Details for gene set PENG_RAPAMYCIN

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	PENG_RAPAMYCIN_DN
Enrichment Score (ES)	0.5609723
Normalized Enrichment Score (NES)	2.2427154
Nominal p-value	0.0
FDR q-value	0.0
FWER p-Value	0.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	EBNA1BP2	1428315_at 1437512_x_at 1439898_at 1457668_x_at	7	9.579	0.0230	Yes
2	CYCS	1422484_at 1445484_at	10	9.442	0.0460	Yes
3	C1QBP	1448274_at 1455821_x_at	41	8.945	0.0664	Yes
4	SLC29A1	1451782_a_at	70	8.351	0.0855	Yes
5	TRIP13	1429294_at 1429295_s_at 1446760_at	109	7.195	0.1013	Yes
6	CCT6A	1423517_at 1455988_a_at	121	7.014	0.1179	Yes
7	GOT2	1417715_a_at 1417716_at	123	6.994	0.1349	Yes
8	TCP1	1442317_at 1448122_at	127	6.951	0.1517	Yes
9	AMD1	1448484_at	154	6.532	0.1665	Yes
10	SLC7A5	1418326_at	164	6.405	0.1817	Yes
11	DDX21	1448270_at 1448271_a_at	178	6.224	0.1963	Yes
12	MRPL12	1452048_at	221	5.763	0.2084	Yes
13	ETFA	1423972_at	255	5.459	0.2202	Yes
14	CTPS	1416563_at	268	5.392	0.2328	Yes
15	SQLE	1415993_at	280	5.333	0.2453	Yes
16	CCT5	1417258_at	303	5.162	0.2569	Yes
17	SRM	1421260_a_at	314	5.122	0.2689	Yes
18	ATF5	1425927_a_at	327	5.060	0.2807	Yes
19	SNRPA1	1417351_a_at 1417352_s_at 1417353_x_at	342	5.011	0.2923	Yes
20	ASNS	1433966_x_at 1451095_at	406	4.724	0.3009	Yes
21	EIF3S9	1426674_at	418	4.691	0.3118	Yes
22	TIMM17A	1426256_at	421	4.688	0.3232	Yes
23	RARS	1416312_at	428	4.637	0.3342	Yes
24	WDR18	1433635_at 1443758_at 1454695_at 1460622_x_at	474	4.442	0.3430	Yes
25	MORF4L2	1415778_at 1439413_x_at	480	4.420	0.3535	Yes
26	RNU3IP2	1451293_at	496	4.358	0.3635	Yes
27	CDK4	1422441_x_at	544	4.192	0.3715	Yes
28	HSPE1	1450668_s_at	605	4.019	0.3786	Yes
29	CYC1	1416604_at	611	3.995	0.3881	Yes
30	NOL5A	1426533_at 1455035_s_at	614	3.987	0.3977	Yes
31	GTF2A2	1433528_at	624	3.962	0.4070	Yes
32	PPIF	1416940_at 1438955_x_at	664	3.869	0.4146	Yes
33	RTCD1	1424095_at	783	3.585	0.4180	Yes
34	NARS	1428666_at 1452866_at	791	3.567	0.4263	Yes
35	SF3A3	1423811_at	852	3.461	0.4320	Yes
36	FASN	1423828_at	869	3.405	0.4396	Yes
37	NOL1	1424019_at	889	3.371	0.4469	Yes
38	EIF4G2	1415863_at 1452758_s_at	983	3.206	0.4505	Yes
39	SDHB	1418005_at	1060	3.090	0.4545	Yes
40	TARS	1460323_at	1128	2.990	0.4587	Yes
41	AK2	1448450_at 1448451_at	1145	2.961	0.4652	Yes
42	MARS	1455951_at	1345	2.749	0.4628	Yes
43	YARS	1460638_at	1374	2.715	0.4681	Yes
44	TUBG1	1417144_at	1390	2.702	0.4740	Yes
45	EEF1E1	1444757_at 1449044_at	1432	2.660	0.4786	Yes
46	CCT2	1416037_a_at 1433534_a_at 1433535_x_at	1480	2.613	0.4828	Yes
47	GCN5L2	1422971_at 1422972_s_at 1426783_at	1499	2.593	0.4883	Yes
48	POLR2B	1433552_a_at	1508	2.583	0.4943	Yes
49	RAB1A	1416082_at 1448210_at 1457537_at	1531	2.565	0.4995	Yes
50	CD47	1419554_at 1428187_at 1430997_at 1449507_a_at 1458634_at 1459908_at	1533	2.563	0.5057	Yes
51	NME1	1424110_a_at 1435277_x_at	1586	2.494	0.5094	Yes
52	LDHB	1416183_a_at 1434499_a_at 1442618_at 1448237_x_at 1455235_x_at	1713	2.375	0.5094	Yes
53	BCS1L	1451541_at	1770	2.328	0.5125	Yes
54	MRPS12	1448799_s_at	1791	2.316	0.5173	Yes
55	PSMD5	1423234_at	1799	2.309	0.5226	Yes
56	PSMD8	1423296_at	1817	2.287	0.5274	Yes
57	HYOU1	1423290_at 1423291_s_at 1451913_a_at	1858	2.251	0.5310	Yes
58	PRDX3	1416292_at	1874	2.238	0.5358	Yes
59	CSE1L	1448809_at	1930	2.198	0.5386	Yes
60	USP10	1448230_at	1948	2.183	0.5432	Yes
61	PSMB5	1415676_a_at	1978	2.164	0.5471	Yes
62	GM2A	1416188_at 1448241_at	2218	1.997	0.5410	Yes
63	NDUFS3	1423737_at	2267	1.973	0.5436	Yes
64	PITPNB	1420307_a_at 1421013_at 1434257_s_at 1454892_at	2294	1.955	0.5472	Yes
65	NDUFA9	1416663_at	2363	1.910	0.5487	Yes
66	IDH3A	1422500_at 1422501_s_at 1432016_a_at 1447701_x_at	2394	1.895	0.5520	Yes
67	NP	1416530_a_at	2449	1.866	0.5540	Yes
68	RABGGTB	1419553_a_at	2457	1.863	0.5583	Yes
69	EBP	1416667_at	2567	1.802	0.5576	Yes
70	UBE2M	1424345_s_at 1425858_at	2624	1.778	0.5594	Yes
71	IDI1	1423804_a_at 1451122_at	2684	1.755	0.5610	Yes
72	EIF4G1	1427036_a_at 1427037_at 1438686_at	2802	1.715	0.5598	No
73	SLC3A2	1425364_a_at	2914	1.676	0.5588	No
74	RPS26	1415876_a_at	3119	1.598	0.5533	No
75	DDX3X	1416467_at 1423042_at 1423043_s_at	3150	1.586	0.5558	No
76	PFKM	1416780_at	3337	1.529	0.5510	No
77	WBSCR22	1423575_a_at	3398	1.510	0.5519	No
78	P2RX5	1449433_at	3523	1.468	0.5498	No
79	ACVRL1	1435825_at 1451604_a_at	3572	1.453	0.5511	No
80	IFI30	1422476_at	3709	1.407	0.5483	No
81	SSBP1	1427965_at 1430294_at 1444053_at 1452616_s_at 1452617_at	3881	1.361	0.5438	No
82	ATP5G3	1454661_at	4186	1.290	0.5329	No
83	S100A4	1424542_at	4895	1.154	0.5032	No
84	DNAJA1	1416288_at 1437220_x_at 1445729_at 1459835_s_at 1460179_at	4912	1.152	0.5053	No
85	BTK	1422755_at	4976	1.137	0.5052	No
86	GSPT1	1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at	4997	1.133	0.5070	No
87	ACAT2	1435630_s_at	5002	1.132	0.5096	No
88	EMP3	1417104_at	5020	1.128	0.5116	No
89	UBE2L3	1417907_at 1417908_s_at 1448879_at 1448880_at	5636	1.031	0.4858	No
90	CTSC	1416382_at 1437939_s_at 1446834_at	6338	0.937	0.4559	No
91	SLC39A14	1425649_at 1427035_at 1438490_at 1457770_at	6504	0.913	0.4505	No
92	TFRC	1422966_a_at 1422967_a_at 1452661_at AFFX-TransRecMur/X57349_3_at AFFX-TransRecMur/X57349_5_at AFFX-TransRecMur/X57349_M_at	6519	0.911	0.4521	No
93	RTN4	1421116_a_at 1435284_at 1437224_at 1439650_at 1442760_x_at 1452649_at	6550	0.906	0.4529	No
94	POLR2F	1415754_at 1427402_at	6704	0.884	0.4481	No
95	COPB2	1452102_at 1456175_a_at	6830	0.866	0.4444	No
96	RAE1	1429528_at 1444256_at 1459822_at	7083	0.829	0.4349	No
97	CHERP	1431770_at 1436885_a_at 1451896_a_at	7099	0.826	0.4362	No
98	RNASEH1	1453833_a_at	7248	0.805	0.4314	No
99	GLO1	1424108_at 1424109_a_at 1436070_at 1451240_a_at	7417	0.785	0.4256	No
100	EIF2B4	1449940_a_at	7640	0.757	0.4172	No
101	UCHL1	1448260_at	7712	0.749	0.4158	No
102	XBP1	1420011_s_at 1420012_at 1420886_a_at 1437223_s_at	7859	0.728	0.4108	No
103	PTRF	1421431_at 1424130_a_at 1453891_at	8596	0.633	0.3786	No
104	BCAP31	1451049_at 1456279_a_at	9006	0.586	0.3612	No
105	PIP5K1A	1421833_at 1421834_at 1450389_s_at	9599	0.515	0.3353	No
106	NUP98	1434220_at 1439154_at 1446397_at 1446988_at	9739	0.500	0.3301	No
107	CAPZA2	1423057_at 1423058_at	10178	0.451	0.3111	No
108	WNT10B	1426091_a_at	10257	0.443	0.3086	No
109	HCCS	1420889_at 1420890_at	10347	0.434	0.3055	No
110	COX11	1429188_at 1457846_at	10707	0.396	0.2900	No
111	ATP1B3	1423126_at	10725	0.393	0.2902	No
112	AHSA1	1424147_at 1444500_at	11270	0.331	0.2660	No
113	HSPA4	1416146_at 1416147_at 1440575_at	11275	0.331	0.2666	No
114	PPIB	1437649_x_at 1450911_at	11300	0.328	0.2663	No
115	BMP1	1426238_at 1427457_a_at 1427458_at 1446007_at	12706	0.177	0.2022	No
116	GTF3C1	1434066_at 1438425_at 1456024_at 1459673_at	13459	0.086	0.1678	No
117	PHB	1435144_at 1442233_at 1448563_at	13509	0.081	0.1658	No
118	ETF1	1420023_at 1420024_s_at 1424013_at 1440629_at 1451208_at	13633	0.064	0.1603	No
119	MLF2	1423916_s_at	13654	0.060	0.1595	No
120	SAFB	1432911_at 1454415_at 1454928_at 1454929_s_at	13997	0.015	0.1438	No
121	GCDH	1448717_at	14014	0.013	0.1431	No
122	SCD	1415964_at 1415965_at	14196	-0.013	0.1349	No
123	DAP3	1450848_at	14419	-0.045	0.1248	No
124	IDH3B	1418885_a_at 1418886_s_at 1441271_at	14593	-0.074	0.1170	No
125	MYCBP	1421165_at 1427938_at 1427939_s_at 1427940_s_at 1452608_at	15077	-0.149	0.0952	No
126	HSPA5	1416064_a_at 1427464_s_at 1447824_x_at	15179	-0.166	0.0909	No
127	KPNA3	1421828_at 1445527_at 1446538_at 1450385_at 1450386_at	15286	-0.183	0.0865	No
128	EIF2B2	1434538_x_at 1437428_x_at 1451136_a_at	15293	-0.185	0.0867	No
129	HADH2	1438391_x_at 1448286_at	15463	-0.214	0.0794	No
130	MMP15	1422597_at 1437462_x_at 1439734_at	15544	-0.229	0.0763	No
131	TIMM44	1417670_at 1439371_x_at 1448801_a_at	15836	-0.288	0.0636	No
132	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	16053	-0.337	0.0545	No
133	PSMD11	1429370_a_at 1432726_at 1456059_at 1456104_at	16256	-0.383	0.0462	No
134	CCNC	1417861_at 1428570_at 1454144_a_at 1454336_at	16367	-0.412	0.0421	No
135	JTB	1424283_at	16515	-0.447	0.0365	No
136	DHCR24	1418129_at 1451895_a_at	16556	-0.459	0.0358	No
137	ICT1	1444276_at 1460308_a_at	16610	-0.476	0.0345	No
138	PTDSS1	1416372_at 1441866_s_at 1449739_at	16644	-0.483	0.0342	No
139	NMT1	1415683_at 1418082_at 1454941_at	17050	-0.610	0.0170	No
140	PTPN1	1417068_a_at 1438670_at	17061	-0.612	0.0181	No
141	FKBP4	1416362_a_at 1416363_at 1458729_at 1459808_at	17107	-0.627	0.0175	No
142	RAB14	1415686_at 1419243_at 1419244_a_at 1419245_at 1419246_s_at 1439687_at 1441992_at	17205	-0.661	0.0147	No
143	CDC25A	1417131_at 1417132_at 1445995_at	17222	-0.670	0.0156	No
144	ID2	1422537_a_at 1435176_a_at 1453596_at	17499	-0.777	0.0048	No
145	ALDH4A1	1452375_at	17665	-0.842	-0.0007	No
146	ARF1	1420920_a_at 1426390_a_at	17692	-0.854	0.0002	No
147	CHUK	1417091_at 1428210_s_at 1451383_a_at	17804	-0.903	-0.0027	No
148	LIMK2	1418581_a_at 1439896_at 1452060_a_at 1458628_at	18523	-1.179	-0.0329	No
149	EXTL3	1421339_at 1434703_at	18526	-1.182	-0.0301	No
150	CALU	1415870_at 1441477_at	18954	-1.410	-0.0462	No
151	ATP6V0E	1416328_a_at	19083	-1.487	-0.0485	No
152	RBBP6	1425114_at 1425115_at 1425421_at 1426487_a_at 1453611_at	19126	-1.518	-0.0467	No
153	AATF	1432394_a_at 1439676_at 1441722_at 1447459_at	19167	-1.543	-0.0448	No
154	NXF1	1416791_a_at	19169	-1.544	-0.0411	No
155	SLC1A5	1416629_at 1440379_at	19596	-1.868	-0.0561	No
156	ATP6V0C	1416392_a_at 1435732_x_at 1438925_x_at	19624	-1.894	-0.0527	No
157	PICALM	1441328_at 1443218_at 1446968_at 1451316_a_at 1455773_at	19635	-1.899	-0.0485	No
158	XPO6	1422759_a_at 1440492_at 1443737_at	19650	-1.913	-0.0445	No
159	PTBP1	1424874_a_at 1450443_at 1458284_at	19680	-1.938	-0.0411	No
160	PA2G4	1420142_s_at 1423060_at 1435372_a_at 1450854_at 1460265_at	19726	-1.974	-0.0384	No
161	MAPKAPK3	1434815_a_at 1437494_at	19978	-2.157	-0.0447	No
162	SREBF1	1426690_a_at	20071	-2.242	-0.0434	No
163	PAPOLA	1424216_a_at 1424217_at 1427544_a_at 1444015_at 1455836_at	20184	-2.346	-0.0428	No
164	PPP2R2A	1429715_at 1437730_at 1453260_a_at	20200	-2.367	-0.0378	No
165	GORASP2	1424710_a_at 1442825_at 1460460_a_at	20233	-2.399	-0.0334	No
166	ARMET	1428112_at 1459455_at	20472	-2.689	-0.0378	No
167	TGDS	1424526_a_at	20477	-2.694	-0.0314	No
168	CCT4	1415867_at 1415868_at 1430034_at 1433447_x_at 1438560_x_at 1442569_at 1456082_x_at 1456572_x_at	20708	-3.036	-0.0345	No
169	ADRM1	1419263_a_at 1438170_x_at	20943	-3.475	-0.0368	No
170	BYSL	1422767_at 1450742_at	21422	-4.792	-0.0471	No
171	INPP5E	1423229_at 1423230_at	21502	-5.183	-0.0381	No
172	TOMM40	1426118_a_at 1459680_at	21800	-7.413	-0.0336	No
173	PSMD14	1421751_a_at 1446521_at 1457765_at 1459734_at	21905	-8.126	-0.0186	No
174	PSMC2	1426611_at 1435859_x_at 1443307_at	21908	-8.187	0.0013	No