Details for gene set REACTOME_DNA

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	REACTOME_DNA_REPLICATION
Enrichment Score (ES)	0.6705028
Normalized Enrichment Score (NES)	2.325897
Nominal p-value	0.0
FDR q-value	0.0
FWER p-Value	0.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	POLA2	1425794_at 1448369_at 1456713_at	39	8.968	0.0426	Yes
2	PRIM1	1418369_at 1444544_at 1449061_a_at	62	8.664	0.0845	Yes
3	RFC3	1423700_at 1432538_a_at	206	5.897	0.1071	Yes
4	MCM6	1416251_at 1438852_x_at 1447756_x_at	213	5.833	0.1357	Yes
5	RFC4	1424321_at 1438161_s_at	219	5.766	0.1640	Yes
6	MCM4	1416214_at 1436708_x_at	225	5.728	0.1922	Yes
7	PSMD12	1448492_a_at	264	5.409	0.2172	Yes
8	PSMA4	1460339_at	318	5.099	0.2400	Yes
9	GMNN	1417506_at	412	4.710	0.2591	Yes
10	MCM5	1415945_at 1436808_x_at	560	4.167	0.2730	Yes
11	LIG1	1416641_at	606	4.015	0.2908	Yes
12	PSMD7	1432820_at 1451056_at 1454368_at	729	3.702	0.3035	Yes
13	PSMA2	1448206_at	744	3.668	0.3211	Yes
14	PSMB3	1417052_at	747	3.666	0.3391	Yes
15	PSMB10	1448632_at	773	3.615	0.3559	Yes
16	RPA2	1416433_at 1454011_a_at	818	3.519	0.3713	Yes
17	RFC5	1452917_at	835	3.489	0.3878	Yes
18	PSMC6	1417771_a_at	882	3.386	0.4025	Yes
19	PSMA7	1423567_a_at 1423568_at	891	3.367	0.4188	Yes
20	FEN1	1421731_a_at 1436454_x_at	893	3.364	0.4354	Yes
21	PSMA5	1424681_a_at 1434356_a_at	919	3.308	0.4506	Yes
22	POLD1	1448187_at 1456055_x_at	1064	3.085	0.4593	Yes
23	PSMD9	1423386_at 1423387_at 1444321_at 1447670_at	1161	2.949	0.4695	Yes
24	PSMC4	1416290_a_at 1416291_at	1172	2.934	0.4836	Yes
25	PSMB9	1450696_at	1201	2.903	0.4966	Yes
26	POLE2	1427094_at 1431440_at	1207	2.896	0.5107	Yes
27	POLD2	1448277_at	1304	2.789	0.5202	Yes
28	PSMB6	1448822_at	1328	2.765	0.5328	Yes
29	PSMC3	1416282_at	1398	2.695	0.5430	Yes
30	PSMC1	1416005_at	1516	2.575	0.5504	Yes
31	PSMD6	1423696_a_at 1423697_at	1546	2.546	0.5617	Yes
32	PSMB1	1420052_x_at 1420053_at 1448166_a_at	1566	2.522	0.5733	Yes
33	PSMC5	1415740_at	1578	2.503	0.5852	Yes
34	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	1610	2.476	0.5960	Yes
35	PSME3	1418078_at 1418079_at 1438509_at	1682	2.402	0.6046	Yes
36	PSMD5	1423234_at	1799	2.309	0.6108	Yes
37	PSMD8	1423296_at	1817	2.287	0.6213	Yes
38	PSMA3	1448442_a_at	1853	2.256	0.6309	Yes
39	PCNA	1417947_at	1885	2.232	0.6405	Yes
40	PSMB5	1415676_a_at	1978	2.164	0.6470	Yes
41	MCM10	1433407_at 1433408_a_at 1454244_at	2208	2.002	0.6464	Yes
42	PSMD3	1448479_at	2249	1.983	0.6544	Yes
43	POLD3	1426838_at 1426839_at 1443733_x_at 1459647_at	2280	1.965	0.6628	Yes
44	MCM2	1434079_s_at 1448777_at	2322	1.939	0.6705	Yes
45	ORC1L	1422663_at 1443172_at	2636	1.774	0.6650	No
46	PSMA1	1415695_at 1436769_at 1436770_x_at 1458292_at	2780	1.726	0.6670	No
47	PSMB4	1438984_x_at 1451205_at	3848	1.368	0.6249	No
48	RPA1	1423293_at 1437309_a_at 1441240_at	4687	1.195	0.5925	No
49	E2F2	1455790_at 1458574_at	5492	1.050	0.5610	No
50	ORC4L	1423336_at 1423337_at 1431172_at 1453804_a_at	5765	1.014	0.5535	No
51	POLE	1441854_at 1448650_a_at	5885	1.000	0.5531	No
52	PSMA6	1416506_at 1435316_at 1435317_x_at 1437144_x_at	6574	0.902	0.5260	No
53	ORC5L	1415830_at 1441601_at	7063	0.831	0.5078	No
54	POLA1	1419397_at 1456285_at 1459319_at 1459963_at	7331	0.795	0.4996	No
55	CDC7	1426002_a_at 1426021_a_at	8225	0.679	0.4621	No
56	PSME1	1417056_at	8994	0.587	0.4299	No
57	PSMD2	1415831_at	9652	0.509	0.4023	No
58	CDK2	1416873_a_at 1447617_at	15987	-0.320	0.1143	No
59	RFC2	1417503_at 1457638_x_at 1457669_x_at	16192	-0.368	0.1067	No
60	PSMD11	1429370_a_at 1432726_at 1456059_at 1456104_at	16256	-0.383	0.1058	No
61	ORC2L	1418225_at 1418226_at 1418227_at	16379	-0.415	0.1022	No
62	RFC1	1418342_at 1449050_at 1451920_a_at	16812	-0.533	0.0851	No
63	PSMD10	1436559_a_at	17470	-0.766	0.0589	No
64	RB1	1417850_at 1441494_at 1444400_at 1444454_at 1457447_at	18569	-1.202	0.0146	No
65	CDC45L	1416575_at 1457838_at	18583	-1.205	0.0200	No
66	PSMB2	1444377_at 1448262_at 1459641_at	18820	-1.334	0.0158	No
67	PSMD4	1418874_a_at 1425859_a_at 1451725_a_at	19036	-1.455	0.0131	No
68	RPA3	1448938_at	19181	-1.555	0.0143	No
69	MCM3	1420029_at 1426653_at	21664	-6.234	-0.0684	No
70	PSMD14	1421751_a_at 1446521_at 1457765_at 1459734_at	21905	-8.126	-0.0392	No
71	PSMC2	1426611_at 1435859_x_at 1443307_at	21908	-8.187	0.0013	No