Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | PTENPATHWAY |
| Enrichment Score (ES) | -0.7118547 |
| Normalized Enrichment Score (NES) | -1.8377017 |
| Nominal p-value | 0.002096436 |
| FDR q-value | 0.04994037 |
| FWER p-Value | 0.57 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | AKT1 | 1416657_at 1425711_a_at 1440950_at 1442759_at | 5518 | 1.047 | -0.2217 | No | ||
| 2 | MAPK1 | 1419568_at 1426585_s_at 1442876_at 1453104_at | 6326 | 0.939 | -0.2316 | No | ||
| 3 | PTEN | 1422553_at 1441593_at 1444325_at 1450655_at 1454722_at 1455728_at 1457493_at | 10105 | 0.457 | -0.3909 | No | ||
| 4 | BCAR1 | 1439388_s_at 1450622_at | 14615 | -0.077 | -0.5944 | No | ||
| 5 | SHC1 | 1422853_at 1422854_at | 14924 | -0.125 | -0.6048 | No | ||
| 6 | PIK3CA | 1423144_at 1429434_at 1429435_x_at 1440054_at 1453134_at 1460326_at | 14972 | -0.133 | -0.6032 | No | ||
| 7 | PIK3R1 | 1425514_at 1425515_at 1438682_at 1444591_at 1451737_at | 15248 | -0.177 | -0.6106 | No | ||
| 8 | GRB2 | 1418508_a_at 1449111_a_at | 17468 | -0.764 | -0.6900 | Yes | ||
| 9 | ITGB1 | 1426918_at 1426919_at 1426920_x_at 1427771_x_at 1438119_at 1452545_a_at | 17781 | -0.895 | -0.6785 | Yes | ||
| 10 | FOXO3A | 1434831_a_at 1434832_at 1439598_at 1444226_at 1450236_at 1458279_at | 18027 | -0.992 | -0.6613 | Yes | ||
| 11 | SOS1 | 1421884_at 1421885_at 1421886_at | 18731 | -1.279 | -0.6566 | Yes | ||
| 12 | MAPK3 | 1427060_at | 19380 | -1.691 | -0.6377 | Yes | ||
| 13 | ILK | 1449942_a_at | 19888 | -2.075 | -0.6013 | Yes | ||
| 14 | PDPK1 | 1415729_at 1416501_at 1459775_at 1459776_x_at | 21147 | -3.899 | -0.5469 | Yes | ||
| 15 | PDK2 | 1448825_at | 21401 | -4.705 | -0.4235 | Yes | ||
| 16 | PTK2 | 1423059_at 1430827_a_at 1439198_at 1440082_at 1441475_at 1443384_at 1445137_at | 21846 | -7.797 | -0.2202 | Yes | ||
| 17 | CDKN1B | 1419497_at 1434045_at | 21856 | -7.819 | 0.0036 | Yes |
