Details for gene set V$E2F

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	V$E2F_03
Enrichment Score (ES)	0.43422478
Normalized Enrichment Score (NES)	1.7403014
Nominal p-value	0.0
FDR q-value	0.061202146
FWER p-Value	0.108

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CDCA7	1428069_at 1445681_at	17	9.326	0.0258	Yes
2	BMP7	1418910_at 1432410_a_at	31	9.059	0.0510	Yes
3	POLA2	1425794_at 1448369_at 1456713_at	39	8.968	0.0763	Yes
4	PRIM1	1418369_at 1444544_at 1449061_a_at	62	8.664	0.0999	Yes
5	FKBP5	1416125_at 1447736_at 1448231_at 1458089_at	71	8.330	0.1233	Yes
6	TCP1	1442317_at 1448122_at	127	6.951	0.1406	Yes
7	MCM6	1416251_at 1438852_x_at 1447756_x_at	213	5.833	0.1533	Yes
8	MCM4	1416214_at 1436708_x_at	225	5.728	0.1691	Yes
9	MYC	1424942_a_at	302	5.162	0.1803	Yes
10	NASP	1416042_s_at 1416043_at 1440328_at 1442728_at	307	5.145	0.1948	Yes
11	HNRPA1	1423531_a_at 1430020_x_at 1436549_a_at 1442758_at 1446038_at 1455305_x_at 1455740_at	358	4.955	0.2066	Yes
12	UNG	1425753_a_at	393	4.771	0.2187	Yes
13	GMNN	1417506_at	412	4.710	0.2313	Yes
14	RANBP1	1422547_at	415	4.703	0.2446	Yes
15	CDC6	1417019_a_at	461	4.496	0.2553	Yes
16	PRPS1	1416052_at	485	4.410	0.2669	Yes
17	LIG1	1416641_at	606	4.015	0.2728	Yes
18	PCSK4	1425824_a_at	642	3.928	0.2824	Yes
19	MRPL18	1448373_at	656	3.892	0.2929	Yes
20	RPA2	1416433_at 1454011_a_at	818	3.519	0.2955	Yes
21	RAD51	1418281_at	836	3.487	0.3046	Yes
22	EZH2	1416544_at 1444263_at	932	3.290	0.3097	Yes
23	EIF4G2	1415863_at 1452758_s_at	983	3.206	0.3165	Yes
24	E2F3	1427462_at 1434564_at	989	3.187	0.3254	Yes
25	POLD1	1448187_at 1456055_x_at	1064	3.085	0.3307	Yes
26	DNAJC9	1426473_at	1079	3.052	0.3388	Yes
27	DPYSL2	1433770_at 1450502_at 1458188_at 1458632_at	1080	3.052	0.3475	Yes
28	EIF2S1	1440272_at 1452662_a_at	1102	3.025	0.3552	Yes
29	SEZ6	1420885_a_at 1427674_a_at 1459972_x_at	1115	3.008	0.3632	Yes
30	LUC7L2	1423251_at 1427087_at 1436165_at 1436766_at 1436767_at 1437761_at 1458423_at	1116	3.007	0.3717	Yes
31	AK2	1448450_at 1448451_at	1145	2.961	0.3789	Yes
32	MELK	1416558_at	1168	2.943	0.3863	Yes
33	RCOR2	1417302_at	1290	2.804	0.3887	Yes
34	TIAM1	1418057_at 1444373_at 1453887_a_at	1292	2.802	0.3966	Yes
35	UXT	1418986_a_at	1318	2.775	0.4034	Yes
36	UFD1L	1418087_at 1432367_a_at	1406	2.687	0.4071	Yes
37	CDKN1A	1421679_a_at 1424638_at	1430	2.662	0.4136	Yes
38	KNTC1	1435575_at	1441	2.656	0.4207	Yes
39	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	1610	2.476	0.4200	Yes
40	LGALS1	1419573_a_at 1455439_a_at	1675	2.410	0.4240	Yes
41	PPRC1	1426381_at	1717	2.370	0.4288	Yes
42	ARF3	1421789_s_at 1423973_a_at 1434787_at 1437331_a_at 1456007_at	1876	2.237	0.4280	Yes
43	PLK4	1419838_s_at 1426580_at 1452115_a_at	1879	2.234	0.4342	Yes
44	MCM2	1434079_s_at 1448777_at	2322	1.939	0.4194	No
45	ING3	1422805_a_at 1422806_x_at 1450760_a_at 1460082_at	2337	1.930	0.4243	No
46	KLHDC3	1415991_a_at 1448164_at 1454747_a_at 1455910_at	2443	1.868	0.4248	No
47	RET	1421359_at	2451	1.866	0.4298	No
48	E2F1	1417878_at 1431875_a_at 1447840_x_at	2542	1.816	0.4308	No
49	ORC1L	1422663_at 1443172_at	2636	1.774	0.4316	No
50	RBL1	1424156_at 1425166_at 1432604_at 1454293_at	2810	1.712	0.4285	No
51	SUV39H1	1427382_a_at 1432227_at 1432236_a_at	3081	1.612	0.4207	No
52	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	3110	1.602	0.4240	No
53	TLE3	1419654_at 1419655_at 1449554_at 1458512_at	3278	1.548	0.4208	No
54	AP4M1	1418846_at	3344	1.528	0.4221	No
55	HTF9C	1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at	3356	1.524	0.4260	No
56	PCSK1	1421396_at	3617	1.435	0.4181	No
57	DNAJC11	1433880_at 1433881_at 1439763_at 1446686_at 1447055_at	3800	1.381	0.4137	No
58	FUS	1451285_at 1451286_s_at 1455831_at 1458801_at	3966	1.342	0.4099	No
59	KCTD15	1435339_at	4070	1.314	0.4089	No
60	DMC1	1420335_at 1449819_at	4079	1.313	0.4123	No
61	SLBP	1430058_at 1460168_at	4430	1.242	0.3998	No
62	PAQR4	1423101_at	4516	1.229	0.3994	No
63	STMN1	1415849_s_at	4840	1.165	0.3878	No
64	ZIM2	1432297_at	5072	1.120	0.3804	No
65	PTMA	1423455_at	5264	1.088	0.3748	No
66	SEMA5A	1422167_at 1434776_at 1437422_at 1446772_at 1446865_at 1446910_at 1459109_at	5306	1.081	0.3759	No
67	GLRA3	1450239_at	5321	1.077	0.3784	No
68	HMGN2	1433507_a_at	5478	1.051	0.3742	No
69	NRIP3	1418104_at 1431597_a_at 1448954_at	5835	1.005	0.3607	No
70	PKMYT1	1418481_at 1438601_at	5843	1.004	0.3633	No
71	ARHGEF17	1419938_s_at 1419939_at 1433682_at 1442357_at 1447441_at	5886	1.000	0.3642	No
72	HNRPD	1425142_a_at 1446083_at	5909	0.998	0.3660	No
73	DCLRE1A	1417904_at 1432097_a_at 1442329_at	6065	0.978	0.3617	No
74	JPH1	1421520_at 1438428_at	6218	0.955	0.3574	No
75	EPHB1	1455188_at	6384	0.929	0.3525	No
76	SLITRK3	1439250_at	6827	0.867	0.3346	No
77	PDGFRA	1421916_at 1421917_at 1438946_at	7628	0.758	0.3000	No
78	RPL28	1416074_a_at	8315	0.667	0.2704	No
79	ANP32A	1421918_at 1434555_at 1450407_a_at	8737	0.617	0.2528	No
80	RNF121	1426503_a_at 1426504_a_at	8944	0.593	0.2451	No
81	PRKCSH	1416339_a_at	9368	0.543	0.2272	No
82	TREX2	1449367_at	9751	0.499	0.2110	No
83	ANP32E	1420592_a_at 1447680_at	9769	0.497	0.2117	No
84	ANKHD1	1419867_a_at 1436597_at 1440754_at 1441597_at 1442641_at 1448008_at 1453023_at 1455759_a_at	9779	0.496	0.2127	No
85	GRIA4	1421351_at 1435722_at 1436772_at 1440891_at 1443285_at 1458230_at 1460097_at	9827	0.490	0.2119	No
86	CACNA1G	1423365_at	9985	0.472	0.2061	No
87	SALL1	1450489_at	10417	0.426	0.1875	No
88	ATAD2	1436174_at 1443146_at 1443229_at	11025	0.359	0.1606	No
89	PODN	1435180_at	11171	0.343	0.1549	No
90	RPS6KA5	1431050_at 1437625_at 1439004_at 1440343_at	11230	0.336	0.1532	No
91	REPS2	1435389_at 1446652_at	11235	0.336	0.1540	No
92	DNMT1	1422946_a_at 1435122_x_at 1445637_at 1447877_x_at	11510	0.303	0.1423	No
93	FBXO5	1429499_at	11714	0.283	0.1337	No
94	PHF15	1430081_at 1455345_at	11803	0.271	0.1305	No
95	KCNA6	1421568_at 1441049_at 1456954_at	11885	0.263	0.1275	No
96	A2BP1	1418314_a_at 1438217_at 1447735_x_at 1455358_at 1456921_at	12009	0.250	0.1226	No
97	RPS20	1456373_x_at 1456436_x_at	12185	0.233	0.1152	No
98	NR3C2	1435991_at 1440306_at 1442533_at	12611	0.187	0.0962	No
99	PPP1R9B	1447247_at 1447486_at	12746	0.170	0.0905	No
100	PVRL1	1438111_at 1438421_at 1440131_at 1446488_at 1450819_at	12794	0.165	0.0888	No
101	MAT2A	1423667_at 1433576_at 1438386_x_at 1438630_x_at 1438976_x_at 1439386_x_at 1456702_x_at	13252	0.111	0.0681	No
102	SLC16A2	1418446_at	13322	0.103	0.0653	No
103	APRIN	1435242_at 1436161_at 1441553_at	13456	0.087	0.0594	No
104	KCND2	1422834_at 1422835_at 1446065_at 1447764_at 1450773_at 1459288_at	13807	0.039	0.0434	No
105	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	13992	0.016	0.0350	No
106	NR6A1	1421515_at 1421516_at 1428825_at 1428826_at 1445872_at	14040	0.010	0.0329	No
107	ARHGAP6	1417704_a_at 1451867_x_at 1456333_a_at	14301	-0.029	0.0210	No
108	VAMP3	1421102_a_at 1433693_x_at 1433916_at 1437708_x_at 1456245_x_at 1457391_at	14447	-0.051	0.0145	No
109	PEG3	1417355_at 1417356_at 1433924_at 1447731_at 1447732_x_at	14466	-0.052	0.0138	No
110	TBX3	1437479_x_at 1439567_at 1444594_at 1445757_at 1448029_at	14670	-0.085	0.0047	No
111	DLL4	1421826_at 1421827_at	14680	-0.086	0.0046	No
112	RHD	1417049_at	14804	-0.105	-0.0008	No
113	EVI1	1423011_at 1438325_at	14826	-0.109	-0.0014	No
114	TOPBP1	1452241_at 1458480_at	15141	-0.160	-0.0154	No
115	CENPB	1426051_a_at 1435944_s_at	15449	-0.211	-0.0289	No
116	FANCG	1420960_at	15516	-0.224	-0.0313	No
117	PIM1	1423006_at 1435458_at	15787	-0.279	-0.0429	No
118	ZIC3	1423424_at 1438737_at	16157	-0.359	-0.0588	No
119	FMO4	1425799_at 1444852_at	16265	-0.386	-0.0627	No
120	MXD3	1422970_at 1438847_at 1448878_at	16289	-0.394	-0.0626	No
121	ATE1	1420036_at 1420651_at 1420652_at 1435173_at 1446611_at 1449709_s_at	16353	-0.409	-0.0643	No
122	EGLN2	1416533_at	16662	-0.486	-0.0771	No
123	DAXX	1419026_at	16736	-0.509	-0.0790	No
124	PLAGL1	1426208_x_at 1438588_at 1450533_a_at	16749	-0.513	-0.0781	No
125	CASP8AP2	1449217_at	16798	-0.528	-0.0788	No
126	RFC1	1418342_at 1449050_at 1451920_a_at	16812	-0.533	-0.0779	No
127	HNRPA0	1428407_at	16866	-0.549	-0.0787	No
128	DDX17	1437773_x_at 1439037_at 1452155_a_at	16963	-0.583	-0.0815	No
129	FBXL20	1442464_at 1445575_at 1452826_s_at 1456378_s_at	17047	-0.609	-0.0836	No
130	KLF5	1430255_at 1451021_a_at 1451739_at	17065	-0.615	-0.0826	No
131	CBX5	1421932_at 1421933_at 1421934_at 1450416_at 1454636_at 1459845_at	17080	-0.619	-0.0815	No
132	NHLRC2	1429145_at 1433929_at 1444863_at 1453048_at 1457312_at	17162	-0.650	-0.0833	No
133	WHSC1L1	1442085_at 1447931_at 1455668_at 1457630_at 1457793_a_at 1457794_at 1459907_a_at	17191	-0.658	-0.0827	No
134	PPM1D	1434142_at 1449092_at 1459069_at	17196	-0.659	-0.0810	No
135	CDC25A	1417131_at 1417132_at 1445995_at	17222	-0.670	-0.0803	No
136	BRMS1L	1452850_s_at 1460443_at	17345	-0.711	-0.0839	No
137	STAG2	1421849_at 1450396_at	17670	-0.846	-0.0963	No
138	ADAMTS2	1435990_at 1455720_at 1457058_at	17774	-0.892	-0.0985	No
139	DDB2	1425706_a_at 1436680_s_at	18146	-1.023	-0.1127	No
140	PRKDC	1451576_at	18211	-1.043	-0.1126	No
141	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	18474	-1.157	-0.1214	No
142	CCNT2	1427088_at 1427089_at 1435445_at 1452297_at 1453399_at 1457439_at	18540	-1.190	-0.1210	No
143	CDC45L	1416575_at 1457838_at	18583	-1.205	-0.1195	No
144	AUTS2	1427293_a_at 1438680_at 1441869_x_at 1442360_at 1443062_at 1443070_at 1443770_x_at 1444069_at 1445307_at 1445469_at 1445538_at 1446849_at 1452379_at 1457139_at 1458592_at 1459338_at	18942	-1.400	-0.1319	No
145	IPO7	1442511_at 1454955_at 1458165_at	19024	-1.446	-0.1315	No
146	STAG1	1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at	19049	-1.462	-0.1285	No
147	EIF5A	1437859_x_at 1451470_s_at	19093	-1.496	-0.1262	No
148	DLST	1423710_at 1430161_at 1431011_at 1437775_at	19585	-1.857	-0.1434	No
149	TOP1	1423474_at 1438495_at 1457573_at 1459672_at	19804	-2.024	-0.1477	No
150	ZCCHC8	1423755_at 1441639_at	19867	-2.062	-0.1447	No
151	MAZ	1427099_at	19890	-2.077	-0.1397	No
152	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	20198	-2.362	-0.1471	No
153	RBBP4	1434892_x_at 1442443_at 1454791_a_at 1454875_a_at 1456260_at	20226	-2.396	-0.1415	No
154	DCK	1428838_a_at 1439012_a_at 1449176_a_at	20266	-2.433	-0.1364	No
155	OSBPL7	1428893_at 1459966_at	20379	-2.574	-0.1342	No
156	ATP6V1D	1416951_a_at 1416952_at 1438993_a_at	20489	-2.711	-0.1315	No
157	CTDSP1	1452055_at	20652	-2.954	-0.1305	No
158	NUP153	1441689_at 1441733_s_at 1452176_at	20656	-2.957	-0.1222	No
159	CTCF	1418330_at 1449042_at	20704	-3.033	-0.1157	No
160	NR4A2	1447863_s_at 1450749_a_at 1450750_a_at 1455034_at	20820	-3.234	-0.1118	No
161	RAB11B	1423448_at	20856	-3.296	-0.1040	No
162	NUTF2	1434367_s_at 1447440_at 1449017_at	20898	-3.385	-0.0962	No
163	E2F7	1437187_at	20960	-3.504	-0.0891	No
164	SF4	1424381_at 1444699_at	20965	-3.516	-0.0792	No
165	SLC25A11	1426586_at	21043	-3.685	-0.0723	No
166	H2AFZ	1441370_at	21198	-4.032	-0.0679	No
167	USP52	1426700_a_at	21235	-4.128	-0.0577	No
168	AXUD1	1434350_at	21612	-5.882	-0.0583	No
169	MCM3	1420029_at 1426653_at	21664	-6.234	-0.0428	No
170	HRBL	1425362_at 1437642_at 1441347_at	21675	-6.316	-0.0253	No
171	ARID4A	1436191_at 1438464_at 1456420_at	21683	-6.386	-0.0074	No
172	ID3	1416630_at	21719	-6.663	0.0100	No