Details for gene set HADDAD_HPCLYMPHO

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	HADDAD_HPCLYMPHO_ENRICHED
Enrichment Score (ES)	-0.48930916
Normalized Enrichment Score (NES)	-2.022978
Nominal p-value	0.0
FDR q-value	0.008452944
FWER p-Value	0.039

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	IL7R	1448575_at 1448576_at	211	5.879	0.0039	No
2	PCAF	1434037_s_at 1444473_at 1445105_at 1450821_at	261	5.432	0.0143	No
3	BLK	1422775_at	610	3.996	0.0075	No
4	SNX2	1460224_at	705	3.769	0.0119	No
5	ITPR1	1417279_at 1443492_at 1457189_at 1460203_at	739	3.680	0.0189	No
6	RHOB	1449110_at	901	3.339	0.0192	No
7	EZH2	1416544_at 1444263_at	932	3.290	0.0255	No
8	HIST1H3D	1427863_at 1453573_at	1059	3.091	0.0268	No
9	POU2AF1	1416957_at	1297	2.796	0.0224	No
10	GNG7	1455190_at	1312	2.781	0.0282	No
11	LRP2BP	1429704_at 1430684_s_at 1432039_a_at 1439821_at	1393	2.700	0.0308	No
12	GLRX	1416592_at 1416593_at	1425	2.670	0.0356	No
13	AKAP12	1419706_a_at 1458235_at	1716	2.371	0.0277	No
14	HIST1H1E	1422398_at 1440330_at 1443209_at 1445565_at	1859	2.251	0.0264	No
15	FMR1	1423369_at 1426086_a_at 1452550_a_at	1865	2.245	0.0313	No
16	PCNA	1417947_at	1885	2.232	0.0356	No
17	SOCS2	1418507_s_at 1438470_at 1441476_at 1442586_at 1446085_at 1449109_at	1916	2.210	0.0394	No
18	CEP135	1444201_at	1958	2.178	0.0425	No
19	VDAC1	1415998_at 1436992_x_at 1437192_x_at 1437452_x_at 1437947_x_at	2091	2.082	0.0413	No
20	TCF3	1436207_at 1450117_at	2124	2.060	0.0446	No
21	REXO2	1451259_at	2395	1.895	0.0366	No
22	AEBP1	1422514_at 1450637_a_at	2437	1.870	0.0390	No
23	TGIF	1422286_a_at	2490	1.843	0.0409	No
24	PDCD6	1416027_at	2538	1.818	0.0429	No
25	PPP3CC	1420743_a_at 1430025_at	2782	1.725	0.0357	No
26	P4HA2	1417149_at	2825	1.706	0.0378	No
27	NGLY1	1417827_at 1440463_at 1441833_at	2851	1.697	0.0405	No
28	CD72	1426112_a_at	2883	1.687	0.0430	No
29	GPR125	1426782_at 1431034_at 1444300_at	3130	1.594	0.0354	No
30	ANAPC5	1416906_at 1433822_x_at 1435177_a_at 1435178_x_at 1453307_a_at 1456695_x_at	3188	1.571	0.0364	No
31	CD9	1416066_at	3261	1.552	0.0367	No
32	PTPRE	1418539_a_at 1418540_a_at 1459638_at	3280	1.547	0.0395	No
33	ZBTB10	1458695_at	3406	1.507	0.0372	No
34	P2RX5	1449433_at	3523	1.468	0.0352	No
35	VPS13A	1431327_at 1440146_at 1440482_at 1456592_at 1457674_at	3602	1.445	0.0350	No
36	MME	1422975_at	3612	1.437	0.0379	No
37	UXS1	1426275_a_at 1452011_a_at	3616	1.436	0.0411	No
38	RRM2	1416120_at 1434437_x_at 1448226_at	3670	1.417	0.0420	No
39	LRMP	1448409_at	3671	1.417	0.0452	No
40	CD19	1450570_a_at	3704	1.408	0.0470	No
41	MEF2A	1421252_a_at 1425426_a_at 1427185_at 1427186_a_at 1452347_at	3764	1.390	0.0475	No
42	HIST1H4H	1428014_at 1431333_at	3914	1.354	0.0438	No
43	CCDC81	1431839_a_at	4080	1.313	0.0393	No
44	CSH2	1415835_at	4083	1.312	0.0422	No
45	SUV420H1	1434999_at 1442764_at 1451817_at 1455171_at	4127	1.303	0.0433	No
46	TOB1	1423176_at 1440844_at	4147	1.298	0.0454	No
47	PPFIBP1	1443029_at 1445577_at 1452759_s_at	4212	1.285	0.0454	No
48	NPY	1419127_at	4288	1.270	0.0449	No
49	CD79A	1418830_at	4303	1.267	0.0472	No
50	CTBP2	1422887_a_at 1439823_at	4501	1.231	0.0410	No
51	DNASE2B	1450237_at	4575	1.218	0.0404	No
52	FHIT	1425893_a_at	4609	1.211	0.0417	No
53	PLXNA1	1421232_at 1428623_at	4784	1.175	0.0364	No
54	HS3ST1	1423450_a_at	4951	1.144	0.0314	No
55	COBL	1434917_at 1442076_at	5034	1.125	0.0303	No
56	HRK	1439854_at 1450366_at	5049	1.124	0.0322	No
57	IGLL1	1420176_x_at 1420177_at	5557	1.042	0.0113	No
58	TPD52	1419493_a_at 1419494_a_at 1436008_at 1458668_at	5594	1.038	0.0121	No
59	RBM6	1417213_a_at 1440223_at 1452466_a_at 1458912_at	5712	1.021	0.0090	No
60	PPM1A	1415678_at 1417221_at 1425537_at 1429500_at 1429501_s_at 1443903_at 1451943_a_at 1453171_s_at	5823	1.006	0.0063	No
61	MS4A1	1423226_at 1450912_at	5881	1.001	0.0060	No
62	PXDN	1428259_at	6407	0.926	-0.0160	No
63	UBE2D2	1416475_at 1416476_a_at 1416477_at 1439655_at 1445885_at 1448356_at	6509	0.912	-0.0186	No
64	PKD2	1417753_at 1441870_s_at	6585	0.899	-0.0199	No
65	BLNK	1451780_at	6620	0.895	-0.0194	No
66	QRSL1	1429317_at 1456542_s_at	6624	0.895	-0.0175	No
67	EIF2AK3	1430371_x_at 1449278_at 1453505_a_at	6713	0.883	-0.0195	No
68	MPPED2	1431751_a_at 1435285_at	6886	0.857	-0.0254	No
69	SH3TC1	1427619_a_at	7077	0.830	-0.0323	No
70	PSPC1	1423192_at 1423193_at 1444748_at 1444957_at 1457723_at	7130	0.822	-0.0328	No
71	CHD7	1437745_at 1441154_at 1446621_at 1448026_at	7501	0.776	-0.0480	No
72	CAV1	1449145_a_at	7659	0.754	-0.0535	No
73	MYLK	1425504_at 1425505_at 1425506_at	8088	0.697	-0.0716	No
74	AK1	1422184_a_at 1423988_at	8120	0.692	-0.0714	No
75	NID2	1423516_a_at	8183	0.684	-0.0727	No
76	SEMA6A	1421414_a_at 1425903_at 1436458_at	8262	0.675	-0.0747	No
77	MOG	1448768_at	8354	0.663	-0.0774	No
78	SNN	1422310_at 1452789_at	8362	0.662	-0.0761	No
79	MEF2C	1421027_a_at 1421028_a_at 1424852_at 1439946_at 1445420_at 1446484_at 1451506_at 1451507_at 1458551_at	8419	0.655	-0.0772	No
80	FAIM3	1429889_at	9301	0.552	-0.1165	No
81	CORO2B	1434326_x_at 1434755_at	9355	0.544	-0.1177	No
82	DUSP26	1425848_a_at	9508	0.526	-0.1235	No
83	ELL3	1442514_a_at	9765	0.497	-0.1341	No
84	GADD45G	1453851_a_at	10515	0.417	-0.1676	No
85	VPREB3	1422921_at	10589	0.409	-0.1700	No
86	POU4F1	1429667_at 1429668_at	10594	0.409	-0.1693	No
87	FJX1	1422733_at 1450728_at 1457160_at	10732	0.392	-0.1747	No
88	ALOX5	1441962_at	11005	0.360	-0.1864	No
89	RPS11	1424000_a_at	11117	0.349	-0.1907	No
90	SOD2	1417193_at 1417194_at 1442994_at 1444531_at 1448610_a_at 1454976_at	11182	0.342	-0.1928	No
91	PLXNA2	1429772_at 1446420_at 1451753_at 1453286_at 1455037_at 1458102_at 1459033_at	11195	0.340	-0.1926	No
92	BARD1	1420594_at	11209	0.338	-0.1924	No
93	BANK1	1442646_at 1456328_at	11261	0.332	-0.1940	No
94	TMEM118	1435623_at	11335	0.324	-0.1966	No
95	SCN3A	1421705_at 1439204_at	11341	0.323	-0.1961	No
96	SCHIP1	1423025_a_at 1437700_at 1446421_at 1458588_at	11542	0.301	-0.2046	No
97	PHF15	1430081_at 1455345_at	11803	0.271	-0.2159	No
98	DCP2	1430150_at 1455070_at	11976	0.253	-0.2233	No
99	ALDH5A1	1453065_at	12076	0.243	-0.2273	No
100	COL5A1	1416740_at 1416741_at 1434479_at	12460	0.203	-0.2444	No
101	CIITA	1421210_at 1421211_a_at 1447075_at	12623	0.185	-0.2515	No
102	TCF4	1416723_at 1416724_x_at 1416725_at 1424089_a_at 1434148_at 1434149_at 1439336_at 1440106_at 1446386_at 1458201_at	12725	0.173	-0.2557	No
103	PKN2	1437295_at 1437296_at	12817	0.163	-0.2595	No
104	TOP2A	1427724_at 1442454_at 1454694_a_at	12942	0.148	-0.2649	No
105	DDR1	1415797_at 1415798_at 1435820_x_at 1437619_x_at 1438367_x_at 1439382_x_at 1456226_x_at 1459990_at	13074	0.132	-0.2706	No
106	WFS1	1448411_at	13191	0.118	-0.2757	No
107	JUN	1417409_at 1448694_at	13265	0.110	-0.2788	No
108	DBN1	1426024_a_at 1451734_a_at	13376	0.096	-0.2837	No
109	HPS4	1448629_at	13393	0.095	-0.2842	No
110	APRIN	1435242_at 1436161_at 1441553_at	13456	0.087	-0.2868	No
111	EFNB2	1419638_at 1419639_at 1440069_at 1449548_at 1449549_at	13470	0.085	-0.2872	No
112	CITED2	1417129_a_at 1421267_a_at 1439915_at 1440091_at 1443561_at 1443926_at 1445638_at 1446176_at 1447861_x_at 1457632_s_at 1459301_at	13510	0.080	-0.2888	No
113	EFHC1	1453159_at	13643	0.062	-0.2948	No
114	MSX1	1417127_at 1448601_s_at	13774	0.044	-0.3007	No
115	ATR	1427197_at 1438921_at 1445091_at	13947	0.022	-0.3085	No
116	RCBTB1	1430213_at 1456433_at	13962	0.020	-0.3091	No
117	ENTPD4	1431761_at 1438177_x_at 1447900_x_at 1449190_a_at	13975	0.018	-0.3096	No
118	ZFYVE16	1447947_at	14045	0.009	-0.3128	No
119	ARHGEF7	1424482_at 1449066_a_at	14084	0.004	-0.3145	No
120	TMCC1	1437776_at 1440384_at 1455353_at	14199	-0.014	-0.3198	No
121	TAF9B	1434960_at 1447829_x_at	14248	-0.021	-0.3219	No
122	PTPRK	1423277_at 1423278_at 1431680_a_at 1441276_at 1441277_s_at 1441644_at 1443491_at 1443699_at 1444763_at	14337	-0.034	-0.3259	No
123	PCDH9	1439322_at 1442659_at 1444215_at 1444724_at 1445052_at 1445061_at 1457973_at	14569	-0.070	-0.3364	No
124	IL1A	1421473_at	14640	-0.081	-0.3394	No
125	MAG	1460219_at	14655	-0.083	-0.3399	No
126	LRIG1	1419928_at 1434210_s_at 1441375_at 1449893_a_at 1458823_at	14673	-0.085	-0.3404	No
127	RPL35A	1417317_s_at	14681	-0.086	-0.3406	No
128	TRIB2	1426640_s_at 1426641_at 1459852_x_at	14691	-0.088	-0.3408	No
129	CD24	1416034_at 1437502_x_at 1448182_a_at	14737	-0.094	-0.3426	No
130	ATM	1421205_at 1428830_at	15042	-0.145	-0.3563	No
131	KCNJ2	1450503_at	15043	-0.145	-0.3560	No
132	EFHA1	1454808_at	15603	-0.241	-0.3812	No
133	RB1CC1	1418968_at 1431605_at 1449292_at	15773	-0.276	-0.3883	No
134	STAG3	1460229_at	15884	-0.298	-0.3927	No
135	TOP2B	1416731_at 1416732_at 1448458_at 1456688_at	15901	-0.301	-0.3927	No
136	TSPAN14	1423924_s_at	16159	-0.359	-0.4037	No
137	SIAH2	1448170_at 1448171_at	16231	-0.376	-0.4061	No
138	IRF4	1421173_at 1421174_at	16277	-0.392	-0.4073	No
139	TCL1A	1422458_at	16455	-0.434	-0.4144	No
140	IRF2	1418265_s_at 1447527_at	16673	-0.489	-0.4233	No
141	HIP1R	1425551_at 1425552_at 1425553_s_at 1444832_at	16752	-0.516	-0.4257	No
142	GPM6B	1423091_a_at 1425942_a_at 1453514_at	17102	-0.625	-0.4403	No
143	TIA1	1416812_at 1416813_at 1416814_at 1423763_x_at 1431708_a_at 1437934_at 1441834_x_at 1453803_at 1454778_x_at	17153	-0.647	-0.4411	No
144	ANKRD10	1416065_a_at 1429304_at 1429305_at 1440170_at 1447832_x_at 1448199_at	17248	-0.679	-0.4439	No
145	NELF	1436959_x_at 1439398_x_at 1442706_at 1449474_a_at	17362	-0.721	-0.4474	No
146	SNTB2	1420371_at 1420372_at 1436986_at 1449840_at	17399	-0.736	-0.4473	No
147	TLE1	1422751_at 1434033_at	17401	-0.737	-0.4457	No
148	CALM1	1417365_a_at 1417366_s_at 1433592_at 1454611_a_at 1455571_x_at	17505	-0.779	-0.4486	No
149	CYFIP2	1428347_at 1442167_at 1444351_at 1449273_at	17525	-0.787	-0.4477	No
150	JMJD1C	1426900_at 1439998_at 1441592_at 1448049_at 1458521_at	17549	-0.798	-0.4469	No
151	TLE4	1425650_at 1430384_at 1450853_at	17552	-0.800	-0.4451	No
152	KIF13A	1439532_s_at 1440578_at 1442252_at 1446026_at 1447853_x_at 1451890_at 1455746_at	17703	-0.860	-0.4500	No
153	MAP4K4	1422615_at 1440609_at 1448050_s_at 1459912_at	17705	-0.864	-0.4481	No
154	CENTD1	1436895_at 1446649_at 1452291_at 1456337_at 1458173_at	17936	-0.959	-0.4564	No
155	USP34	1434392_at 1434393_at 1444437_at 1446112_at 1460126_at	17953	-0.964	-0.4550	No
156	E2F5	1417444_at 1447625_at 1460207_s_at	17963	-0.968	-0.4531	No
157	PCBP2	1421743_a_at 1435881_at	18133	-1.020	-0.4585	No
158	ARID5B	1420972_at 1420973_at 1434283_at 1442176_at 1445423_at 1456831_at 1456973_at 1457483_at 1458238_at	18154	-1.025	-0.4571	No
159	FOXP1	1421140_a_at 1421141_a_at 1421142_s_at 1435222_at 1438802_at 1443258_at 1446280_at 1447209_at 1455242_at 1456851_at	18249	-1.059	-0.4590	No
160	RIMS3	1435971_at 1459042_at	18401	-1.121	-0.4633	No
161	HIST1H1C	1416101_a_at 1436994_a_at 1438204_at	18453	-1.146	-0.4630	No
162	CDC2L5	1440833_at 1452897_at 1458313_at	18469	-1.155	-0.4610	No
163	RB1	1417850_at 1441494_at 1444400_at 1444454_at 1457447_at	18569	-1.202	-0.4628	No
164	MDM1	1445709_at 1451053_a_at	18879	-1.364	-0.4739	No
165	P2RY14	1424733_at	18894	-1.372	-0.4713	No
166	AUTS2	1427293_a_at 1438680_at 1441869_x_at 1442360_at 1443062_at 1443070_at 1443770_x_at 1444069_at 1445307_at 1445469_at 1445538_at 1446849_at 1452379_at 1457139_at 1458592_at 1459338_at	18942	-1.400	-0.4702	No
167	RASGRP1	1421176_at 1431749_a_at 1434295_at 1450143_at	19048	-1.462	-0.4717	No
168	EIF1AY	1419736_a_at 1437071_at 1449576_at	19124	-1.516	-0.4716	No
169	PLEKHF2	1423861_at 1423862_at	19464	-1.743	-0.4832	No
170	JARID1D	1424903_at 1452562_at 1452563_a_at	19476	-1.756	-0.4796	No
171	ELK3	1417662_at 1442986_at 1445886_at 1448797_at	19687	-1.943	-0.4848	Yes
172	FOXO1A	1416981_at 1416982_at 1416983_s_at 1459170_at	19785	-2.010	-0.4846	Yes
173	BACH2	1421343_at 1437667_a_at 1439468_at 1440304_at 1441657_at 1442605_at 1443263_at 1446929_at 1458730_at 1459136_at	19806	-2.026	-0.4808	Yes
174	CRIM1	1426951_at 1442548_at 1452253_at 1458497_at 1459632_at	19853	-2.051	-0.4782	Yes
175	VIL2	1450850_at 1456725_x_at	19854	-2.052	-0.4734	Yes
176	DYRK2	1428637_at 1436918_at 1456502_at 1457667_x_at	19960	-2.139	-0.4733	Yes
177	MLXIP	1426979_at	20094	-2.256	-0.4742	Yes
178	CXCR4	1448710_at	20095	-2.256	-0.4690	Yes
179	VPREB1	1449869_at	20135	-2.302	-0.4654	Yes
180	ABCG2	1422906_at	20239	-2.403	-0.4646	Yes
181	DCK	1428838_a_at 1439012_a_at 1449176_a_at	20266	-2.433	-0.4602	Yes
182	PRDM2	1429251_at 1444123_at 1453068_at	20302	-2.476	-0.4560	Yes
183	ING1	1416860_s_at 1433267_at 1448496_a_at 1454534_at	20323	-2.498	-0.4512	Yes
184	LEF1	1421299_a_at 1436398_at 1440760_at	20367	-2.555	-0.4472	Yes
185	DDX3Y	1426438_at 1426439_at 1452077_at	20370	-2.560	-0.4414	Yes
186	SH2D3C	1415886_at	20414	-2.617	-0.4373	Yes
187	AP1B1	1416279_at	20430	-2.638	-0.4319	Yes
188	DNAJB14	1430561_at	20518	-2.763	-0.4295	Yes
189	IRS2	1443969_at	20670	-2.975	-0.4295	Yes
190	ZFP36L1	1422528_a_at 1450644_at	20819	-3.233	-0.4288	Yes
191	ZHX2	1455210_at	20896	-3.382	-0.4245	Yes
192	DACT1	1417937_at	21051	-3.697	-0.4230	Yes
193	RAD52	1416602_a_at 1426296_at	21108	-3.817	-0.4168	Yes
194	PPM1B	1425330_a_at 1426382_at 1441479_at 1451669_at	21112	-3.829	-0.4080	Yes
195	SEC22B	1415766_at 1449063_at	21125	-3.858	-0.3996	Yes
196	TTC13	1437709_x_at 1438631_x_at 1451351_at	21156	-3.913	-0.3919	Yes
197	NEIL1	1452871_at	21182	-3.982	-0.3838	Yes
198	LAPTM5	1426025_s_at 1436905_x_at 1447742_at 1459841_x_at	21200	-4.038	-0.3753	Yes
199	RAG2	1418065_at	21206	-4.047	-0.3661	Yes
200	CACNB3	1448656_at	21292	-4.298	-0.3601	Yes
201	SMARCA4	1426804_at 1426805_at	21310	-4.373	-0.3507	Yes
202	TNFRSF7	1452389_at	21352	-4.570	-0.3420	Yes
203	CAPN3	1426043_a_at 1433681_x_at	21358	-4.587	-0.3316	Yes
204	TUBA1	1418884_x_at	21444	-4.879	-0.3242	Yes
205	CD69	1428735_at	21459	-4.949	-0.3134	Yes
206	PIK3CD	1422991_at 1422992_s_at 1443798_at 1453281_at 1458321_at	21476	-5.037	-0.3024	Yes
207	ISG20	1419569_a_at	21489	-5.107	-0.2911	Yes
208	DNTT	1420166_at 1449757_x_at 1450545_a_at	21539	-5.348	-0.2810	Yes
209	CD79B	1417640_at	21546	-5.396	-0.2688	Yes
210	SMAD1	1416081_at 1448208_at 1459843_s_at	21583	-5.667	-0.2573	Yes
211	EDEM1	1424065_at 1451218_at	21608	-5.834	-0.2449	Yes
212	BTG1	1426083_a_at 1437455_a_at	21672	-6.290	-0.2332	Yes
213	WSB2	1421846_at 1421847_at 1438129_at	21676	-6.323	-0.2187	Yes
214	ID3	1416630_at	21719	-6.663	-0.2051	Yes
215	SSBP2	1429951_at 1438423_at 1449815_a_at 1451542_at	21731	-6.802	-0.1899	Yes
216	SLC35D1	1433595_at 1445629_at	21791	-7.338	-0.1756	Yes
217	PIAS1	1422581_at 1446448_at 1455486_at 1455611_at	21804	-7.438	-0.1589	Yes
218	IGF2R	1424111_at 1424112_at 1440979_at 1445966_at 1457356_at	21809	-7.455	-0.1418	Yes
219	STK38	1416252_at 1431303_at 1439938_at	21845	-7.794	-0.1253	Yes
220	CDKN1B	1419497_at 1434045_at	21856	-7.819	-0.1077	Yes
221	CDKN2C	1416868_at 1439164_at	21857	-7.825	-0.0895	Yes
222	MGAT5	1425744_a_at 1428643_at 1428644_at 1443444_at	21869	-7.858	-0.0718	Yes
223	VAMP1	1421862_a_at 1421863_at	21870	-7.859	-0.0536	Yes
224	BTG2	1416250_at 1448272_at	21874	-7.879	-0.0354	Yes
225	ELF2	1418275_a_at 1418276_at 1428045_a_at 1444574_at	21881	-7.921	-0.0174	Yes
226	RAG1	1440574_at 1450680_at	21931	-8.556	0.0002	Yes