Details for gene set V$E2F1

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	V$E2F1_Q6
Enrichment Score (ES)	0.37503624
Normalized Enrichment Score (NES)	1.5087419
Nominal p-value	0.0019455253
FDR q-value	0.072391324
FWER p-Value	0.855

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CDCA7	1428069_at 1445681_at	17	9.326	0.0281	Yes
2	NOLC1	1428869_at 1428870_at 1450087_a_at	33	9.043	0.0554	Yes
3	FKBP5	1416125_at 1447736_at 1448231_at 1458089_at	71	8.330	0.0795	Yes
4	MCM6	1416251_at 1438852_x_at 1447756_x_at	213	5.833	0.0911	Yes
5	MCM4	1416214_at 1436708_x_at	225	5.728	0.1084	Yes
6	MYC	1424942_a_at	302	5.162	0.1209	Yes
7	NASP	1416042_s_at 1416043_at 1440328_at 1442728_at	307	5.145	0.1366	Yes
8	SNRPD1	1416336_s_at	311	5.135	0.1524	Yes
9	ATF5	1425927_a_at	327	5.060	0.1674	Yes
10	HMGA1	1416184_s_at	362	4.933	0.1811	Yes
11	UNG	1425753_a_at	393	4.771	0.1945	Yes
12	GMNN	1417506_at	412	4.710	0.2083	Yes
13	RANBP1	1422547_at	415	4.703	0.2228	Yes
14	CDC6	1417019_a_at	461	4.496	0.2346	Yes
15	PRPS1	1416052_at	485	4.410	0.2472	Yes
16	RQCD1	1450887_at	727	3.714	0.2477	Yes
17	PHF5A	1424170_at	748	3.664	0.2581	Yes
18	EZH2	1416544_at 1444263_at	932	3.290	0.2599	Yes
19	CLSPN	1441984_at 1456280_at	979	3.211	0.2677	Yes
20	E2F3	1427462_at 1434564_at	989	3.187	0.2772	Yes
21	POLD1	1448187_at 1456055_x_at	1064	3.085	0.2833	Yes
22	DNAJC9	1426473_at	1079	3.052	0.2921	Yes
23	AK2	1448450_at 1448451_at	1145	2.961	0.2983	Yes
24	MRPL40	1448849_at	1162	2.949	0.3067	Yes
25	POLE2	1427094_at 1431440_at	1207	2.896	0.3137	Yes
26	CDT1	1424143_a_at 1424144_at 1455791_at	1225	2.881	0.3218	Yes
27	SLC25A3	1416300_a_at 1440302_at	1257	2.838	0.3292	Yes
28	POLE4	1423371_at 1423372_at 1432286_at 1444739_at	1592	2.489	0.3216	Yes
29	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	1610	2.476	0.3285	Yes
30	CDC5L	1428092_at 1460429_at	1630	2.448	0.3352	Yes
31	KPNB1	1416925_at 1434357_a_at 1448526_at 1451967_x_at	1733	2.357	0.3378	Yes
32	SLC9A5	1420070_a_at 1455760_at	1776	2.324	0.3431	Yes
33	PCNA	1417947_at	1885	2.232	0.3450	Yes
34	MCM8	1429557_at	2034	2.124	0.3448	Yes
35	NELL2	1423560_at 1423561_at	2135	2.050	0.3465	Yes
36	POLD3	1426838_at 1426839_at 1443733_x_at 1459647_at	2280	1.965	0.3460	Yes
37	MCM2	1434079_s_at 1448777_at	2322	1.939	0.3501	Yes
38	ING3	1422805_a_at 1422806_x_at 1450760_a_at 1460082_at	2337	1.930	0.3555	Yes
39	E2F1	1417878_at 1431875_a_at 1447840_x_at	2542	1.816	0.3517	Yes
40	NCL	1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at	2565	1.803	0.3563	Yes
41	ORC1L	1422663_at 1443172_at	2636	1.774	0.3586	Yes
42	HIRA	1436241_s_at 1450049_a_at 1450050_at 1459103_at	2681	1.757	0.3620	Yes
43	RBL1	1424156_at 1425166_at 1432604_at 1454293_at	2810	1.712	0.3614	Yes
44	SFRS10	1419543_a_at 1427432_a_at 1441466_at 1446496_at	2886	1.687	0.3632	Yes
45	PB1	1426877_a_at 1426878_at 1427266_at 1442603_at	2913	1.677	0.3672	Yes
46	SUV39H1	1427382_a_at 1432227_at 1432236_a_at	3081	1.612	0.3645	Yes
47	MSH2	1416988_at 1447888_x_at	3123	1.597	0.3676	Yes
48	HS6ST3	1421599_at	3241	1.556	0.3671	Yes
49	AP4M1	1418846_at	3344	1.528	0.3671	Yes
50	HTF9C	1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at	3356	1.524	0.3713	Yes
51	ILF3	1422546_at 1436802_at 1460669_at	3451	1.494	0.3716	Yes
52	FANCD2	1430916_at 1438339_at 1439091_at 1442092_at	3590	1.448	0.3698	Yes
53	PCSK1	1421396_at	3617	1.435	0.3730	Yes
54	RRM2	1416120_at 1434437_x_at 1448226_at	3670	1.417	0.3750	Yes
55	ARHGAP11A	1438434_at	3804	1.379	0.3732	No
56	GPRC5B	1424613_at 1451411_at	3998	1.333	0.3685	No
57	SYNGR4	1418875_at	4154	1.297	0.3654	No
58	SFRS7	1424033_at 1424883_s_at 1436871_at	4378	1.254	0.3590	No
59	PAQR4	1423101_at	4516	1.229	0.3565	No
60	STMN1	1415849_s_at	4840	1.165	0.3453	No
61	GSPT1	1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at	4997	1.133	0.3416	No
62	HNRPA2B1	1420365_a_at 1433829_a_at 1433830_at 1434047_x_at	5005	1.131	0.3448	No
63	ZBTB4	1429722_at 1460488_at	5299	1.083	0.3347	No
64	MAP3K7	1419988_at 1425795_a_at 1426627_at 1449693_at 1455441_at 1458787_at	5318	1.078	0.3372	No
65	PKMYT1	1418481_at 1438601_at	5843	1.004	0.3163	No
66	HNRPD	1425142_a_at 1446083_at	5909	0.998	0.3164	No
67	EPHB1	1455188_at	6384	0.929	0.2975	No
68	EFNA5	1421796_a_at 1436866_at 1440052_at 1446383_at 1451930_at	6416	0.925	0.2989	No
69	AP1S1	1416087_at	6440	0.921	0.3007	No
70	SFRS12	1427134_at 1427135_at 1427136_s_at 1458056_at	6732	0.880	0.2901	No
71	GATA1	1449232_at	7007	0.838	0.2801	No
72	KCNS2	1421342_at 1441211_at 1457325_at	7508	0.775	0.2595	No
73	POLR2A	1422311_a_at 1426242_at 1458710_at	7677	0.752	0.2542	No
74	SEMA6A	1421414_a_at 1425903_at 1436458_at	8262	0.675	0.2294	No
75	CORT	1449820_at	8399	0.657	0.2252	No
76	GABRB3	1421189_at 1421190_at 1435021_at	8493	0.646	0.2230	No
77	CBX3	1432628_at 1454305_at	8748	0.616	0.2132	No
78	PAX6	1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at	8873	0.601	0.2094	No
79	GRIA4	1421351_at 1435722_at 1436772_at 1440891_at 1443285_at 1458230_at 1460097_at	9827	0.490	0.1671	No
80	CACNA1G	1423365_at	9985	0.472	0.1614	No
81	STK35	1431107_at 1439802_at	10204	0.448	0.1527	No
82	SALL1	1450489_at	10417	0.426	0.1443	No
83	FHOD1	1435557_at	10856	0.377	0.1254	No
84	PRPS2	1420637_at 1420638_at 1443418_at 1454843_at	10984	0.363	0.1207	No
85	ATAD2	1436174_at 1443146_at 1443229_at	11025	0.359	0.1199	No
86	PODN	1435180_at	11171	0.343	0.1143	No
87	RPS6KA5	1431050_at 1437625_at 1439004_at 1440343_at	11230	0.336	0.1127	No
88	SOAT1	1417695_a_at 1417696_at 1417697_at 1426818_at 1448068_at	11377	0.319	0.1070	No
89	HOXC10	1439798_at	11465	0.307	0.1040	No
90	CSPG2	1421694_a_at 1427256_at 1427257_at 1433043_at 1433044_at 1447586_at 1447887_x_at 1459767_x_at	11475	0.306	0.1045	No
91	NRK	1436399_s_at 1450078_at 1450079_at	11489	0.304	0.1048	No
92	DNMT1	1422946_a_at 1435122_x_at 1445637_at 1447877_x_at	11510	0.303	0.1049	No
93	FBXO5	1429499_at	11714	0.283	0.0964	No
94	PHF15	1430081_at 1455345_at	11803	0.271	0.0932	No
95	PRPF4B	1425497_a_at 1425498_at 1436427_at 1451732_at 1451909_a_at 1455696_a_at	11806	0.271	0.0940	No
96	KCNA6	1421568_at 1441049_at 1456954_at	11885	0.263	0.0912	No
97	RPS20	1456373_x_at 1456436_x_at	12185	0.233	0.0782	No
98	FANCC	1442265_at 1447632_at 1450861_at	12263	0.226	0.0753	No
99	PVRL1	1438111_at 1438421_at 1440131_at 1446488_at 1450819_at	12794	0.165	0.0515	No
100	RAVER1	1427110_at 1427111_s_at 1444966_at	13088	0.130	0.0385	No
101	YBX2	1420762_a_at	13658	0.059	0.0125	No
102	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	13992	0.016	-0.0027	No
103	MYH10	1441057_at 1452740_at	14004	0.014	-0.0032	No
104	RASAL2	1436910_at 1444671_at	14161	-0.007	-0.0103	No
105	ARHGAP6	1417704_a_at 1451867_x_at 1456333_a_at	14301	-0.029	-0.0166	No
106	CTNND2	1422592_at 1438891_at 1443638_at 1445114_at 1447552_s_at 1456116_at	14716	-0.092	-0.0354	No
107	TOPBP1	1452241_at 1458480_at	15141	-0.160	-0.0543	No
108	TYRO3	1425248_a_at 1425249_a_at	15300	-0.185	-0.0610	No
109	FANCG	1420960_at	15516	-0.224	-0.0702	No
110	DNAJC5G	1437814_at	15656	-0.250	-0.0758	No
111	PIM1	1423006_at 1435458_at	15787	-0.279	-0.0809	No
112	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	16053	-0.337	-0.0920	No
113	FMO4	1425799_at 1444852_at	16265	-0.386	-0.1005	No
114	MXD3	1422970_at 1438847_at 1448878_at	16289	-0.394	-0.1004	No
115	ATE1	1420036_at 1420651_at 1420652_at 1435173_at 1446611_at 1449709_s_at	16353	-0.409	-0.1020	No
116	CASP8AP2	1449217_at	16798	-0.528	-0.1208	No
117	KLF5	1430255_at 1451021_a_at 1451739_at	17065	-0.615	-0.1311	No
118	PPM1D	1434142_at 1449092_at 1459069_at	17196	-0.659	-0.1350	No
119	CDC25A	1417131_at 1417132_at 1445995_at	17222	-0.670	-0.1341	No
120	MSH5	1430771_a_at 1449537_at	17344	-0.711	-0.1374	No
121	BRMS1L	1452850_s_at 1460443_at	17345	-0.711	-0.1352	No
122	EED	1448653_at	17407	-0.739	-0.1357	No
123	SUMO1	1438289_a_at 1444557_at 1451005_at 1456349_x_at	17594	-0.817	-0.1417	No
124	HCN3	1451023_at	17635	-0.833	-0.1410	No
125	STAG2	1421849_at 1450396_at	17670	-0.846	-0.1399	No
126	ACBD6	1452601_a_at 1453199_at	17693	-0.854	-0.1383	No
127	ADAMTS2	1435990_at 1455720_at 1457058_at	17774	-0.892	-0.1392	No
128	PRKDC	1451576_at	18211	-1.043	-0.1560	No
129	ACO2	1436934_s_at 1442102_at 1451002_at	18268	-1.064	-0.1553	No
130	SSBP3	1425940_a_at 1427917_s_at 1439136_at 1443554_at 1457560_at 1458749_at	18365	-1.105	-0.1563	No
131	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	18474	-1.157	-0.1576	No
132	TMPO	1421237_at 1426020_at 1426349_s_at 1428976_at 1452036_a_at	18495	-1.167	-0.1549	No
133	IL4I1	1419192_at	18576	-1.204	-0.1549	No
134	IPO7	1442511_at 1454955_at 1458165_at	19024	-1.446	-0.1709	No
135	STAG1	1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at	19049	-1.462	-0.1675	No
136	USP37	1434242_at 1438212_at	19174	-1.552	-0.1684	No
137	CCNT1	1419313_at 1456477_at	19227	-1.582	-0.1659	No
138	PHF13	1455175_at	19317	-1.641	-0.1649	No
139	HNRPUL1	1451984_at	19393	-1.699	-0.1631	No
140	SP3	1431804_a_at 1459360_at	19471	-1.754	-0.1612	No
141	PHC1	1423212_at	19605	-1.878	-0.1615	No
142	TBX6	1449868_at	19608	-1.881	-0.1557	No
143	ZCCHC8	1423755_at 1441639_at	19867	-2.062	-0.1612	No
144	MAZ	1427099_at	19890	-2.077	-0.1558	No
145	ALDH6A1	1448104_at	19964	-2.141	-0.1525	No
146	SLCO3A1	1418030_at 1434537_at 1448918_at	20008	-2.185	-0.1477	No
147	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	20198	-2.362	-0.1491	No
148	RBBP4	1434892_x_at 1442443_at 1454791_a_at 1454875_a_at 1456260_at	20226	-2.396	-0.1429	No
149	NUP62	1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at	20265	-2.430	-0.1371	No
150	DCK	1428838_a_at 1439012_a_at 1449176_a_at	20266	-2.433	-0.1295	No
151	HNRPR	1427129_a_at 1438807_at 1452030_a_at	20509	-2.740	-0.1322	No
152	CTCF	1418330_at 1449042_at	20704	-3.033	-0.1317	No
153	E2F7	1437187_at	20960	-3.504	-0.1325	No
154	UGCGL1	1432318_at 1448009_at 1455839_at	21031	-3.660	-0.1244	No
155	H2AFZ	1441370_at	21198	-4.032	-0.1196	No
156	USP52	1426700_a_at	21235	-4.128	-0.1084	No
157	KBTBD7	1428192_at 1439865_at 1452700_s_at	21484	-5.084	-0.1041	No
158	ERBB2IP	1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at	21501	-5.169	-0.0888	No
159	MCM3	1420029_at 1426653_at	21664	-6.234	-0.0769	No
160	ARID4A	1436191_at 1438464_at 1456420_at	21683	-6.386	-0.0580	No
161	ID3	1416630_at	21719	-6.663	-0.0389	No
162	FLI1	1422024_at 1433512_at 1441584_at	21767	-7.169	-0.0189	No
163	H2AFV	1428029_a_at 1436596_at	21933	-8.580	0.0001	No