Details for gene set V$E2F

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	V$E2F_Q6
Enrichment Score (ES)	0.3848922
Normalized Enrichment Score (NES)	1.5389274
Nominal p-value	0.0
FDR q-value	0.07250331
FWER p-Value	0.733

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CDCA7	1428069_at 1445681_at	17	9.326	0.0285	Yes
2	NOLC1	1428869_at 1428870_at 1450087_a_at	33	9.043	0.0561	Yes
3	POLA2	1425794_at 1448369_at 1456713_at	39	8.968	0.0840	Yes
4	MCM6	1416251_at 1438852_x_at 1447756_x_at	213	5.833	0.0944	Yes
5	MCM4	1416214_at 1436708_x_at	225	5.728	0.1118	Yes
6	NASP	1416042_s_at 1416043_at 1440328_at 1442728_at	307	5.145	0.1242	Yes
7	SNRPD1	1416336_s_at	311	5.135	0.1402	Yes
8	ATF5	1425927_a_at	327	5.060	0.1554	Yes
9	HNRPA1	1423531_a_at 1430020_x_at 1436549_a_at 1442758_at 1446038_at 1455305_x_at 1455740_at	358	4.955	0.1695	Yes
10	UNG	1425753_a_at	393	4.771	0.1829	Yes
11	GMNN	1417506_at	412	4.710	0.1969	Yes
12	RANBP1	1422547_at	415	4.703	0.2115	Yes
13	CDC6	1417019_a_at	461	4.496	0.2236	Yes
14	PRPS1	1416052_at	485	4.410	0.2363	Yes
15	RQCD1	1450887_at	727	3.714	0.2369	Yes
16	PHF5A	1424170_at	748	3.664	0.2475	Yes
17	RAD51	1418281_at	836	3.487	0.2544	Yes
18	EZH2	1416544_at 1444263_at	932	3.290	0.2604	Yes
19	CLSPN	1441984_at 1456280_at	979	3.211	0.2683	Yes
20	E2F3	1427462_at 1434564_at	989	3.187	0.2779	Yes
21	POLD1	1448187_at 1456055_x_at	1064	3.085	0.2842	Yes
22	DNAJC9	1426473_at	1079	3.052	0.2931	Yes
23	AK2	1448450_at 1448451_at	1145	2.961	0.2994	Yes
24	MRPL40	1448849_at	1162	2.949	0.3079	Yes
25	POLE2	1427094_at 1431440_at	1207	2.896	0.3150	Yes
26	CDT1	1424143_a_at 1424144_at 1455791_at	1225	2.881	0.3232	Yes
27	WEE1	1416773_at 1416774_at	1261	2.836	0.3305	Yes
28	UXT	1418986_a_at	1318	2.775	0.3366	Yes
29	UFD1L	1418087_at 1432367_a_at	1406	2.687	0.3411	Yes
30	POLE4	1423371_at 1423372_at 1432286_at 1444739_at	1592	2.489	0.3404	Yes
31	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	1610	2.476	0.3474	Yes
32	KPNB1	1416925_at 1434357_a_at 1448526_at 1451967_x_at	1733	2.357	0.3492	Yes
33	SLC9A5	1420070_a_at 1455760_at	1776	2.324	0.3545	Yes
34	PCNA	1417947_at	1885	2.232	0.3566	Yes
35	MCM8	1429557_at	2034	2.124	0.3564	Yes
36	NELL2	1423560_at 1423561_at	2135	2.050	0.3583	Yes
37	POLD3	1426838_at 1426839_at 1443733_x_at 1459647_at	2280	1.965	0.3578	Yes
38	MCM2	1434079_s_at 1448777_at	2322	1.939	0.3620	Yes
39	ING3	1422805_a_at 1422806_x_at 1450760_a_at 1460082_at	2337	1.930	0.3674	Yes
40	E2F1	1417878_at 1431875_a_at 1447840_x_at	2542	1.816	0.3637	Yes
41	NCL	1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at	2565	1.803	0.3684	Yes
42	HIRA	1436241_s_at 1450049_a_at 1450050_at 1459103_at	2681	1.757	0.3686	Yes
43	RBL1	1424156_at 1425166_at 1432604_at 1454293_at	2810	1.712	0.3681	Yes
44	SFRS10	1419543_a_at 1427432_a_at 1441466_at 1446496_at	2886	1.687	0.3699	Yes
45	PB1	1426877_a_at 1426878_at 1427266_at 1442603_at	2913	1.677	0.3740	Yes
46	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	3110	1.602	0.3700	Yes
47	MSH2	1416988_at 1447888_x_at	3123	1.597	0.3745	Yes
48	HS6ST3	1421599_at	3241	1.556	0.3740	Yes
49	AP4M1	1418846_at	3344	1.528	0.3741	Yes
50	HTF9C	1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at	3356	1.524	0.3784	Yes
51	ILF3	1422546_at 1436802_at 1460669_at	3451	1.494	0.3787	Yes
52	FANCD2	1430916_at 1438339_at 1439091_at 1442092_at	3590	1.448	0.3769	Yes
53	PCSK1	1421396_at	3617	1.435	0.3802	Yes
54	RRM2	1416120_at 1434437_x_at 1448226_at	3670	1.417	0.3823	Yes
55	DNAJC11	1433880_at 1433881_at 1439763_at 1446686_at 1447055_at	3800	1.381	0.3807	Yes
56	ARHGAP11A	1438434_at	3804	1.379	0.3849	Yes
57	GPRC5B	1424613_at 1451411_at	3998	1.333	0.3802	No
58	SYNGR4	1418875_at	4154	1.297	0.3772	No
59	SFRS7	1424033_at 1424883_s_at 1436871_at	4378	1.254	0.3708	No
60	PAQR4	1423101_at	4516	1.229	0.3684	No
61	STMN1	1415849_s_at	4840	1.165	0.3572	No
62	GSPT1	1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at	4997	1.133	0.3536	No
63	ZBTB4	1429722_at 1460488_at	5299	1.083	0.3432	No
64	SEMA5A	1422167_at 1434776_at 1437422_at 1446772_at 1446865_at 1446910_at 1459109_at	5306	1.081	0.3463	No
65	HMGN2	1433507_a_at	5478	1.051	0.3417	No
66	PKMYT1	1418481_at 1438601_at	5843	1.004	0.3282	No
67	HNRPD	1425142_a_at 1446083_at	5909	0.998	0.3283	No
68	JPH1	1421520_at 1438428_at	6218	0.955	0.3172	No
69	INSM1	1421399_at 1455865_at	6227	0.954	0.3198	No
70	EPHB1	1455188_at	6384	0.929	0.3155	No
71	EFNA5	1421796_a_at 1436866_at 1440052_at 1446383_at 1451930_at	6416	0.925	0.3170	No
72	SFRS12	1427134_at 1427135_at 1427136_s_at 1458056_at	6732	0.880	0.3053	No
73	POLR2A	1422311_a_at 1426242_at 1458710_at	7677	0.752	0.2643	No
74	SEMA6A	1421414_a_at 1425903_at 1436458_at	8262	0.675	0.2396	No
75	CORT	1449820_at	8399	0.657	0.2354	No
76	GABRB3	1421189_at 1421190_at 1435021_at	8493	0.646	0.2332	No
77	PAX6	1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at	8873	0.601	0.2177	No
78	TREX2	1449367_at	9751	0.499	0.1790	No
79	GRIA4	1421351_at 1435722_at 1436772_at 1440891_at 1443285_at 1458230_at 1460097_at	9827	0.490	0.1770	No
80	STK35	1431107_at 1439802_at	10204	0.448	0.1612	No
81	NRP2	1425433_a_at 1426528_at 1435349_at 1452552_at 1456778_at 1459256_at	10291	0.440	0.1586	No
82	FHOD1	1435557_at	10856	0.377	0.1339	No
83	ATAD2	1436174_at 1443146_at 1443229_at	11025	0.359	0.1273	No
84	PODN	1435180_at	11171	0.343	0.1217	No
85	RPS6KA5	1431050_at 1437625_at 1439004_at 1440343_at	11230	0.336	0.1201	No
86	SOAT1	1417695_a_at 1417696_at 1417697_at 1426818_at 1448068_at	11377	0.319	0.1144	No
87	HOXC10	1439798_at	11465	0.307	0.1114	No
88	CSPG2	1421694_a_at 1427256_at 1427257_at 1433043_at 1433044_at 1447586_at 1447887_x_at 1459767_x_at	11475	0.306	0.1119	No
89	SLC6A4	1417150_at	11509	0.303	0.1114	No
90	DNMT1	1422946_a_at 1435122_x_at 1445637_at 1447877_x_at	11510	0.303	0.1123	No
91	FBXO5	1429499_at	11714	0.283	0.1039	No
92	PHF15	1430081_at 1455345_at	11803	0.271	0.1007	No
93	PRPF4B	1425497_a_at 1425498_at 1436427_at 1451732_at 1451909_a_at 1455696_a_at	11806	0.271	0.1014	No
94	KCNA6	1421568_at 1441049_at 1456954_at	11885	0.263	0.0987	No
95	PVRL1	1438111_at 1438421_at 1440131_at 1446488_at 1450819_at	12794	0.165	0.0575	No
96	RAVER1	1427110_at 1427111_s_at 1444966_at	13088	0.130	0.0445	No
97	YBX2	1420762_a_at	13658	0.059	0.0185	No
98	KCND2	1422834_at 1422835_at 1446065_at 1447764_at 1450773_at 1459288_at	13807	0.039	0.0118	No
99	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	13992	0.016	0.0034	No
100	MYH10	1441057_at 1452740_at	14004	0.014	0.0030	No
101	RASAL2	1436910_at 1444671_at	14161	-0.007	-0.0042	No
102	ARHGAP6	1417704_a_at 1451867_x_at 1456333_a_at	14301	-0.029	-0.0105	No
103	SLC38A1	1415903_at 1454764_s_at	14604	-0.076	-0.0241	No
104	CTNND2	1422592_at 1438891_at 1443638_at 1445114_at 1447552_s_at 1456116_at	14716	-0.092	-0.0289	No
105	RHD	1417049_at	14804	-0.105	-0.0326	No
106	TOPBP1	1452241_at 1458480_at	15141	-0.160	-0.0475	No
107	TYRO3	1425248_a_at 1425249_a_at	15300	-0.185	-0.0542	No
108	DNAJC5G	1437814_at	15656	-0.250	-0.0697	No
109	PIM1	1423006_at 1435458_at	15787	-0.279	-0.0748	No
110	FMO4	1425799_at 1444852_at	16265	-0.386	-0.0955	No
111	MXD3	1422970_at 1438847_at 1448878_at	16289	-0.394	-0.0953	No
112	CASP8AP2	1449217_at	16798	-0.528	-0.1170	No
113	DDX17	1437773_x_at 1439037_at 1452155_a_at	16963	-0.583	-0.1227	No
114	CBX5	1421932_at 1421933_at 1421934_at 1450416_at 1454636_at 1459845_at	17080	-0.619	-0.1261	No
115	WHSC1L1	1442085_at 1447931_at 1455668_at 1457630_at 1457793_a_at 1457794_at 1459907_a_at	17191	-0.658	-0.1291	No
116	PPM1D	1434142_at 1449092_at 1459069_at	17196	-0.659	-0.1272	No
117	CDC25A	1417131_at 1417132_at 1445995_at	17222	-0.670	-0.1262	No
118	BRMS1L	1452850_s_at 1460443_at	17345	-0.711	-0.1296	No
119	EED	1448653_at	17407	-0.739	-0.1301	No
120	SUMO1	1438289_a_at 1444557_at 1451005_at 1456349_x_at	17594	-0.817	-0.1361	No
121	HCN3	1451023_at	17635	-0.833	-0.1353	No
122	STAG2	1421849_at 1450396_at	17670	-0.846	-0.1342	No
123	ACBD6	1452601_a_at 1453199_at	17693	-0.854	-0.1325	No
124	ADAMTS2	1435990_at 1455720_at 1457058_at	17774	-0.892	-0.1334	No
125	DDB2	1425706_a_at 1436680_s_at	18146	-1.023	-0.1472	No
126	PRKDC	1451576_at	18211	-1.043	-0.1469	No
127	ACO2	1436934_s_at 1442102_at 1451002_at	18268	-1.064	-0.1461	No
128	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	18474	-1.157	-0.1519	No
129	TMPO	1421237_at 1426020_at 1426349_s_at 1428976_at 1452036_a_at	18495	-1.167	-0.1492	No
130	IL4I1	1419192_at	18576	-1.204	-0.1491	No
131	CDC45L	1416575_at 1457838_at	18583	-1.205	-0.1456	No
132	IPO7	1442511_at 1454955_at 1458165_at	19024	-1.446	-0.1613	No
133	STAG1	1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at	19049	-1.462	-0.1578	No
134	USP37	1434242_at 1438212_at	19174	-1.552	-0.1586	No
135	CCNT1	1419313_at 1456477_at	19227	-1.582	-0.1560	No
136	PHF13	1455175_at	19317	-1.641	-0.1550	No
137	HNRPUL1	1451984_at	19393	-1.699	-0.1531	No
138	SP3	1431804_a_at 1459360_at	19471	-1.754	-0.1511	No
139	PPP1R8	1424554_at 1435821_s_at	19534	-1.815	-0.1483	No
140	PHC1	1423212_at	19605	-1.878	-0.1456	No
141	TBX6	1449868_at	19608	-1.881	-0.1398	No
142	ZCCHC8	1423755_at 1441639_at	19867	-2.062	-0.1452	No
143	MAZ	1427099_at	19890	-2.077	-0.1397	No
144	ALDH6A1	1448104_at	19964	-2.141	-0.1363	No
145	SLCO3A1	1418030_at 1434537_at 1448918_at	20008	-2.185	-0.1314	No
146	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	20198	-2.362	-0.1327	No
147	NUP62	1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at	20265	-2.430	-0.1281	No
148	DCK	1428838_a_at 1439012_a_at 1449176_a_at	20266	-2.433	-0.1205	No
149	HNRPR	1427129_a_at 1438807_at 1452030_a_at	20509	-2.740	-0.1230	No
150	NUP153	1441689_at 1441733_s_at 1452176_at	20656	-2.957	-0.1205	No
151	CTCF	1418330_at 1449042_at	20704	-3.033	-0.1131	No
152	RAB11B	1423448_at	20856	-3.296	-0.1097	No
153	E2F7	1437187_at	20960	-3.504	-0.1034	No
154	UGCGL1	1432318_at 1448009_at 1455839_at	21031	-3.660	-0.0952	No
155	H2AFZ	1441370_at	21198	-4.032	-0.0902	No
156	USP52	1426700_a_at	21235	-4.128	-0.0789	No
157	KBTBD7	1428192_at 1439865_at 1452700_s_at	21484	-5.084	-0.0743	No
158	ERBB2IP	1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at	21501	-5.169	-0.0588	No
159	PPP1CC	1440594_at	21604	-5.797	-0.0454	No
160	MCM3	1420029_at 1426653_at	21664	-6.234	-0.0285	No
161	ARID4A	1436191_at 1438464_at 1456420_at	21683	-6.386	-0.0093	No
162	ID3	1416630_at	21719	-6.663	0.0100	No