Details for gene set V$AP2_Q6

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$AP2_Q6_01
Enrichment Score (ES)	-0.38689002
Normalized Enrichment Score (NES)	-1.5553228
Nominal p-value	0.0
FDR q-value	0.097522624
FWER p-Value	0.675

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	MTCH2	1430474_a_at 1430969_at 1437806_x_at 1438842_at 1438843_x_at 1448654_at	47	8.863	0.0274	No
2	UBTF	1453097_a_at 1455490_at 1460304_a_at	259	5.442	0.0358	No
3	PTK7	1452589_at	273	5.356	0.0530	No
4	RPL36AL	1448697_s_at	562	4.164	0.0537	No
5	LHX2	1418317_at	787	3.579	0.0553	No
6	UBE2S	1416726_s_at 1430962_at	871	3.404	0.0628	No
7	EIF4G2	1415863_at 1452758_s_at	983	3.206	0.0684	No
8	ITPKA	1424037_at	1130	2.986	0.0716	No
9	RGMA	1438241_at	1588	2.492	0.0589	No
10	CIRBP	1416332_at	1816	2.288	0.0561	No
11	ARF3	1421789_s_at 1423973_a_at 1434787_at 1437331_a_at 1456007_at	1876	2.237	0.0608	No
12	ST7	1418967_a_at	2004	2.143	0.0621	No
13	RASIP1	1428016_a_at	2050	2.111	0.0671	No
14	CGREF1	1424528_at 1424529_s_at	2076	2.092	0.0729	No
15	CRSP7	1452282_at 1458377_at	2226	1.993	0.0727	No
16	GRK6	1437436_s_at 1450480_a_at 1451672_at	2235	1.990	0.0790	No
17	B4GALT1	1418014_a_at 1458616_at 1458773_at	2331	1.934	0.0811	No
18	FOXA3	1431900_a_at	2529	1.821	0.0781	No
19	FBXL11	1435329_at 1443336_at 1444358_at 1455942_at 1458449_at	2572	1.798	0.0821	No
20	ASCL1	1437086_at 1450164_at	2704	1.749	0.0819	No
21	BTBD14B	1420968_at 1420969_at 1433139_at 1433140_a_at 1443382_s_at 1458200_at	2756	1.731	0.0853	No
22	IGSF4	1417376_a_at 1417377_at 1417378_at 1431611_a_at	2902	1.680	0.0843	No
23	FXYD1	1421374_a_at	3402	1.509	0.0664	No
24	TFEB	1422566_at	3464	1.487	0.0685	No
25	EYA1	1421727_at 1443117_at 1457424_at	3606	1.442	0.0668	No
26	HOXB2	1444204_at 1449397_at	3730	1.400	0.0658	No
27	KCNK3	1425341_at 1425342_a_at 1426058_a_at	3737	1.397	0.0702	No
28	ERF	1422114_at 1435561_at	3738	1.396	0.0749	No
29	KCNQ4	1435721_at 1442909_at	3850	1.367	0.0743	No
30	CEECAM1	1435345_at	3880	1.362	0.0775	No
31	CLDN5	1417839_at	4100	1.308	0.0718	No
32	RHBDF1	1424138_at	4201	1.288	0.0715	No
33	SLC18A3	1422203_at	4300	1.268	0.0712	No
34	PLCB3	1448661_at	4500	1.231	0.0662	No
35	MN1	1454867_at	4509	1.229	0.0699	No
36	PAQR4	1423101_at	4516	1.229	0.0737	No
37	FKBP14	1433481_at 1458225_at	4632	1.205	0.0725	No
38	FGD1	1416865_at 1437369_at 1459278_at	4764	1.179	0.0704	No
39	STMN1	1415849_s_at	4840	1.165	0.0708	No
40	MGAT4B	1424720_at	4916	1.151	0.0712	No
41	PTMA	1423455_at	5264	1.088	0.0588	No
42	WNT5A	1436791_at 1448818_at 1456976_at	5277	1.086	0.0619	No
43	OSR2	1426155_a_at 1430950_at	5279	1.086	0.0655	No
44	FGF11	1421793_at 1439959_at	5332	1.076	0.0667	No
45	KLF13	1432543_a_at 1456030_at	5344	1.073	0.0698	No
46	TRIM28	1415869_a_at 1456308_x_at	5510	1.048	0.0657	No
47	GPR3	1460275_at	5657	1.028	0.0624	No
48	RBM6	1417213_a_at 1440223_at 1452466_a_at 1458912_at	5712	1.021	0.0633	No
49	PGF	1418471_at	5907	0.998	0.0577	No
50	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	6042	0.981	0.0548	No
51	NCOA6IP	1421904_at 1421905_at 1439710_at 1446164_at 1450400_at 1450401_at	6059	0.979	0.0573	No
52	GNG8	1457755_at	6294	0.943	0.0497	No
53	HPN	1420712_a_at	6340	0.936	0.0508	No
54	EPHB1	1455188_at	6384	0.929	0.0519	No
55	PPP2R5A	1423911_at 1440189_at 1444036_at	6391	0.929	0.0547	No
56	POFUT1	1443881_at 1450137_at 1456323_at	6411	0.926	0.0569	No
57	CPSF4	1424469_a_at	6465	0.918	0.0575	No
58	PORCN	1424220_a_at 1438753_at	6919	0.851	0.0395	No
59	SPATA6	1418650_at 1418651_at 1438023_at 1445355_at	7338	0.795	0.0230	No
60	APLP1	1416134_at 1435857_s_at	7430	0.784	0.0214	No
61	CNNM4	1421635_at 1431233_at	7564	0.767	0.0178	No
62	SLC17A7	1428986_at	7616	0.760	0.0180	No
63	CNP	1418980_a_at 1437341_x_at 1449296_a_at	7842	0.730	0.0101	No
64	NTF5	1440353_at	7921	0.721	0.0089	No
65	HOXB9	1452317_at	8253	0.676	-0.0040	No
66	MAFB	1451715_at 1451716_at	8389	0.658	-0.0081	No
67	ANP32A	1421918_at 1434555_at 1450407_a_at	8737	0.617	-0.0220	No
68	ATP5H	1423676_at 1435112_a_at	8773	0.613	-0.0215	No
69	GP1BB	1422977_at 1456427_at	8963	0.591	-0.0282	No
70	KCNJ12	1422871_at	8993	0.587	-0.0276	No
71	HEY1	1415999_at	9341	0.546	-0.0417	No
72	LRFN5	1441502_at 1454687_at	9360	0.543	-0.0408	No
73	NR2E1	1434921_at 1457289_at	9646	0.510	-0.0522	No
74	SALL1	1450489_at	10417	0.426	-0.0862	No
75	CENTG2	1435432_at 1435433_at 1437394_at 1442632_at 1457978_at 1459053_at 1459389_at	10519	0.416	-0.0894	No
76	CPEB3	1437765_at 1445868_at 1455372_at 1456048_at	10693	0.397	-0.0960	No
77	NXPH3	1419710_at	10784	0.386	-0.0989	No
78	ACVR2B	1419140_at 1439856_at	10814	0.381	-0.0990	No
79	EFNB3	1423085_at	10838	0.379	-0.0987	No
80	POU5F1	1417945_at	11030	0.359	-0.1063	No
81	ADRB1	1423420_at	11051	0.356	-0.1061	No
82	KCNH5	1441742_at	11415	0.314	-0.1217	No
83	SLC6A11	1433989_at 1453871_at	11550	0.299	-0.1269	No
84	TMEM25	1436644_x_at 1452962_at	11634	0.290	-0.1297	No
85	SPRED1	1423160_at 1423161_s_at 1423162_s_at 1428777_at 1441517_at 1442859_at 1443652_x_at 1445228_at 1452911_at 1460116_s_at	11703	0.284	-0.1319	No
86	PHF15	1430081_at 1455345_at	11803	0.271	-0.1355	No
87	SLC25A28	1424776_a_at	11948	0.256	-0.1413	No
88	FMNL1	1445636_at 1450212_at	11958	0.255	-0.1409	No
89	SMARCD1	1448913_at	12123	0.239	-0.1476	No
90	IL11	1449982_at	12183	0.233	-0.1496	No
91	SYMPK	1428673_at	12203	0.231	-0.1497	No
92	ACCN1	1417994_a_at	12226	0.229	-0.1499	No
93	DGCR8	1422981_at 1435439_at 1446169_at 1455311_at	12434	0.206	-0.1587	No
94	PFKFB3	1416432_at 1419882_at 1456676_a_at	12452	0.203	-0.1588	No
95	SYT7	1423012_at 1441927_at 1446641_at 1460081_at	12551	0.194	-0.1627	No
96	MESDC1	1416397_at 1416398_at	12553	0.194	-0.1621	No
97	PPM1E	1434990_at 1445741_at	12891	0.153	-0.1771	No
98	FASTK	1460635_at	12903	0.152	-0.1771	No
99	TACC2	1425745_a_at 1447891_at	13137	0.125	-0.1874	No
100	COL12A1	1427391_a_at 1445751_at	13167	0.121	-0.1883	No
101	DBN1	1426024_a_at 1451734_a_at	13376	0.096	-0.1976	No
102	PLXNC1	1423213_at 1423214_at 1443433_at 1443434_s_at 1450905_at 1450906_at	13432	0.090	-0.1998	No
103	SOX2	1416967_at	13537	0.077	-0.2043	No
104	HOXA1	1420565_at	13554	0.075	-0.2048	No
105	CXXC5	1431469_a_at 1448960_at	13566	0.073	-0.2051	No
106	THRAP1	1436904_at 1438725_at 1444068_at 1446840_at 1453160_at 1453161_at	13689	0.055	-0.2105	No
107	ADAMTS5	1422561_at 1450658_at 1456404_at	13704	0.053	-0.2109	No
108	MYH10	1441057_at 1452740_at	14004	0.014	-0.2246	No
109	CHAT	1440070_at	14457	-0.052	-0.2453	No
110	FGF9	1420795_at 1438718_at 1445258_at	14829	-0.109	-0.2619	No
111	CCNG1	1420827_a_at 1450016_at 1450017_at	15008	-0.138	-0.2697	No
112	CAMTA2	1426901_s_at 1452229_at	15221	-0.173	-0.2788	No
113	KCNAB3	1421790_a_at 1423950_at	15232	-0.174	-0.2787	No
114	TLK2	1416944_a_at 1431827_a_at 1454018_at 1457357_at	15509	-0.222	-0.2907	No
115	GPR12	1449472_at 1457702_at	15531	-0.226	-0.2909	No
116	PDGFB	1450413_at 1450414_at	15584	-0.236	-0.2925	No
117	NCOA2	1435233_at 1435234_at 1446827_at 1450458_at	15867	-0.294	-0.3045	No
118	MGAT2	1426350_at 1452037_at	16021	-0.329	-0.3104	No
119	MKNK2	1418300_a_at 1449029_at	16046	-0.335	-0.3104	No
120	RFX1	1422109_at 1436059_at	16215	-0.372	-0.3169	No
121	SLC7A10	1421093_at	16396	-0.419	-0.3238	No
122	C1ORF24	1422567_at 1454942_at	16669	-0.488	-0.3346	No
123	PRDM16	1429308_at 1429309_at 1440745_at 1440870_at 1443251_at	16738	-0.510	-0.3361	No
124	DNMT3A	1423063_at 1423064_at 1423065_at 1423066_at 1442309_at 1460324_at	16777	-0.524	-0.3361	No
125	NRF1	1420978_at 1424787_a_at 1434627_at 1439545_at 1445914_at	16813	-0.533	-0.3359	No
126	MIB1	1433853_at 1446818_at 1451818_at 1454740_at	16864	-0.548	-0.3364	No
127	KCNH8	1440980_at 1459015_at	16981	-0.589	-0.3397	No
128	ZNRF2	1431154_at 1434016_at 1434017_at 1444735_at 1455290_at 1455291_s_at	17008	-0.596	-0.3389	No
129	SFRS16	1428961_a_at	17137	-0.640	-0.3427	No
130	ARID1A	1447104_at	17183	-0.655	-0.3426	No
131	RAD21	1416161_at 1416162_at 1455938_x_at	17198	-0.660	-0.3410	No
132	DMPK	1422989_a_at 1434944_at	17219	-0.669	-0.3397	No
133	OAZ2	1426763_at 1426764_at 1442541_at 1442735_at	17333	-0.705	-0.3426	No
134	HDLBP	1415987_at 1415988_at 1419806_at 1419869_s_at 1443546_at 1449615_s_at	17502	-0.777	-0.3477	No
135	CYB561D1	1431021_at 1434226_at 1459837_at	17755	-0.883	-0.3564	No
136	CHD4	1436343_at 1438476_a_at 1451295_a_at	17819	-0.912	-0.3562	No
137	PIP5K2B	1427438_at 1435068_at 1441164_at 1444128_at	17909	-0.951	-0.3571	No
138	SLC37A4	1417042_at	17958	-0.966	-0.3561	No
139	NFYC	1448963_at	18061	-1.002	-0.3575	No
140	CDK9	1417269_at 1457240_at	18094	-1.009	-0.3556	No
141	SH3BP4	1416305_at 1455250_at	18132	-1.020	-0.3539	No
142	PLAGL2	1417517_at 1417518_at 1417519_at 1442235_at	18185	-1.035	-0.3528	No
143	FNBP1	1426983_at 1451806_at 1453746_at 1458639_at 1460047_at	18362	-1.104	-0.3572	No
144	SMAD7	1423389_at 1440952_at 1443771_x_at	18418	-1.129	-0.3560	No
145	ADIPOR1	1424312_at 1439017_x_at 1451311_a_at	18580	-1.205	-0.3594	No
146	RAB35	1433922_at	19179	-1.553	-0.3817	Yes
147	DTNB	1437651_a_at 1445329_at 1446012_at	19192	-1.564	-0.3771	Yes
148	GLTP	1419027_s_at	19313	-1.639	-0.3771	Yes
149	DLGAP4	1426465_at 1455548_at	19453	-1.740	-0.3777	Yes
150	RASGRP2	1417804_at 1438932_at 1438933_x_at 1442264_at 1449613_at	19552	-1.828	-0.3761	Yes
151	SLC12A4	1417446_at	19619	-1.891	-0.3729	Yes
152	PICALM	1441328_at 1443218_at 1446968_at 1451316_a_at 1455773_at	19635	-1.899	-0.3672	Yes
153	PSCD2	1450103_a_at	19704	-1.958	-0.3638	Yes
154	NEO1	1423513_at 1434931_at 1440789_at 1444295_at 1447693_s_at 1447694_x_at 1459485_at	19718	-1.971	-0.3579	Yes
155	KIF3C	1434947_at 1448946_at	19808	-2.027	-0.3552	Yes
156	BAHD1	1433703_s_at	19824	-2.039	-0.3491	Yes
157	RAP1GDS1	1425266_a_at 1459768_x_at	19915	-2.097	-0.3462	Yes
158	CENTD2	1428064_at	19949	-2.125	-0.3407	Yes
159	CELSR2	1422073_a_at 1435336_at	20257	-2.425	-0.3467	Yes
160	LDB1	1452024_a_at	20278	-2.445	-0.3395	Yes
161	PCTK1	1415956_a_at 1438314_at 1443296_at 1460169_a_at	20443	-2.647	-0.3382	Yes
162	RNF40	1438191_a_at	20470	-2.680	-0.3305	Yes
163	ANGPTL2	1421002_at 1431848_at	20650	-2.947	-0.3289	Yes
164	CTCF	1418330_at 1449042_at	20704	-3.033	-0.3212	Yes
165	NCOA6	1423374_at	20816	-3.226	-0.3156	Yes
166	RDH10	1426968_a_at 1460632_at	20821	-3.235	-0.3050	Yes
167	FBS1	1425276_at 1451645_at	20857	-3.296	-0.2956	Yes
168	MAP3K7IP2	1423462_at 1451003_at	20887	-3.362	-0.2858	Yes
169	BCAT2	1425764_a_at	21079	-3.737	-0.2821	Yes
170	SIPA1	1416206_at	21158	-3.919	-0.2726	Yes
171	PHF1	1416542_at	21211	-4.057	-0.2615	Yes
172	TRIM39	1418851_at	21234	-4.127	-0.2488	Yes
173	MGEA5	1422900_at 1422901_at 1422902_s_at 1433654_at 1439081_at	21243	-4.148	-0.2353	Yes
174	TERF2	1421147_at 1455651_at 1459650_at	21248	-4.163	-0.2216	Yes
175	CIC	1415746_at	21305	-4.357	-0.2097	Yes
176	CRY1	1433733_a_at	21580	-5.660	-0.2034	Yes
177	BCOR	1428773_s_at 1429438_at 1452910_at	21593	-5.712	-0.1850	Yes
178	KCNH2	1449544_a_at	21662	-6.212	-0.1674	Yes
179	VEGF	1420909_at 1451959_a_at	21679	-6.362	-0.1469	Yes
180	BCL6	1421818_at 1450381_a_at	21780	-7.247	-0.1274	Yes
181	PIAS1	1422581_at 1446448_at 1455486_at 1455611_at	21804	-7.438	-0.1037	Yes
182	MLL5	1427236_a_at 1432601_at 1434704_at 1439107_a_at 1439108_at	21863	-7.842	-0.0802	Yes
183	JMJD1B	1428320_at 1438508_at 1458417_at	21910	-8.201	-0.0550	Yes
184	EGR3	1421486_at 1436329_at	21913	-8.258	-0.0276	Yes
185	PABPC1	1418883_a_at 1419500_at 1453840_at	21934	-8.586	0.0001	Yes