Details for gene set V$E2F

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	V$E2F_02
Enrichment Score (ES)	0.38624126
Normalized Enrichment Score (NES)	1.5447011
Nominal p-value	0.0
FDR q-value	0.11464983
FWER p-Value	0.714

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CDCA7	1428069_at 1445681_at	17	9.326	0.0293	Yes
2	NOLC1	1428869_at 1428870_at 1450087_a_at	33	9.043	0.0578	Yes
3	FKBP5	1416125_at 1447736_at 1448231_at 1458089_at	71	8.330	0.0829	Yes
4	MCM6	1416251_at 1438852_x_at 1447756_x_at	213	5.833	0.0952	Yes
5	MCM4	1416214_at 1436708_x_at	225	5.728	0.1132	Yes
6	MYC	1424942_a_at	302	5.162	0.1264	Yes
7	NASP	1416042_s_at 1416043_at 1440328_at 1442728_at	307	5.145	0.1428	Yes
8	SNRPD1	1416336_s_at	311	5.135	0.1592	Yes
9	ATF5	1425927_a_at	327	5.060	0.1748	Yes
10	HMGA1	1416184_s_at	362	4.933	0.1892	Yes
11	UNG	1425753_a_at	393	4.771	0.2032	Yes
12	GMNN	1417506_at	412	4.710	0.2175	Yes
13	RANBP1	1422547_at	415	4.703	0.2326	Yes
14	CDC6	1417019_a_at	461	4.496	0.2450	Yes
15	PRPS1	1416052_at	485	4.410	0.2582	Yes
16	RQCD1	1450887_at	727	3.714	0.2591	Yes
17	PHF5A	1424170_at	748	3.664	0.2700	Yes
18	EZH2	1416544_at 1444263_at	932	3.290	0.2722	Yes
19	CLSPN	1441984_at 1456280_at	979	3.211	0.2804	Yes
20	E2F3	1427462_at 1434564_at	989	3.187	0.2903	Yes
21	POLD1	1448187_at 1456055_x_at	1064	3.085	0.2969	Yes
22	DNAJC9	1426473_at	1079	3.052	0.3061	Yes
23	AK2	1448450_at 1448451_at	1145	2.961	0.3126	Yes
24	MRPL40	1448849_at	1162	2.949	0.3214	Yes
25	POLE2	1427094_at 1431440_at	1207	2.896	0.3287	Yes
26	POLE4	1423371_at 1423372_at 1432286_at 1444739_at	1592	2.489	0.3191	Yes
27	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	1610	2.476	0.3263	Yes
28	CDC5L	1428092_at 1460429_at	1630	2.448	0.3333	Yes
29	SLC9A5	1420070_a_at 1455760_at	1776	2.324	0.3341	Yes
30	PCNA	1417947_at	1885	2.232	0.3364	Yes
31	EIF4A1	1427058_at 1430980_a_at 1434985_a_at	1943	2.186	0.3408	Yes
32	MCM8	1429557_at	2034	2.124	0.3435	Yes
33	NELL2	1423560_at 1423561_at	2135	2.050	0.3455	Yes
34	POLD3	1426838_at 1426839_at 1443733_x_at 1459647_at	2280	1.965	0.3453	Yes
35	MCM2	1434079_s_at 1448777_at	2322	1.939	0.3496	Yes
36	ING3	1422805_a_at 1422806_x_at 1450760_a_at 1460082_at	2337	1.930	0.3552	Yes
37	RET	1421359_at	2451	1.866	0.3560	Yes
38	E2F1	1417878_at 1431875_a_at 1447840_x_at	2542	1.816	0.3578	Yes
39	NCL	1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at	2565	1.803	0.3626	Yes
40	HIRA	1436241_s_at 1450049_a_at 1450050_at 1459103_at	2681	1.757	0.3630	Yes
41	RBL1	1424156_at 1425166_at 1432604_at 1454293_at	2810	1.712	0.3626	Yes
42	SFRS10	1419543_a_at 1427432_a_at 1441466_at 1446496_at	2886	1.687	0.3646	Yes
43	PB1	1426877_a_at 1426878_at 1427266_at 1442603_at	2913	1.677	0.3688	Yes
44	SUV39H1	1427382_a_at 1432227_at 1432236_a_at	3081	1.612	0.3663	Yes
45	MSH2	1416988_at 1447888_x_at	3123	1.597	0.3696	Yes
46	HS6ST3	1421599_at	3241	1.556	0.3692	Yes
47	TLE3	1419654_at 1419655_at 1449554_at 1458512_at	3278	1.548	0.3726	Yes
48	AP4M1	1418846_at	3344	1.528	0.3745	Yes
49	HTF9C	1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at	3356	1.524	0.3789	Yes
50	ILF3	1422546_at 1436802_at 1460669_at	3451	1.494	0.3794	Yes
51	FANCD2	1430916_at 1438339_at 1439091_at 1442092_at	3590	1.448	0.3778	Yes
52	PCSK1	1421396_at	3617	1.435	0.3812	Yes
53	RRM2	1416120_at 1434437_x_at 1448226_at	3670	1.417	0.3834	Yes
54	RTBDN	1451603_at 1457331_at	3768	1.389	0.3834	Yes
55	ARHGAP11A	1438434_at	3804	1.379	0.3862	Yes
56	GPRC5B	1424613_at 1451411_at	3998	1.333	0.3817	No
57	SYNGR4	1418875_at	4154	1.297	0.3787	No
58	SFRS7	1424033_at 1424883_s_at 1436871_at	4378	1.254	0.3725	No
59	PAQR4	1423101_at	4516	1.229	0.3702	No
60	STMN1	1415849_s_at	4840	1.165	0.3591	No
61	MAPT	1417885_at 1424718_at 1424719_a_at 1445634_at 1455028_at	4966	1.139	0.3571	No
62	GSPT1	1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at	4997	1.133	0.3593	No
63	HNRPA2B1	1420365_a_at 1433829_a_at 1433830_at 1434047_x_at	5005	1.131	0.3627	No
64	ZIM2	1432297_at	5072	1.120	0.3632	No
65	PTMA	1423455_at	5264	1.088	0.3580	No
66	ZBTB4	1429722_at 1460488_at	5299	1.083	0.3599	No
67	MAP3K7	1419988_at 1425795_a_at 1426627_at 1449693_at 1455441_at 1458787_at	5318	1.078	0.3626	No
68	GLRA3	1450239_at	5321	1.077	0.3659	No
69	PKMYT1	1418481_at 1438601_at	5843	1.004	0.3453	No
70	HNRPD	1425142_a_at 1446083_at	5909	0.998	0.3455	No
71	EPHB1	1455188_at	6384	0.929	0.3267	No
72	EFNA5	1421796_a_at 1436866_at 1440052_at 1446383_at 1451930_at	6416	0.925	0.3283	No
73	AP1S1	1416087_at	6440	0.921	0.3302	No
74	GATA1	1449232_at	7007	0.838	0.3069	No
75	KCNS2	1421342_at 1441211_at 1457325_at	7508	0.775	0.2864	No
76	POLR2A	1422311_a_at 1426242_at 1458710_at	7677	0.752	0.2811	No
77	SEMA6A	1421414_a_at 1425903_at 1436458_at	8262	0.675	0.2565	No
78	CORT	1449820_at	8399	0.657	0.2524	No
79	GABRB3	1421189_at 1421190_at 1435021_at	8493	0.646	0.2502	No
80	CBX3	1432628_at 1454305_at	8748	0.616	0.2405	No
81	PAX6	1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at	8873	0.601	0.2368	No
82	GRIA4	1421351_at 1435722_at 1436772_at 1440891_at 1443285_at 1458230_at 1460097_at	9827	0.490	0.1946	No
83	STK35	1431107_at 1439802_at	10204	0.448	0.1787	No
84	POU4F1	1429667_at 1429668_at	10594	0.409	0.1622	No
85	FHOD1	1435557_at	10856	0.377	0.1514	No
86	PRPS2	1420637_at 1420638_at 1443418_at 1454843_at	10984	0.363	0.1468	No
87	ATAD2	1436174_at 1443146_at 1443229_at	11025	0.359	0.1461	No
88	PODN	1435180_at	11171	0.343	0.1405	No
89	RPS6KA5	1431050_at 1437625_at 1439004_at 1440343_at	11230	0.336	0.1390	No
90	SOAT1	1417695_a_at 1417696_at 1417697_at 1426818_at 1448068_at	11377	0.319	0.1333	No
91	HOXC10	1439798_at	11465	0.307	0.1303	No
92	CSPG2	1421694_a_at 1427256_at 1427257_at 1433043_at 1433044_at 1447586_at 1447887_x_at 1459767_x_at	11475	0.306	0.1308	No
93	NRK	1436399_s_at 1450078_at 1450079_at	11489	0.304	0.1312	No
94	DNMT1	1422946_a_at 1435122_x_at 1445637_at 1447877_x_at	11510	0.303	0.1313	No
95	FBXO5	1429499_at	11714	0.283	0.1229	No
96	PHF15	1430081_at 1455345_at	11803	0.271	0.1197	No
97	PRPF4B	1425497_a_at 1425498_at 1436427_at 1451732_at 1451909_a_at 1455696_a_at	11806	0.271	0.1205	No
98	KCNA6	1421568_at 1441049_at 1456954_at	11885	0.263	0.1178	No
99	RPS20	1456373_x_at 1456436_x_at	12185	0.233	0.1048	No
100	FANCC	1442265_at 1447632_at 1450861_at	12263	0.226	0.1020	No
101	RAVER1	1427110_at 1427111_s_at 1444966_at	13088	0.130	0.0645	No
102	YBX2	1420762_a_at	13658	0.059	0.0386	No
103	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	13992	0.016	0.0234	No
104	MYH10	1441057_at 1452740_at	14004	0.014	0.0229	No
105	NR6A1	1421515_at 1421516_at 1428825_at 1428826_at 1445872_at	14040	0.010	0.0213	No
106	RASAL2	1436910_at 1444671_at	14161	-0.007	0.0158	No
107	ARHGAP6	1417704_a_at 1451867_x_at 1456333_a_at	14301	-0.029	0.0096	No
108	PEG3	1417355_at 1417356_at 1433924_at 1447731_at 1447732_x_at	14466	-0.052	0.0022	No
109	TOPBP1	1452241_at 1458480_at	15141	-0.160	-0.0282	No
110	TYRO3	1425248_a_at 1425249_a_at	15300	-0.185	-0.0349	No
111	FANCG	1420960_at	15516	-0.224	-0.0441	No
112	DNAJC5G	1437814_at	15656	-0.250	-0.0496	No
113	PIM1	1423006_at 1435458_at	15787	-0.279	-0.0547	No
114	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	16053	-0.337	-0.0658	No
115	FMO4	1425799_at 1444852_at	16265	-0.386	-0.0742	No
116	MXD3	1422970_at 1438847_at 1448878_at	16289	-0.394	-0.0740	No
117	MAPK6	1419168_at 1419169_at 1429963_at 1459146_at	16676	-0.490	-0.0902	No
118	PLAGL1	1426208_x_at 1438588_at 1450533_a_at	16749	-0.513	-0.0918	No
119	CASP8AP2	1449217_at	16798	-0.528	-0.0923	No
120	PPIG	1434475_at 1435341_at 1436505_at	16955	-0.581	-0.0976	No
121	PPM1D	1434142_at 1449092_at 1459069_at	17196	-0.659	-0.1065	No
122	CDC25A	1417131_at 1417132_at 1445995_at	17222	-0.670	-0.1055	No
123	MSH5	1430771_a_at 1449537_at	17344	-0.711	-0.1088	No
124	BRMS1L	1452850_s_at 1460443_at	17345	-0.711	-0.1065	No
125	EED	1448653_at	17407	-0.739	-0.1069	No
126	SUMO1	1438289_a_at 1444557_at 1451005_at 1456349_x_at	17594	-0.817	-0.1128	No
127	HCN3	1451023_at	17635	-0.833	-0.1119	No
128	STAG2	1421849_at 1450396_at	17670	-0.846	-0.1108	No
129	ACBD6	1452601_a_at 1453199_at	17693	-0.854	-0.1090	No
130	ADAMTS2	1435990_at 1455720_at 1457058_at	17774	-0.892	-0.1098	No
131	PRKDC	1451576_at	18211	-1.043	-0.1265	No
132	ACO2	1436934_s_at 1442102_at 1451002_at	18268	-1.064	-0.1256	No
133	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	18474	-1.157	-0.1313	No
134	TMPO	1421237_at 1426020_at 1426349_s_at 1428976_at 1452036_a_at	18495	-1.167	-0.1285	No
135	IL4I1	1419192_at	18576	-1.204	-0.1283	No
136	IPO7	1442511_at 1454955_at 1458165_at	19024	-1.446	-0.1441	No
137	STAG1	1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at	19049	-1.462	-0.1405	No
138	USP37	1434242_at 1438212_at	19174	-1.552	-0.1412	No
139	CCNT1	1419313_at 1456477_at	19227	-1.582	-0.1385	No
140	HNRPUL1	1451984_at	19393	-1.699	-0.1406	No
141	SP3	1431804_a_at 1459360_at	19471	-1.754	-0.1385	No
142	PHC1	1423212_at	19605	-1.878	-0.1385	No
143	TBX6	1449868_at	19608	-1.881	-0.1326	No
144	ZCCHC8	1423755_at 1441639_at	19867	-2.062	-0.1378	No
145	MAZ	1427099_at	19890	-2.077	-0.1321	No
146	ALDH6A1	1448104_at	19964	-2.141	-0.1285	No
147	SLCO3A1	1418030_at 1434537_at 1448918_at	20008	-2.185	-0.1234	No
148	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	20198	-2.362	-0.1245	No
149	NUP62	1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at	20265	-2.430	-0.1197	No
150	DCK	1428838_a_at 1439012_a_at 1449176_a_at	20266	-2.433	-0.1119	No
151	HNRPR	1427129_a_at 1438807_at 1452030_a_at	20509	-2.740	-0.1141	No
152	BRPF1	1460402_at	20791	-3.170	-0.1168	No
153	E2F7	1437187_at	20960	-3.504	-0.1132	No
154	UGCGL1	1432318_at 1448009_at 1455839_at	21031	-3.660	-0.1047	No
155	H2AFZ	1441370_at	21198	-4.032	-0.0993	No
156	TRIM39	1418851_at	21234	-4.127	-0.0876	No
157	USP52	1426700_a_at	21235	-4.128	-0.0743	No
158	KBTBD7	1428192_at 1439865_at 1452700_s_at	21484	-5.084	-0.0693	No
159	MCM3	1420029_at 1426653_at	21664	-6.234	-0.0574	No
160	ARID4A	1436191_at 1438464_at 1456420_at	21683	-6.386	-0.0376	No
161	ID3	1416630_at	21719	-6.663	-0.0177	No
162	H2AFV	1428029_a_at 1436596_at	21933	-8.580	0.0001	No