0.096	-0.3247	No
97	BNC2	1438861_at 1440593_at 1459132_at	14799	-0.104	-0.3264	No
98	TRAPPC3	1416771_at	14800	-0.104	-0.3260	No
99	CNTN4	1438782_at 1460321_at	14932	-0.126	-0.3314	No
100	UPP2	1460059_at	15009	-0.138	-0.3342	No
101	RAMP2	1418187_at	15016	-0.140	-0.3338	No
102	LIFR	1425107_a_at 1450207_at	15166	-0.164	-0.3399	No
103	TYRO3	1425248_a_at 1425249_a_at	15300	-0.185	-0.3451	No
104	HMGA2	1422851_at 1443394_at 1446196_at 1450780_s_at 1450781_at 1458241_at	15327	-0.192	-0.3454	No
105	SLC26A6	1416275_at	15520	-0.225	-0.3532	No
106	OTX1	1437601_at	15758	-0.273	-0.3628	No
107	KIFC3	1416199_at	15952	-0.313	-0.3702	No
108	MKNK2	1418300_a_at 1449029_at	16046	-0.335	-0.3729	No
109	RBX1	1416577_a_at 1416578_at 1438623_x_at 1440061_at 1447793_x_at 1448387_at	16650	-0.484	-0.3983	No
110	MAP3K13	1430137_at 1440749_at 1447699_at	16696	-0.498	-0.3981	No
111	TGIF2	1431115_at 1434400_at	16800	-0.529	-0.4003	No
112	SNX16	1424276_at 1438803_s_at 1456041_at	16808	-0.532	-0.3981	No
113	SFRS16	1428961_a_at	17137	-0.640	-0.4102	No
114	TCF8	1418926_at 1420243_at 1443005_at 1443203_at 1446127_at 1456686_at	17138	-0.641	-0.4072	No
115	PCDH10	1421311_at 1425563_s_at 1430667_at 1438134_at 1442565_at 1444301_at	17425	-0.746	-0.4168	No
116	CHRNB2	1420744_at 1436428_at 1441837_at	17430	-0.749	-0.4135	No
117	E2F4	1451480_at	17526	-0.787	-0.4142	No
118	HCN3	1451023_at	17635	-0.833	-0.4152	No
119	STAG2	1421849_at 1450396_at	17670	-0.846	-0.4128	No
120	MAP4K4	1422615_at 1440609_at 1448050_s_at 1459912_at	17705	-0.864	-0.4103	No
121	USP34	1434392_at 1434393_at 1444437_at 1446112_at 1460126_at	17953	-0.964	-0.4172	No
122	NFKBIA	1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at	18087	-1.008	-0.4186	No
123	CDK9	1417269_at 1457240_at	18094	-1.009	-0.4141	No
124	UBXD2	1426484_at 1426485_at 1426486_at	18623	-1.222	-0.4326	No
125	DIO2	1418937_at 1418938_at 1426081_a_at	18725	-1.275	-0.4313	No
126	SCML4	1427417_at 1427545_at 1440157_at	18913	-1.381	-0.4334	No
127	CBX8	1419198_at 1419199_at	19190	-1.562	-0.4387	Yes
128	EIF4A2	1450934_at	19237	-1.587	-0.4334	Yes
129	C7ORF10	1424597_at 1451404_at	19365	-1.676	-0.4314	Yes
130	PKP4	1438677_at 1452209_at	19386	-1.695	-0.4244	Yes
131	STARD3	1417405_at	19482	-1.762	-0.4205	Yes
132	USP25	1442104_at 1442826_at 1445116_at 1445861_at 1448939_at	19501	-1.774	-0.4130	Yes
133	ACTN1	1427385_s_at 1428585_at 1452415_at	19571	-1.843	-0.4075	Yes
134	TNFRSF21	1422740_at 1450731_s_at	19615	-1.887	-0.4007	Yes
135	AP1G2	1419113_at	19641	-1.906	-0.3929	Yes
136	BAZ2B	1435240_at 1440984_at 1441556_at 1442704_at 1442971_at 1445048_at 1448007_at 1458077_at	19668	-1.931	-0.3850	Yes
137	PPP1CB	1426205_at 1431328_at 1433540_x_at 1456462_x_at	19990	-2.169	-0.3896	Yes
138	MBNL2	1433754_at 1436858_at 1446475_at 1455827_at 1457237_at 1457477_at	20013	-2.188	-0.3803	Yes
139	OSBPL7	1428893_at 1459966_at	20379	-2.574	-0.3850	Yes
140	GATA3	1448886_at	20751	-3.097	-0.3876	Yes
141	PURA	1420628_at 1438219_at 1449934_at 1453783_at 1456898_at	20789	-3.168	-0.3744	Yes
142	RAB11B	1423448_at	20856	-3.296	-0.3620	Yes
143	MKL1	1434900_at	20933	-3.455	-0.3493	Yes
144	FOS	1423100_at	20955	-3.496	-0.3339	Yes
145	TNNI2	1416889_at 1438608_at 1438609_x_at	20998	-3.583	-0.3190	Yes
146	HECTD1	1424141_at 1438039_at	21007	-3.602	-0.3025	Yes
147	ARPC2	1437148_at 1442295_at	21139	-3.877	-0.2903	Yes
148	USP52	1426700_a_at	21235	-4.128	-0.2754	Yes
149	HIVEP1	1422742_at	21472	-5.027	-0.2626	Yes
150	MADD	1425735_at 1455502_at	21500	-5.159	-0.2397	Yes
151	RHOQ	1427918_a_at 1440925_at	21607	-5.827	-0.2173	Yes
152	EDEM1	1424065_at 1451218_at	21608	-5.834	-0.1899	Yes
153	KCNH2	1449544_a_at	21662	-6.212	-0.1632	Yes
154	WSB2	1421846_at 1421847_at 1438129_at	21676	-6.323	-0.1342	Yes
155	MTSS1	1424826_s_at 1434036_at 1440847_at 1443729_at 1446284_at 1451496_at	21776	-7.245	-0.1048	Yes
156	PDCD10	1437530_at 1448527_at 1448528_at	21854	-7.814	-0.0717	Yes
157	EGR1	1417065_at	21860	-7.832	-0.0353	Yes
158	EGR3	1421486_at 1436329_at	21913	-8.258	0.0011	Yes