Details for gene set CHEN_HOXA5_TARGETS

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	CHEN_HOXA5_TARGETS_UP
Enrichment Score (ES)	-0.49752614
Normalized Enrichment Score (NES)	-1.9733962
Nominal p-value	0.0
FDR q-value	0.017147534
FWER p-Value	0.089

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CEBPB	1418901_at 1427844_a_at	98	7.620	0.0213	No
2	CEBPG	1425261_at 1425262_at 1451639_at	395	4.769	0.0239	No
3	ASNS	1433966_x_at 1451095_at	406	4.724	0.0394	No
4	FEM1C	1428890_at 1438075_at	745	3.667	0.0363	No
5	NFIL3	1418932_at	1135	2.978	0.0285	No
6	SNX5	1417646_a_at 1417647_at 1417648_s_at 1437074_at 1448791_at	1279	2.818	0.0315	No
7	TAF2	1434238_at 1457351_at	1913	2.211	0.0099	No
8	TNFRSF10B	1421296_at 1422344_s_at	2095	2.079	0.0087	No
9	ATF3	1449363_at	2127	2.059	0.0142	No
10	ING3	1422805_a_at 1422806_x_at 1450760_a_at 1460082_at	2337	1.930	0.0111	No
11	CHAC1	1451382_at	2347	1.925	0.0172	No
12	RABGGTB	1419553_a_at	2457	1.863	0.0186	No
13	GAD1	1416561_at 1416562_at	2571	1.799	0.0195	No
14	CENPC1	1420441_at	2610	1.785	0.0238	No
15	RYBP	1421111_at	2647	1.771	0.0281	No
16	CTH	1426243_at	2857	1.696	0.0242	No
17	PELI1	1417371_at 1417372_a_at 1431060_at 1431061_s_at 1444017_at 1459272_at	2948	1.664	0.0258	No
18	TRPC1	1421095_a_at 1421096_at	2954	1.662	0.0312	No
19	ZCCHC10	1418820_s_at	3232	1.557	0.0237	No
20	EIF5	1415723_at 1433631_at 1454663_at 1454664_a_at 1456256_at	3477	1.481	0.0175	No
21	NOC3L	1426286_at	3805	1.379	0.0072	No
22	CASP3	1426165_a_at 1430192_at 1449839_at	3970	1.341	0.0042	No
23	DAAM1	1431035_at 1455244_at 1458662_at	4096	1.309	0.0029	No
24	SUV420H1	1434999_at 1442764_at 1451817_at 1455171_at	4127	1.303	0.0059	No
25	HLX1	1418939_at	4451	1.238	-0.0047	No
26	ARIH1	1427188_at 1427189_at 1436498_at 1441022_at 1459397_at 1460090_at	4566	1.219	-0.0058	No
27	CREB5	1440089_at 1442576_at 1457222_at	4768	1.177	-0.0111	No
28	SCG5	1423150_at 1446755_at	4773	1.177	-0.0073	No
29	NFKBIE	1431843_a_at 1458299_s_at	5438	1.058	-0.0342	No
30	DUSP8	1418714_at	5804	1.009	-0.0476	No
31	PTPN2	1417140_a_at 1425197_at 1425198_at 1438562_a_at	5875	1.001	-0.0474	No
32	CDK7	1424257_at 1439511_at 1451741_a_at 1458987_at	6028	0.983	-0.0510	No
33	TSC22D1	1425742_a_at 1433899_x_at 1447360_at 1454758_a_at 1454971_x_at 1456132_x_at	6298	0.942	-0.0602	No
34	SFPQ	1423795_at 1423796_at 1436898_at 1438458_a_at 1438459_x_at 1439058_at	6320	0.940	-0.0580	No
35	BDKRB1	1450586_at	6436	0.922	-0.0601	No
36	SFRS12	1427134_at 1427135_at 1427136_s_at 1458056_at	6732	0.880	-0.0707	No
37	PCTK2	1435143_at 1446130_at 1446272_at	6858	0.859	-0.0735	No
38	INTS6	1423274_at 1423275_at 1436089_at 1443128_at	6862	0.859	-0.0708	No
39	PSPC1	1423192_at 1423193_at 1444748_at 1444957_at 1457723_at	7130	0.822	-0.0802	No
40	CARF	1425313_at	7710	0.749	-0.1043	No
41	GADD45B	1420197_at 1449773_s_at 1450971_at	7784	0.739	-0.1052	No
42	CARS	1427330_at 1452394_at	8154	0.688	-0.1198	No
43	PRKRIP1	1417425_at 1442084_at 1442598_at	8336	0.665	-0.1258	No
44	FOSB	1422134_at	8652	0.626	-0.1382	No
45	NUPL1	1424389_at 1424390_at 1429878_a_at	8786	0.611	-0.1422	No
46	CHD9	1435688_at 1441339_at 1457672_at 1458078_at 1459450_at	8849	0.604	-0.1430	No
47	ZZZ3	1434332_at 1438487_s_at 1441748_at	9494	0.528	-0.1708	No
48	STC2	1419503_at 1445186_at 1449484_at	9736	0.500	-0.1802	No
49	SNAI2	1418673_at 1447643_x_at	10015	0.468	-0.1914	No
50	NEK1	1434267_at 1438592_at 1453612_at 1458211_at	10266	0.442	-0.2014	No
51	RIC8B	1435096_at 1439724_at	10580	0.411	-0.2143	No
52	SOX30	1440509_at	10670	0.400	-0.2171	No
53	PTN	1416211_a_at 1443173_at 1443809_at 1448254_at	10939	0.367	-0.2281	No
54	DSCR1	1416600_a_at 1416601_a_at	11307	0.328	-0.2439	No
55	RIPK2	1421236_at 1450173_at	11319	0.326	-0.2433	No
56	HRH1	1419210_at 1438494_at	11417	0.314	-0.2467	No
57	TPTE	1427690_a_at	11545	0.300	-0.2515	No
58	DMTF1	1422636_at 1440349_at 1456697_x_at	12052	0.246	-0.2739	No
59	NSUN6	1427491_at 1432012_a_at	12344	0.216	-0.2866	No
60	DLX2	1448877_at	12359	0.214	-0.2865	No
61	SDCCAG1	1425697_at 1429327_at 1429446_at 1435020_at	12382	0.212	-0.2868	No
62	KIN	1427317_at	12463	0.203	-0.2897	No
63	ZCCHC6	1433910_at 1441986_at 1448037_at	12951	0.147	-0.3116	No
64	PMAIP1	1418203_at	13081	0.131	-0.3171	No
65	PPP1R12A	1429487_at 1437734_at 1437735_at 1444762_at 1444834_at 1453163_at	13142	0.124	-0.3194	No
66	JUN	1417409_at 1448694_at	13265	0.110	-0.3247	No
67	TMEFF1	1426649_at 1441890_x_at	13347	0.099	-0.3281	No
68	PTGS2	1417262_at 1417263_at	13435	0.089	-0.3317	No
69	PPWD1	1456359_at	13666	0.058	-0.3421	No
70	LIF	1421206_at 1421207_at 1450160_at	14043	0.009	-0.3594	No
71	CEP76	1437209_at 1437254_at	14193	-0.013	-0.3662	No
72	SPATA5L1	1455863_at	14323	-0.032	-0.3720	No
73	AGTPBP1	1429933_at 1432385_a_at	14558	-0.068	-0.3825	No
74	TBX3	1437479_x_at 1439567_at 1444594_at 1445757_at 1448029_at	14670	-0.085	-0.3873	No
75	ARID4B	1431024_a_at 1431031_at 1435768_at 1446317_at 1451847_s_at 1460384_a_at	14732	-0.094	-0.3898	No
76	POLR3F	1429686_at 1430328_at 1431999_at 1439075_at 1451773_s_at	14953	-0.129	-0.3995	No
77	SETDB1	1416670_at 1420974_at 1451833_a_at 1458215_at	15004	-0.138	-0.4013	No
78	F3	1417408_at	15034	-0.143	-0.4021	No
79	FOSL2	1422931_at	15047	-0.146	-0.4022	No
80	GPATC2	1420528_at 1440329_s_at 1445189_at 1452498_at 1458566_at	15195	-0.169	-0.4084	No
81	SCYL3	1428918_at 1446655_at 1452960_at	15207	-0.171	-0.4083	No
82	ZNF35	1460252_s_at	15270	-0.181	-0.4105	No
83	SEC24A	1433934_at 1438121_at	15456	-0.213	-0.4183	No
84	TLK2	1416944_a_at 1431827_a_at 1454018_at 1457357_at	15509	-0.222	-0.4199	No
85	JOSD3	1430147_a_at 1430271_x_at 1436558_at 1442289_at 1452635_x_at 1452987_at 1457292_at	15669	-0.253	-0.4264	No
86	AKAP10	1421121_at 1428482_at 1441829_s_at 1447570_s_at	15948	-0.312	-0.4381	No
87	ZRF1	1417657_s_at 1425910_at 1448794_s_at 1454219_at	16193	-0.368	-0.4481	No
88	SEC31A	1453014_a_at	16234	-0.377	-0.4486	No
89	RBM5	1438069_a_at 1441319_at 1444618_at 1444971_at 1452186_at 1452187_at 1456262_at	16236	-0.378	-0.4474	No
90	CNOT4	1420999_at 1421000_at 1436645_a_at 1437586_at 1443169_at 1450083_at 1459449_at	16258	-0.384	-0.4471	No
91	KLF6	1418280_at 1427742_a_at 1433508_at 1447448_s_at 1459718_x_at	16764	-0.519	-0.4685	No
92	SNX16	1424276_at 1438803_s_at 1456041_at	16808	-0.532	-0.4687	No
93	PPIG	1434475_at 1435341_at 1436505_at	16955	-0.581	-0.4734	No
94	KLF5	1430255_at 1451021_a_at 1451739_at	17065	-0.615	-0.4763	No
95	GEM	1426063_a_at	17077	-0.617	-0.4747	No
96	TAF1A	1419702_at	17238	-0.676	-0.4798	No
97	DCLRE1C	1457679_at 1458361_at	17293	-0.692	-0.4799	No
98	TANK	1421640_a_at 1441513_at 1459668_at	17455	-0.760	-0.4848	No
99	SMCHD1	1428251_at 1442497_at	17473	-0.767	-0.4829	No
100	JMJD1C	1426900_at 1439998_at 1441592_at 1448049_at 1458521_at	17549	-0.798	-0.4837	No
101	WDR67	1434241_at 1442286_at 1444689_at 1458158_at	17714	-0.866	-0.4883	No
102	PTBP2	1423470_at 1423471_at 1444746_at 1446490_at 1458757_at	17854	-0.931	-0.4915	No
103	RBM15	1434514_at	17885	-0.942	-0.4897	No
104	IHPK2	1428373_at 1435319_at	18009	-0.985	-0.4920	Yes
105	KLF10	1416029_at	18018	-0.988	-0.4890	Yes
106	FOXO3A	1434831_a_at 1434832_at 1439598_at 1444226_at 1450236_at 1458279_at	18027	-0.992	-0.4860	Yes
107	PRPF38B	1428674_at 1452869_at 1455016_at 1456506_at	18062	-1.002	-0.4842	Yes
108	TSC22D2	1430535_at 1453012_at	18069	-1.004	-0.4811	Yes
109	NFKBIA	1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at	18087	-1.008	-0.4785	Yes
110	RBM39	1420982_at 1426671_a_at 1438397_a_at 1438398_at 1438420_at 1439316_at 1456386_at	18145	-1.023	-0.4776	Yes
111	CREM	1418322_at 1430598_at 1430847_a_at 1449037_at	18158	-1.026	-0.4747	Yes
112	DPP8	1428697_at 1431064_at 1445705_x_at	18222	-1.049	-0.4740	Yes
113	MARCH7	1420609_at 1436893_a_at 1440966_at 1443329_at 1458690_at	18264	-1.064	-0.4723	Yes
114	CCNT2	1427088_at 1427089_at 1435445_at 1452297_at 1453399_at 1457439_at	18540	-1.190	-0.4809	Yes
115	ETS2	1416268_at 1437809_x_at 1447685_x_at	18581	-1.205	-0.4787	Yes
116	ZNF3	1420675_at	18593	-1.212	-0.4751	Yes
117	FBXO38	1452255_at	18778	-1.312	-0.4791	Yes
118	THUMPD2	1428726_at	18991	-1.426	-0.4840	Yes
119	RBBP6	1425114_at 1425115_at 1425421_at 1426487_a_at 1453611_at	19126	-1.518	-0.4850	Yes
120	MCL1	1416880_at 1416881_at 1437527_x_at 1448503_at 1456243_x_at 1456381_x_at	19400	-1.704	-0.4918	Yes
121	TBK1	1422469_at 1445571_at 1460315_s_at	19445	-1.737	-0.4879	Yes
122	RCHY1	1432144_a_at	19463	-1.743	-0.4828	Yes
123	SAT1	1420502_at	19652	-1.916	-0.4849	Yes
124	ADNP	1423069_at	19729	-1.976	-0.4817	Yes
125	BCL10	1418970_a_at 1418971_x_at 1418972_at 1443524_x_at	19756	-1.997	-0.4761	Yes
126	CCNL1	1423622_a_at 1437383_at	19764	-2.000	-0.4697	Yes
127	WAC	1437426_at 1439249_at 1444241_at 1451494_at 1451495_at 1457559_at 1458471_at	19866	-2.062	-0.4673	Yes
128	ZCCHC8	1423755_at 1441639_at	19867	-2.062	-0.4604	Yes
129	NEDD9	1422818_at 1437132_x_at 1447885_x_at 1450767_at	19885	-2.073	-0.4541	Yes
130	CNOT2	1436980_x_at 1445017_at 1447212_at 1454602_s_at 1454603_a_at 1456576_x_at	20097	-2.257	-0.4562	Yes
131	CAB39	1418432_at 1418433_at	20155	-2.318	-0.4509	Yes
132	IFRD1	1416067_at 1442014_at	20170	-2.329	-0.4437	Yes
133	MAFF	1418936_at	20411	-2.616	-0.4458	Yes
134	TUFT1	1416689_at 1444694_at	20546	-2.804	-0.4425	Yes
135	CLK4	1422886_a_at 1427663_a_at	20617	-2.895	-0.4359	Yes
136	TIPARP	1426721_s_at 1452160_at 1452161_at	20703	-3.031	-0.4295	Yes
137	KIF18A	1424107_at 1457895_at	20827	-3.244	-0.4242	Yes
138	FNBP4	1423191_at 1438700_at	20920	-3.430	-0.4168	Yes
139	SLTM	1424452_at 1429624_at 1443426_at 1445720_at 1456683_at	20947	-3.485	-0.4062	Yes
140	FOS	1423100_at	20955	-3.496	-0.3947	Yes
141	CLK1	1426124_a_at	20975	-3.529	-0.3836	Yes
142	RLF	1427171_at 1439555_at 1440020_at 1446057_at 1447164_at	21000	-3.586	-0.3726	Yes
143	TNFRSF9	1421481_at 1428034_a_at 1460469_at	21014	-3.623	-0.3609	Yes
144	MARK3	1418316_a_at	21029	-3.654	-0.3491	Yes
145	STRN3	1423535_at 1423536_at 1441050_at 1441266_at 1457343_at	21057	-3.699	-0.3378	Yes
146	IRF7	1417244_a_at	21060	-3.701	-0.3254	Yes
147	BIRC2	1418854_at	21087	-3.757	-0.3139	Yes
148	MORC3	1420091_s_at 1420092_at 1452224_at	21099	-3.797	-0.3015	Yes
149	IER2	1416442_at	21128	-3.863	-0.2897	Yes
150	JMJD1A	1426810_at	21153	-3.908	-0.2776	Yes
151	TNFAIP3	1433699_at 1450829_at	21180	-3.976	-0.2653	Yes
152	BACH1	1440831_at 1449311_at	21191	-4.005	-0.2522	Yes
153	DUSP5	1437199_at	21194	-4.012	-0.2387	Yes
154	RNF111	1423304_a_at	21244	-4.157	-0.2269	Yes
155	DUSP6	1415834_at	21252	-4.176	-0.2130	Yes
156	RELB	1417856_at	21351	-4.570	-0.2021	Yes
157	SUHW4	1426556_at 1457455_at	21375	-4.652	-0.1874	Yes
158	PRPF3	1424314_at 1457390_at	21380	-4.659	-0.1718	Yes
159	JUNB	1415899_at	21503	-5.184	-0.1598	Yes
160	LIG4	1439487_at	21518	-5.251	-0.1427	Yes
161	ARNTL	1425099_a_at 1446544_at 1457740_at	21555	-5.483	-0.1257	Yes
162	CRY1	1433733_a_at	21580	-5.660	-0.1077	Yes
163	VEGF	1420909_at 1451959_a_at	21679	-6.362	-0.0906	Yes
164	NCOA3	1422737_at 1457214_at 1458039_at	21705	-6.564	-0.0695	Yes
165	PGS1	1430429_at 1440367_at 1454045_a_at 1454046_x_at 1455229_x_at	21855	-7.819	-0.0499	Yes
166	EGR1	1417065_at	21860	-7.832	-0.0235	Yes
167	BIRC3	1421392_a_at 1425223_at	21886	-7.963	0.0023	Yes