DatasetSet_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls
#ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls
#ATM_minus_versus_ATM_plus_repos
Phenotypephenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in classATM_minus
GeneSetREACTOME_DIABETES_PATHWAYS
Enrichment Score (ES)0.6070403
Normalized Enrichment Score (NES)2.4134445
Nominal p-value0.0
FDR q-value0.0
FWER p-Value0.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: REACTOME_DIABETES_PATHWAYS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1COX8A1416112_at 1436409_at 1448222_x_at19.9180.0340Yes
2COX5B1416902_a_at 1435613_x_at 1436149_at 1448514_at 1454716_x_at 1456588_x_at29.9130.0681Yes
3RPL141422128_at 1426793_a_at 1433688_x_at 1436688_x_at 1438507_x_at 1438626_x_at49.8860.1020Yes
4CYCS1422484_at 1445484_at109.4420.1342Yes
5PDHA11418560_at 1446954_at 1449137_at528.8110.1626Yes
6RPS31435151_a_at 1447563_at 1455600_at1566.5250.1803Yes
7ATP5F11426742_at 1433562_s_at1856.1170.2000Yes
8MBTPS11431385_a_at 1431386_s_at 1448240_at2535.4770.2157Yes
9CS1422577_at 1422578_at 1450667_a_at2635.4150.2339Yes
10TPI11415918_a_at 1435659_a_at 1452927_x_at2905.2450.2507Yes
11ATP5G11416020_a_at 1444874_at3085.1430.2676Yes
12DLD1423159_at4704.4570.2755Yes
13F21418897_at5664.1550.2855Yes
14PKM21417308_at5764.1230.2992Yes
15SSR21449930_a_at7433.6690.3042Yes
16SDHD1428235_at 1437489_x_at7643.6370.3158Yes
17ATP5L1448203_at8253.5040.3250Yes
18NDUFV11415966_a_at 1415967_at 1456015_x_at8513.4610.3358Yes
19UQCRFS11450968_at8593.4400.3473Yes
20NDUFV21428179_at 1438159_x_at 1452692_a_at9173.3110.3560Yes
21UQCR1448292_at9233.3010.3671Yes
22ATP5J1416143_at10263.1290.3732Yes
23NDUFS81423907_a_at 1423908_at 1434212_at 1434213_x_at 1434579_x_at 1455283_x_at10503.1020.3828Yes
24SDHB1418005_at10603.0900.3930Yes
25RPL41425183_a_at10883.0400.4022Yes
26EIF2S11440272_at 1452662_a_at11023.0250.4120Yes
27NDUFB101428322_a_at11063.0180.4222Yes
28RPS3A1422475_a_at11972.9050.4281Yes
29RPL181437005_a_at 1450372_a_at12362.8620.4362Yes
30NDUFA81423692_at12742.8210.4442Yes
31NDUFA71422976_x_at 1428360_x_at 1436567_a_at 1450818_a_at 1455749_x_at14392.6570.4458Yes
32IGFBP61417933_at14812.6130.4529Yes
33SUCLG11415891_at15212.5720.4599Yes
34PLA2G71430700_a_at16012.4810.4648Yes
35EXOC51436817_at 1438126_at16762.4100.4697Yes
36ATP5E1416567_s_at17112.3770.4763Yes
37ETFB1428181_at17562.3400.4823Yes
38NDUFB51417102_a_at 1448589_at18002.3060.4882Yes
39UQCRC11428782_a_at18222.2820.4951Yes
40NDUFB61434056_a_at 1434057_at18312.2750.5026Yes
41IDH3G1416788_a_at 1416789_at18352.2730.5102Yes
42ATP5O1416278_a_at19282.1980.5136Yes
43SEC61B1417083_at20262.1290.5164Yes
44NDUFA61448427_at20362.1220.5233Yes
45NDUFS61433603_at20742.0940.5288Yes
46RPS191449243_a_at 1460442_at20852.0850.5355Yes
47COX6C1415970_at 1434491_a_at20982.0780.5421Yes
48NDUFS31423737_at22671.9730.5411Yes
49NDUFA91416663_at23631.9100.5433Yes
50IDH3A1422500_at 1422501_s_at 1432016_a_at 1447701_x_at23941.8950.5485Yes
51GLP1R1422330_at24161.8770.5540Yes
52SPCS31451175_at24701.8550.5579Yes
53UQCRC21428631_a_at 1435757_a_at25281.8220.5615Yes
54RPL371453729_a_at25561.8090.5665Yes
55COX7C1448112_at 1459884_at 1459885_s_at27551.7310.5634Yes
56NDUFC11416285_at 1448284_a_at27871.7210.5679Yes
57NDUFS71424313_a_at 1451312_at27971.7170.5733Yes
58ATP5C11416058_s_at 1438809_at28561.6960.5765Yes
59ADRA2A1423022_at 1433600_at 1433601_at29081.6780.5799Yes
60RPL81417762_a_at29751.6520.5826Yes
61RPS4X1416276_a_at30741.6140.5836Yes
62KLF41417394_at 1417395_at30801.6120.5889Yes
63ATP5A11420037_at 1423111_at 1449710_s_at30981.6060.5937Yes
64RPS251430978_at 1451068_s_at32631.5510.5915Yes
65IGF11419519_at 1436497_at 1437401_at 1452014_a_at32991.5400.5952Yes
66RPL27A1437729_at33001.5400.6004Yes
67SEC61G1423090_x_at33081.5380.6054Yes
68RPL61416546_a_at36641.4180.5940Yes
69MDH21416478_a_at 1433984_a_at36671.4180.5988Yes
70ATP5B1416829_at36751.4160.6033Yes
71SRP721428876_at 1428877_at37001.4100.6070Yes
72RPL111417615_a_at38121.3780.6067No
73COX6B11416565_at 1436757_a_at40971.3090.5981No
74SYT51422531_at42361.2820.5962No
75CHRM31422258_at43731.2540.5943No
76RPSA1416196_at 1448245_at43961.2490.5975No
77ATP5J21416269_at 1435395_s_at45931.2140.5927No
78ATP5I1422525_at 1434053_x_at 1450640_x_at46281.2060.5953No
79RPS231460175_at46361.2050.5991No
80PRKAR2B1430640_a_at 1438664_at 1456475_s_at46561.2000.6024No
81RPS21431766_x_at48721.1580.5965No
82GNAS1421740_at 1427789_s_at 1443007_at 1443375_at 1444767_at 1450186_s_at 1453413_at57731.0130.5586No
83RPL411422623_x_at 1455578_x_at58211.0070.5599No
84ABCC81455765_a_at 1457066_at59280.9960.5585No
85NDUFB81448198_a_at 1458404_at59380.9950.5615No
86RPS51416054_at61210.9680.5565No
87NDUFS21451096_at62010.9570.5561No
88RPS241436064_x_at 1436500_at 1453362_x_at 1455195_at 1456628_x_at73330.7950.5069No
89MMP21416136_at 1439364_a_at77260.7460.4915No
90RPL281416074_a_at83150.6670.4668No
91UQCRQ1427880_at 1430326_s_at 1437134_at 1452613_at84130.6560.4646No
92IQGAP11417379_at 1417380_at 1431395_a_at 1431396_at 1434998_at 1445724_at 1458124_at85020.6450.4627No
93ATP5D1423716_s_at 1456580_s_at85160.6440.4644No
94NDUFB31416547_at87050.6200.4579No
95NFYA1422082_a_at 1427808_at 1452560_a_at87950.6110.4559No
96SRP191450891_at88460.6040.4556No
97RPS15A1453467_s_at 1457726_at89960.5870.4508No
98NDUFS51416494_at 1416495_s_at91400.5700.4462No
99GCG1425952_a_at91410.5690.4482No
100IGFALS1422826_at91710.5650.4488No
101NDUFA111429708_at 1444154_at92240.5600.4483No
102NDUFB71416417_a_at 1448331_at94710.5310.4388No
103KCNJ111450515_at 1455417_at96180.5130.4339No
104NDUFC21431670_at104000.4270.3995No
105SLC30A71450697_at104690.4210.3978No
106COX6A11417417_a_at105990.4080.3933No
107PFKFB11427213_at106510.4020.3923No
108RPS281451101_a_at106830.3980.3923No
109ERN11421240_at 1431886_at 1437119_at 1438583_at 1438997_at 1450176_at107020.3960.3928No
110RPL37A1416217_a_at 1460543_x_at107160.3950.3936No
111LEP1422582_at107800.3870.3920No
112NDUFA101418068_at 1448934_at108530.3780.3900No
113RPL18A1428152_a_at108540.3770.3913No
114NDUFB41428075_at 1428076_s_at 1432427_at108800.3750.3914No
115COX4I11448322_a_at110650.3540.3842No
116NDUFA41424085_at115930.2950.3610No
117PCSK21428305_at 1444147_at 1447991_at 1447992_s_at 1448312_at116060.2940.3615No
118RPL391423032_at 1450840_a_at119970.2510.3444No
119RPS201456373_x_at 1456436_x_at121850.2330.3367No
120RPL191416219_at124790.2010.3239No
121PFKFB21422090_a_at 1422091_at 1422092_at 1429486_at 1431901_a_at128850.1540.3058No
122CPE1415949_at131220.1260.2954No
123DDOST1416493_at 1420179_at131380.1250.2952No
124RPLP21415879_a_at132230.1160.2917No
125RPS141436586_x_at132350.1140.2916No
126SDHA1426688_at 1426689_s_at 1445317_at133440.1000.2870No
127KIF5B1418427_at 1418428_at 1418429_at 1418430_at 1418431_at133550.0980.2869No
128RAP1A1424139_at134640.0860.2822No
129NDUFS41418117_at 1438166_x_at 1444464_at 1448959_at 1459760_at14455-0.0520.2369No
130IGFBP11418918_at14815-0.1060.2208No
131HSPA51416064_a_at 1427464_s_at 1447824_x_at15179-0.1660.2047No
132NKX2-21421112_at15245-0.1770.2023No
133RPLP11416277_a_at15269-0.1810.2019No
134ETFDH1451084_at 1458152_at15409-0.2040.1962No
135NDUFA21417368_s_at15647-0.2490.1862No
136PRKCA1427562_a_at 1443069_at 1445028_at 1445395_at 1446598_at 1450945_at15983-0.3190.1719No
137FAU1417452_a_at16050-0.3360.1700No
138SLC2A21449067_at16248-0.3820.1623No
139SSR41427096_s_at 1435709_at 1448524_s_at16259-0.3840.1631No
140RPS211430288_x_at 1433549_x_at 1433721_x_at 1434358_x_at16439-0.4290.1564No
141ATF41438992_x_at 1439258_at 1448135_at16468-0.4380.1566No
142IGFBP51422313_a_at 1452114_s_at16489-0.4430.1572No
143RPL171423855_x_at 1435791_x_at 1453752_at16511-0.4460.1578No
144SPCS21423215_at 1450907_at17121-0.6320.1320No
145NDUFAB11428159_s_at 1428160_at 1435934_at 1447919_x_at 1453565_at 1458678_at17435-0.7520.1202No
146SRP141418567_a_at 1418568_x_at 1454615_x_at 1455939_x_at17436-0.7520.1228No
147UQCRB1416337_at 1455997_a_at17784-0.8950.1099No
148RPS171437510_x_at 1438501_at 1438986_x_at 1455662_x_at 1457940_at 1459986_a_at18060-1.0020.1007No
149PFKFB41456888_at18194-1.0370.0982No
150SRP541430476_at 1441233_at 1441480_at18290-1.0760.0975No
151ATF61435444_at 1453288_at 1456021_at18499-1.1690.0920No
152RPS161416404_s_at 1437196_x_at 1455835_at19762-1.9990.0409No
153KLK31450718_at 1453389_a_at19770-2.0020.0475No
154OGDH1445632_at 1451274_at19889-2.0760.0492No
155IGFBP41421991_a_at 1421992_a_at 1423756_s_at 1423757_x_at 1437405_a_at 1437406_x_at20010-2.1860.0512No
156RPL51423665_a_at 1447460_at20048-2.2190.0571No
157EXOC81436048_at20982-3.5560.0265No
158VAMP21420833_at 1420834_at21473-5.0280.0213No
Table: GSEA details [plain text format]



Fig 2: REACTOME_DIABETES_PATHWAYS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: REACTOME_DIABETES_PATHWAYS: Random ES distribution   
Gene set null distribution of ES for REACTOME_DIABETES_PATHWAYS