Details for gene set V$E2F

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	V$E2F_Q3
Enrichment Score (ES)	0.3798241
Normalized Enrichment Score (NES)	1.5091624
Nominal p-value	0.0020661156
FDR q-value	0.077625975
FWER p-Value	0.852

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CDCA7	1428069_at 1445681_at	17	9.326	0.0272	Yes
2	POLA2	1425794_at 1448369_at 1456713_at	39	8.968	0.0531	Yes
3	TCP1	1442317_at 1448122_at	127	6.951	0.0700	Yes
4	RBBP7	1415775_at 1456227_x_at	149	6.652	0.0890	Yes
5	MCM6	1416251_at 1438852_x_at 1447756_x_at	213	5.833	0.1036	Yes
6	MCM4	1416214_at 1436708_x_at	225	5.728	0.1202	Yes
7	SHMT1	1422198_a_at 1425177_at 1425178_s_at 1425179_at	238	5.565	0.1364	Yes
8	NASP	1416042_s_at 1416043_at 1440328_at 1442728_at	307	5.145	0.1487	Yes
9	HNRPA1	1423531_a_at 1430020_x_at 1436549_a_at 1442758_at 1446038_at 1455305_x_at 1455740_at	358	4.955	0.1613	Yes
10	UNG	1425753_a_at	393	4.771	0.1740	Yes
11	GMNN	1417506_at	412	4.710	0.1873	Yes
12	RANBP1	1422547_at	415	4.703	0.2013	Yes
13	CDC6	1417019_a_at	461	4.496	0.2127	Yes
14	PRPS1	1416052_at	485	4.410	0.2249	Yes
15	USP1	1423674_at 1423675_at 1451080_at	489	4.399	0.2380	Yes
16	IMPDH2	1415851_a_at 1415852_at	494	4.374	0.2509	Yes
17	CPNE5	1442166_at	564	4.160	0.2602	Yes
18	LIG1	1416641_at	606	4.015	0.2704	Yes
19	PCSK4	1425824_a_at	642	3.928	0.2805	Yes
20	MRPL18	1448373_at	656	3.892	0.2916	Yes
21	RAD51	1418281_at	836	3.487	0.2939	Yes
22	EZH2	1416544_at 1444263_at	932	3.290	0.2994	Yes
23	E2F3	1427462_at 1434564_at	989	3.187	0.3063	Yes
24	DPYSL2	1433770_at 1450502_at 1458188_at 1458632_at	1080	3.052	0.3114	Yes
25	SEZ6	1420885_a_at 1427674_a_at 1459972_x_at	1115	3.008	0.3188	Yes
26	POLE2	1427094_at 1431440_at	1207	2.896	0.3233	Yes
27	SLC25A3	1416300_a_at 1440302_at	1257	2.838	0.3296	Yes
28	WEE1	1416773_at 1416774_at	1261	2.836	0.3380	Yes
29	UXT	1418986_a_at	1318	2.775	0.3437	Yes
30	UFD1L	1418087_at 1432367_a_at	1406	2.687	0.3478	Yes
31	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	1610	2.476	0.3459	Yes
32	KPNB1	1416925_at 1434357_a_at 1448526_at 1451967_x_at	1733	2.357	0.3473	Yes
33	PLK4	1419838_s_at 1426580_at 1452115_a_at	1879	2.234	0.3474	Yes
34	PCNA	1417947_at	1885	2.232	0.3539	Yes
35	MDGA1	1432062_at	2012	2.137	0.3545	Yes
36	MCM8	1429557_at	2034	2.124	0.3599	Yes
37	ABCF2	1423863_at	2189	2.012	0.3588	Yes
38	TRIM47	1426784_at	2223	1.994	0.3633	Yes
39	MCM2	1434079_s_at 1448777_at	2322	1.939	0.3646	Yes
40	ING3	1422805_a_at 1422806_x_at 1450760_a_at 1460082_at	2337	1.930	0.3698	Yes
41	E2F1	1417878_at 1431875_a_at 1447840_x_at	2542	1.816	0.3658	Yes
42	NCL	1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at	2565	1.803	0.3702	Yes
43	ORC1L	1422663_at 1443172_at	2636	1.774	0.3724	Yes
44	NPR3	1435184_at 1448024_at 1450286_at	2690	1.753	0.3752	Yes
45	ASCL1	1437086_at 1450164_at	2704	1.749	0.3798	Yes
46	KLF4	1417394_at 1417395_at	3080	1.612	0.3674	No
47	BARHL1	1418811_at 1418812_a_at	3109	1.602	0.3710	No
48	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	3110	1.602	0.3758	No
49	HS6ST3	1421599_at	3241	1.556	0.3745	No
50	AP4M1	1418846_at	3344	1.528	0.3744	No
51	HTF9C	1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at	3356	1.524	0.3784	No
52	OLFML3	1448475_at	3507	1.472	0.3760	No
53	PCSK1	1421396_at	3617	1.435	0.3753	No
54	DNAJC11	1433880_at 1433881_at 1439763_at 1446686_at 1447055_at	3800	1.381	0.3710	No
55	ARHGAP11A	1438434_at	3804	1.379	0.3750	No
56	PAQR4	1423101_at	4516	1.229	0.3461	No
57	STMN1	1415849_s_at	4840	1.165	0.3347	No
58	ZIM2	1432297_at	5072	1.120	0.3275	No
59	SEMA5A	1422167_at 1434776_at 1437422_at 1446772_at 1446865_at 1446910_at 1459109_at	5306	1.081	0.3200	No
60	GCH1	1420499_at 1429692_s_at	5419	1.061	0.3181	No
61	HMGN2	1433507_a_at	5478	1.051	0.3186	No
62	PKMYT1	1418481_at 1438601_at	5843	1.004	0.3049	No
63	HNRPD	1425142_a_at 1446083_at	5909	0.998	0.3049	No
64	JPH1	1421520_at 1438428_at	6218	0.955	0.2936	No
65	INSM1	1421399_at 1455865_at	6227	0.954	0.2961	No
66	EPHB1	1455188_at	6384	0.929	0.2917	No
67	TFRC	1422966_a_at 1422967_a_at 1452661_at AFFX-TransRecMur/X57349_3_at AFFX-TransRecMur/X57349_5_at AFFX-TransRecMur/X57349_M_at	6519	0.911	0.2883	No
68	SFRS12	1427134_at 1427135_at 1427136_s_at 1458056_at	6732	0.880	0.2812	No
69	SNPH	1435210_s_at	8149	0.688	0.2182	No
70	KCNA1	1417416_at 1437230_at 1442413_at 1455785_at	8695	0.622	0.1951	No
71	NDUFA11	1429708_at 1444154_at	9224	0.560	0.1725	No
72	LHX5	1420348_at	9333	0.547	0.1692	No
73	ONECUT1	1421447_at 1450252_at 1456974_at	9665	0.508	0.1555	No
74	TREX2	1449367_at	9751	0.499	0.1531	No
75	ANKHD1	1419867_a_at 1436597_at 1440754_at 1441597_at 1442641_at 1448008_at 1453023_at 1455759_a_at	9779	0.496	0.1534	No
76	CACNA1G	1423365_at	9985	0.472	0.1454	No
77	STK35	1431107_at 1439802_at	10204	0.448	0.1367	No
78	NRP2	1425433_a_at 1426528_at 1435349_at 1452552_at 1456778_at 1459256_at	10291	0.440	0.1341	No
79	SALL1	1450489_at	10417	0.426	0.1296	No
80	CLTA	1421062_s_at 1434540_a_at 1444328_at	10538	0.415	0.1253	No
81	LASP1	1438633_x_at 1438634_x_at 1439264_x_at 1444947_at 1448207_at 1455470_x_at 1456309_x_at 1456469_x_at 1456578_x_at 1460173_at	10691	0.397	0.1196	No
82	ATAD2	1436174_at 1443146_at 1443229_at	11025	0.359	0.1053	No
83	PODN	1435180_at	11171	0.343	0.0997	No
84	SLC6A4	1417150_at	11509	0.303	0.0851	No
85	DNMT1	1422946_a_at 1435122_x_at 1445637_at 1447877_x_at	11510	0.303	0.0861	No
86	FBXO5	1429499_at	11714	0.283	0.0776	No
87	PHF15	1430081_at 1455345_at	11803	0.271	0.0744	No
88	PVRL1	1438111_at 1438421_at 1440131_at 1446488_at 1450819_at	12794	0.165	0.0294	No
89	MAT2A	1423667_at 1433576_at 1438386_x_at 1438630_x_at 1438976_x_at 1439386_x_at 1456702_x_at	13252	0.111	0.0087	No
90	APRIN	1435242_at 1436161_at 1441553_at	13456	0.087	-0.0003	No
91	KCND2	1422834_at 1422835_at 1446065_at 1447764_at 1450773_at 1459288_at	13807	0.039	-0.0163	No
92	BAT3	1433890_a_at	13944	0.022	-0.0225	No
93	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	13992	0.016	-0.0246	No
94	ARHGAP6	1417704_a_at 1451867_x_at 1456333_a_at	14301	-0.029	-0.0386	No
95	PEG3	1417355_at 1417356_at 1433924_at 1447731_at 1447732_x_at	14466	-0.052	-0.0460	No
96	SLC38A1	1415903_at 1454764_s_at	14604	-0.076	-0.0521	No
97	TBX3	1437479_x_at 1439567_at 1444594_at 1445757_at 1448029_at	14670	-0.085	-0.0548	No
98	ADCY8	1418754_at 1443704_at	14700	-0.090	-0.0559	No
99	CTNND2	1422592_at 1438891_at 1443638_at 1445114_at 1447552_s_at 1456116_at	14716	-0.092	-0.0563	No
100	SIX5	1427560_at	14750	-0.096	-0.0575	No
101	RHD	1417049_at	14804	-0.105	-0.0596	No
102	GRIK2	1425790_a_at 1439286_at 1440602_at 1445090_at 1457683_at	14872	-0.118	-0.0623	No
103	TOPBP1	1452241_at 1458480_at	15141	-0.160	-0.0742	No
104	DNAJC5G	1437814_at	15656	-0.250	-0.0970	No
105	PIM1	1423006_at 1435458_at	15787	-0.279	-0.1021	No
106	FMO4	1425799_at 1444852_at	16265	-0.386	-0.1229	No
107	MXD3	1422970_at 1438847_at 1448878_at	16289	-0.394	-0.1228	No
108	ATE1	1420036_at 1420651_at 1420652_at 1435173_at 1446611_at 1449709_s_at	16353	-0.409	-0.1244	No
109	NOL4	1430189_at 1441447_at 1456387_at	16406	-0.421	-0.1256	No
110	EPHB2	1425015_at 1425016_at 1442471_at 1445417_at 1454022_at	16465	-0.437	-0.1269	No
111	CASP8AP2	1449217_at	16798	-0.528	-0.1406	No
112	RFC1	1418342_at 1449050_at 1451920_a_at	16812	-0.533	-0.1396	No
113	TMEM15	1424366_at	16823	-0.536	-0.1384	No
114	DDX17	1437773_x_at 1439037_at 1452155_a_at	16963	-0.583	-0.1431	No
115	KLF5	1430255_at 1451021_a_at 1451739_at	17065	-0.615	-0.1458	No
116	CBX5	1421932_at 1421933_at 1421934_at 1450416_at 1454636_at 1459845_at	17080	-0.619	-0.1446	No
117	WHSC1L1	1442085_at 1447931_at 1455668_at 1457630_at 1457793_a_at 1457794_at 1459907_a_at	17191	-0.658	-0.1477	No
118	CDC25A	1417131_at 1417132_at 1445995_at	17222	-0.670	-0.1471	No
119	SYT11	1429314_at 1429315_at 1429729_at 1436176_at 1449264_at 1455176_a_at	17287	-0.690	-0.1479	No
120	CNOT3	1435965_at 1441465_at	17421	-0.745	-0.1518	No
121	STAG2	1421849_at 1450396_at	17670	-0.846	-0.1607	No
122	ADAMTS2	1435990_at 1455720_at 1457058_at	17774	-0.892	-0.1627	No
123	PELP1	1425042_s_at 1449973_a_at	17902	-0.950	-0.1657	No
124	FOXO3A	1434831_a_at 1434832_at 1439598_at 1444226_at 1450236_at 1458279_at	18027	-0.992	-0.1684	No
125	DDB2	1425706_a_at 1436680_s_at	18146	-1.023	-0.1708	No
126	PRKDC	1451576_at	18211	-1.043	-0.1706	No
127	SSBP3	1425940_a_at 1427917_s_at 1439136_at 1443554_at 1457560_at 1458749_at	18365	-1.105	-0.1743	No
128	CDC45L	1416575_at 1457838_at	18583	-1.205	-0.1806	No
129	IPO7	1442511_at 1454955_at 1458165_at	19024	-1.446	-0.1965	No
130	PHF13	1455175_at	19317	-1.641	-0.2050	No
131	SLC25A14	1417154_at	19358	-1.667	-0.2018	No
132	PHF12	1434922_at 1453579_at	19421	-1.717	-0.1995	No
133	PPP1R8	1424554_at 1435821_s_at	19534	-1.815	-0.1992	No
134	DLST	1423710_at 1430161_at 1431011_at 1437775_at	19585	-1.857	-0.1960	No
135	TBX6	1449868_at	19608	-1.881	-0.1913	No
136	ATRX	1420945_at 1420946_at 1420947_at 1438750_at 1441014_at 1441771_at 1450051_at 1453734_at 1456832_at	19667	-1.929	-0.1882	No
137	ZCCHC8	1423755_at 1441639_at	19867	-2.062	-0.1912	No
138	MAZ	1427099_at	19890	-2.077	-0.1859	No
139	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	20198	-2.362	-0.1930	No
140	RBBP4	1434892_x_at 1442443_at 1454791_a_at 1454875_a_at 1456260_at	20226	-2.396	-0.1870	No
141	DCK	1428838_a_at 1439012_a_at 1449176_a_at	20266	-2.433	-0.1815	No
142	CTDSP1	1452055_at	20652	-2.954	-0.1903	No
143	NUP153	1441689_at 1441733_s_at 1452176_at	20656	-2.957	-0.1816	No
144	CTCF	1418330_at 1449042_at	20704	-3.033	-0.1746	No
145	RAB11B	1423448_at	20856	-3.296	-0.1717	No
146	RBPSUH	1418114_at 1438848_at 1446436_at 1448957_at 1454896_at	20930	-3.443	-0.1647	No
147	E2F7	1437187_at	20960	-3.504	-0.1555	No
148	PAPOLG	1427241_at 1446307_at	21104	-3.809	-0.1507	No
149	H2AFZ	1441370_at	21198	-4.032	-0.1429	No
150	MEIS1	1440431_at 1443260_at 1445773_at 1450992_a_at 1459423_at 1459512_at	21287	-4.272	-0.1341	No
151	AP1S2	1437998_at 1447903_x_at 1452657_at 1456252_x_at 1460036_at	21350	-4.568	-0.1232	No
152	KBTBD7	1428192_at 1439865_at 1452700_s_at	21484	-5.084	-0.1141	No
153	ERBB2IP	1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at	21501	-5.169	-0.0993	No
154	PPP1CC	1440594_at	21604	-5.797	-0.0866	No
155	MCM3	1420029_at 1426653_at	21664	-6.234	-0.0706	No
156	ARID4A	1436191_at 1438464_at 1456420_at	21683	-6.386	-0.0523	No
157	ID3	1416630_at	21719	-6.663	-0.0339	No
158	FLI1	1422024_at 1433512_at 1441584_at	21767	-7.169	-0.0146	No
159	PIAS1	1422581_at 1446448_at 1455486_at 1455611_at	21804	-7.438	0.0061	No