Details for gene set V$E2F1_Q6

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	V$E2F1_Q6_01
Enrichment Score (ES)	0.4034078
Normalized Enrichment Score (NES)	1.6146505
Nominal p-value	0.0
FDR q-value	0.062324673
FWER p-Value	0.442

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CDCA7	1428069_at 1445681_at	17	9.326	0.0273	Yes
2	NOLC1	1428869_at 1428870_at 1450087_a_at	33	9.043	0.0538	Yes
3	POLA2	1425794_at 1448369_at 1456713_at	39	8.968	0.0806	Yes
4	FKBP5	1416125_at 1447736_at 1448231_at 1458089_at	71	8.330	0.1042	Yes
5	AMD1	1448484_at	154	6.532	0.1201	Yes
6	MCM6	1416251_at 1438852_x_at 1447756_x_at	213	5.833	0.1350	Yes
7	MCM4	1416214_at 1436708_x_at	225	5.728	0.1518	Yes
8	MYC	1424942_a_at	302	5.162	0.1638	Yes
9	NASP	1416042_s_at 1416043_at 1440328_at 1442728_at	307	5.145	0.1791	Yes
10	HNRPA1	1423531_a_at 1430020_x_at 1436549_a_at 1442758_at 1446038_at 1455305_x_at 1455740_at	358	4.955	0.1917	Yes
11	UNG	1425753_a_at	393	4.771	0.2045	Yes
12	GMNN	1417506_at	412	4.710	0.2179	Yes
13	RANBP1	1422547_at	415	4.703	0.2320	Yes
14	ESPL1	1433862_at	416	4.703	0.2461	Yes
15	PRPS1	1416052_at	485	4.410	0.2563	Yes
16	RQCD1	1450887_at	727	3.714	0.2564	Yes
17	PHF5A	1424170_at	748	3.664	0.2665	Yes
18	SLC25A1	1428190_at	778	3.607	0.2760	Yes
19	RAD51	1418281_at	836	3.487	0.2839	Yes
20	EZH2	1416544_at 1444263_at	932	3.290	0.2894	Yes
21	CLSPN	1441984_at 1456280_at	979	3.211	0.2970	Yes
22	E2F3	1427462_at 1434564_at	989	3.187	0.3062	Yes
23	DNAJC9	1426473_at	1079	3.052	0.3113	Yes
24	AK2	1448450_at 1448451_at	1145	2.961	0.3172	Yes
25	MRPL40	1448849_at	1162	2.949	0.3253	Yes
26	POLE2	1427094_at 1431440_at	1207	2.896	0.3320	Yes
27	RPL18	1437005_a_at 1450372_a_at	1236	2.862	0.3394	Yes
28	WEE1	1416773_at 1416774_at	1261	2.836	0.3468	Yes
29	UXT	1418986_a_at	1318	2.775	0.3526	Yes
30	UFD1L	1418087_at 1432367_a_at	1406	2.687	0.3567	Yes
31	ATP5G2	1415980_at 1456128_at	1410	2.683	0.3646	Yes
32	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	1610	2.476	0.3629	Yes
33	CDC5L	1428092_at 1460429_at	1630	2.448	0.3694	Yes
34	FAF1	1418242_at 1434370_s_at	1691	2.394	0.3739	Yes
35	PPRC1	1426381_at	1717	2.370	0.3799	Yes
36	SLC9A5	1420070_a_at 1455760_at	1776	2.324	0.3842	Yes
37	PCNA	1417947_at	1885	2.232	0.3859	Yes
38	MCM8	1429557_at	2034	2.124	0.3855	Yes
39	RPS19	1449243_a_at 1460442_at	2085	2.085	0.3895	Yes
40	POLD3	1426838_at 1426839_at 1443733_x_at 1459647_at	2280	1.965	0.3865	Yes
41	MCM2	1434079_s_at 1448777_at	2322	1.939	0.3905	Yes
42	E2F1	1417878_at 1431875_a_at 1447840_x_at	2542	1.816	0.3859	Yes
43	NCL	1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at	2565	1.803	0.3903	Yes
44	ORC1L	1422663_at 1443172_at	2636	1.774	0.3924	Yes
45	HIRA	1436241_s_at 1450049_a_at 1450050_at 1459103_at	2681	1.757	0.3957	Yes
46	RBL1	1424156_at 1425166_at 1432604_at 1454293_at	2810	1.712	0.3950	Yes
47	SUV39H1	1427382_a_at 1432227_at 1432236_a_at	3081	1.612	0.3874	Yes
48	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	3110	1.602	0.3909	Yes
49	MSH2	1416988_at 1447888_x_at	3123	1.597	0.3952	Yes
50	AP4M1	1418846_at	3344	1.528	0.3897	Yes
51	HTF9C	1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at	3356	1.524	0.3938	Yes
52	ILF3	1422546_at 1436802_at 1460669_at	3451	1.494	0.3940	Yes
53	PCSK1	1421396_at	3617	1.435	0.3907	Yes
54	FZD1	1422985_at 1437284_at	3648	1.423	0.3936	Yes
55	LRP1	1442849_at 1448655_at	3655	1.420	0.3976	Yes
56	ERF	1422114_at 1435561_at	3738	1.396	0.3980	Yes
57	DNAJC11	1433880_at 1433881_at 1439763_at 1446686_at 1447055_at	3800	1.381	0.3994	Yes
58	ARHGAP11A	1438434_at	3804	1.379	0.4034	Yes
59	GPRC5B	1424613_at 1451411_at	3998	1.333	0.3986	No
60	SYNGR4	1418875_at	4154	1.297	0.3953	No
61	PAQR4	1423101_at	4516	1.229	0.3824	No
62	USP2	1417168_a_at 1417169_at	4736	1.184	0.3760	No
63	STMN1	1415849_s_at	4840	1.165	0.3747	No
64	GSPT1	1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at	4997	1.133	0.3710	No
65	PTMA	1423455_at	5264	1.088	0.3620	No
66	HMGN2	1433507_a_at	5478	1.051	0.3554	No
67	SYT6	1420188_at 1426106_a_at 1449766_at 1449767_x_at	5634	1.032	0.3514	No
68	ACTN3	1418677_at	5713	1.021	0.3509	No
69	PKMYT1	1418481_at 1438601_at	5843	1.004	0.3480	No
70	HNRPD	1425142_a_at 1446083_at	5909	0.998	0.3480	No
71	JPH1	1421520_at 1438428_at	6218	0.955	0.3367	No
72	INSM1	1421399_at 1455865_at	6227	0.954	0.3392	No
73	EFNA5	1421796_a_at 1436866_at 1440052_at 1446383_at 1451930_at	6416	0.925	0.3334	No
74	AP1S1	1416087_at	6440	0.921	0.3351	No
75	ENPP1	1419276_at 1459546_s_at	6495	0.914	0.3354	No
76	SFRS12	1427134_at 1427135_at 1427136_s_at 1458056_at	6732	0.880	0.3272	No
77	GATA1	1449232_at	7007	0.838	0.3171	No
78	DHH	1422127_at 1434959_at	7322	0.796	0.3051	No
79	KCNS2	1421342_at 1441211_at 1457325_at	7508	0.775	0.2989	No
80	GADD45B	1420197_at 1449773_s_at 1450971_at	7784	0.739	0.2885	No
81	PAX6	1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at	8873	0.601	0.2403	No
82	ANKHD1	1419867_a_at 1436597_at 1440754_at 1441597_at 1442641_at 1448008_at 1453023_at 1455759_a_at	9779	0.496	0.2002	No
83	BMP2	1423635_at	9848	0.487	0.1986	No
84	STK35	1431107_at 1439802_at	10204	0.448	0.1836	No
85	FHOD1	1435557_at	10856	0.377	0.1548	No
86	ATAD2	1436174_at 1443146_at 1443229_at	11025	0.359	0.1482	No
87	IRX3	1418517_at	11105	0.350	0.1456	No
88	HR	1422110_at 1435950_at	11152	0.346	0.1446	No
89	PODN	1435180_at	11171	0.343	0.1448	No
90	IGSF4D	1435145_at 1435146_s_at 1435147_x_at 1436743_at 1440412_at 1444664_at 1459761_x_at	11197	0.340	0.1446	No
91	REPS2	1435389_at 1446652_at	11235	0.336	0.1439	No
92	HOXC10	1439798_at	11465	0.307	0.1344	No
93	DNMT1	1422946_a_at 1435122_x_at 1445637_at 1447877_x_at	11510	0.303	0.1332	No
94	FBXO5	1429499_at	11714	0.283	0.1248	No
95	TNF	1419607_at	11771	0.274	0.1230	No
96	PHF15	1430081_at 1455345_at	11803	0.271	0.1224	No
97	FANCC	1442265_at 1447632_at 1450861_at	12263	0.226	0.1020	No
98	RAVER1	1427110_at 1427111_s_at 1444966_at	13088	0.130	0.0645	No
99	GNG4	1417943_at 1417944_at 1447669_s_at	13231	0.115	0.0584	No
100	YBX2	1420762_a_at	13658	0.059	0.0390	No
101	MYH10	1441057_at 1452740_at	14004	0.014	0.0232	No
102	ARHGAP6	1417704_a_at 1451867_x_at 1456333_a_at	14301	-0.029	0.0096	No
103	CTNND2	1422592_at 1438891_at 1443638_at 1445114_at 1447552_s_at 1456116_at	14716	-0.092	-0.0091	No
104	NPAT	1456485_at 1459185_at	14718	-0.092	-0.0089	No
105	ATM	1421205_at 1428830_at	15042	-0.145	-0.0233	No
106	TOPBP1	1452241_at 1458480_at	15141	-0.160	-0.0273	No
107	TYRO3	1425248_a_at 1425249_a_at	15300	-0.185	-0.0340	No
108	HMGA2	1422851_at 1443394_at 1446196_at 1450780_s_at 1450781_at 1458241_at	15327	-0.192	-0.0346	No
109	SP1	1418180_at 1448994_at 1454852_at	15376	-0.199	-0.0362	No
110	FANCG	1420960_at	15516	-0.224	-0.0419	No
111	DNAJC5G	1437814_at	15656	-0.250	-0.0476	No
112	RB1CC1	1418968_at 1431605_at 1449292_at	15773	-0.276	-0.0521	No
113	MGAT2	1426350_at 1452037_at	16021	-0.329	-0.0624	No
114	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	16053	-0.337	-0.0628	No
115	NUMA1	1423974_at 1423975_s_at 1441090_at 1444576_at 1444577_x_at	16121	-0.352	-0.0648	No
116	MXD3	1422970_at 1438847_at 1448878_at	16289	-0.394	-0.0713	No
117	ATE1	1420036_at 1420651_at 1420652_at 1435173_at 1446611_at 1449709_s_at	16353	-0.409	-0.0730	No
118	CASP8AP2	1449217_at	16798	-0.528	-0.0918	No
119	TMEM15	1424366_at	16823	-0.536	-0.0913	No
120	DDX17	1437773_x_at 1439037_at 1452155_a_at	16963	-0.583	-0.0959	No
121	KLF5	1430255_at 1451021_a_at 1451739_at	17065	-0.615	-0.0987	No
122	CBX5	1421932_at 1421933_at 1421934_at 1450416_at 1454636_at 1459845_at	17080	-0.619	-0.0975	No
123	TCF8	1418926_at 1420243_at 1443005_at 1443203_at 1446127_at 1456686_at	17138	-0.641	-0.0982	No
124	WHSC1L1	1442085_at 1447931_at 1455668_at 1457630_at 1457793_a_at 1457794_at 1459907_a_at	17191	-0.658	-0.0986	No
125	PPM1D	1434142_at 1449092_at 1459069_at	17196	-0.659	-0.0968	No
126	CDC25A	1417131_at 1417132_at 1445995_at	17222	-0.670	-0.0959	No
127	SMARCA1	1460292_a_at	17225	-0.670	-0.0940	No
128	BRMS1L	1452850_s_at 1460443_at	17345	-0.711	-0.0973	No
129	EED	1448653_at	17407	-0.739	-0.0979	No
130	CNOT3	1435965_at 1441465_at	17421	-0.745	-0.0963	No
131	PCDH10	1421311_at 1425563_s_at 1430667_at 1438134_at 1442565_at 1444301_at	17425	-0.746	-0.0941	No
132	POU2F1	1419716_a_at 1427695_a_at 1427835_at	17578	-0.808	-0.0987	No
133	SUMO1	1438289_a_at 1444557_at 1451005_at 1456349_x_at	17594	-0.817	-0.0969	No
134	HCN3	1451023_at	17635	-0.833	-0.0963	No
135	STAG2	1421849_at 1450396_at	17670	-0.846	-0.0953	No
136	ACBD6	1452601_a_at 1453199_at	17693	-0.854	-0.0937	No
137	ADAMTS2	1435990_at 1455720_at 1457058_at	17774	-0.892	-0.0947	No
138	CHD4	1436343_at 1438476_a_at 1451295_a_at	17819	-0.912	-0.0940	No
139	DDB2	1425706_a_at 1436680_s_at	18146	-1.023	-0.1059	No
140	PRKDC	1451576_at	18211	-1.043	-0.1057	No
141	ACO2	1436934_s_at 1442102_at 1451002_at	18268	-1.064	-0.1050	No
142	SPHK2	1417431_a_at 1426230_at	18428	-1.132	-0.1089	No
143	SIN3A	1419101_at 1419102_at 1419900_at 1449343_s_at	18444	-1.142	-0.1062	No
144	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	18474	-1.157	-0.1040	No
145	TMPO	1421237_at 1426020_at 1426349_s_at 1428976_at 1452036_a_at	18495	-1.167	-0.1015	No
146	CDC45L	1416575_at 1457838_at	18583	-1.205	-0.1018	No
147	CASP2	1448165_at	19011	-1.437	-0.1171	No
148	IPO7	1442511_at 1454955_at 1458165_at	19024	-1.446	-0.1133	No
149	STAG1	1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at	19049	-1.462	-0.1100	No
150	USP37	1434242_at 1438212_at	19174	-1.552	-0.1110	No
151	CCNT1	1419313_at 1456477_at	19227	-1.582	-0.1087	No
152	PHF13	1455175_at	19317	-1.641	-0.1078	No
153	HNRPUL1	1451984_at	19393	-1.699	-0.1061	No
154	PPP1R8	1424554_at 1435821_s_at	19534	-1.815	-0.1071	No
155	TBX6	1449868_at	19608	-1.881	-0.1048	No
156	MAZ	1427099_at	19890	-2.077	-0.1115	No
157	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	20198	-2.362	-0.1185	No
158	DLEU2	1427410_at 1427411_s_at 1456145_at	20328	-2.508	-0.1168	No
159	HNRPR	1427129_a_at 1438807_at 1452030_a_at	20509	-2.740	-0.1169	No
160	CTCF	1418330_at 1449042_at	20704	-3.033	-0.1166	No
161	NCOA6	1423374_at	20816	-3.226	-0.1120	No
162	RAB11B	1423448_at	20856	-3.296	-0.1039	No
163	TRIM39	1418851_at	21234	-4.127	-0.1088	No
164	USP52	1426700_a_at	21235	-4.128	-0.0964	No
165	PIK3CD	1422991_at 1422992_s_at 1443798_at 1453281_at 1458321_at	21476	-5.037	-0.0922	No
166	KBTBD7	1428192_at 1439865_at 1452700_s_at	21484	-5.084	-0.0772	No
167	ERBB2IP	1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at	21501	-5.169	-0.0624	No
168	MCM3	1420029_at 1426653_at	21664	-6.234	-0.0511	No
169	ID3	1416630_at	21719	-6.663	-0.0335	No
170	FLI1	1422024_at 1433512_at 1441584_at	21767	-7.169	-0.0141	No
171	MTSS1	1424826_s_at 1434036_at 1440847_at 1443729_at 1446284_at 1451496_at	21776	-7.245	0.0074	No