Validation Results

Resource: intact/yeast_krogan-2006-2_05.xml; different types of problem: 6

number of physical entities : 4000 number of genes : 0 number of pathways : 0 number of interactions : 2000
auto-fix: true; normalize:
errors/warnings: 2827 - not fixed: 2824; errors not fixed: 0
Modified BioPAX ("escaped" RDF in HTML; choose BioPAX or XML as return if you plan to process it)

WARNING: cardinality.violated , category: SPECIFICATION, cases: 2002, not fixed: 2002
Cardinality violation

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property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
object: http://pathwaycommons.org/yeast1/ModificationFeature_002196c0-0ec1-49ae-a51c-6c8142cf31ae__470567_
property: featureLocation requires exactly 1 value(s)
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object: http://pathwaycommons.org/yeast1/ModificationFeature_00260d5c-a3c5-46bf-80be-adc42ef52066__476210_
property: featureLocation requires exactly 1 value(s)
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object: http://pathwaycommons.org/yeast1/ModificationFeature_002e2580-b0ca-489b-aa94-f6173fc93df6__476519_
property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
object: http://pathwaycommons.org/yeast1/ModificationFeature_00423a6d-6e2b-47f9-a46f-9c5ad40751bc__474871_
property: featureLocation requires exactly 1 value(s)
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object: http://pathwaycommons.org/yeast1/ModificationFeature_005348d2-750a-4bc9-963b-2e22263b9a3e__473754_
property: featureLocation requires exactly 1 value(s)
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property: featureLocation requires exactly 1 value(s)
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(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
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property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
object: http://pathwaycommons.org/yeast1/ModificationFeature_00bd0565-e33d-4c07-b205-39c6a1bc36ee__472382_
property: featureLocation requires exactly 1 value(s)
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property: featureLocation requires exactly 1 value(s)
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property: featureLocation requires exactly 1 value(s)
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property: featureLocation requires exactly 1 value(s)
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property: featureLocation requires exactly 1 value(s)
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property: featureLocation requires exactly 1 value(s)
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property: featureLocation requires exactly 1 value(s)
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property: featureLocation requires exactly 1 value(s)
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property: featureLocation requires exactly 1 value(s)
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property: featureLocation requires exactly 1 value(s)
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property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
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property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
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property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
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property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
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property: featureLocation requires exactly 1 value(s)
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property: featureLocation requires exactly 1 value(s)
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property: featureLocation requires exactly 1 value(s)
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property: featureLocation requires exactly 1 value(s)
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property: featureLocation requires exactly 1 value(s)
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property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
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property: featureLocation requires exactly 1 value(s)
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property: featureLocation requires exactly 1 value(s)
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property: featureLocation requires exactly 1 value(s)
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property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
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property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
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property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
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property: featureLocation requires exactly 1 value(s)
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property: featureLocation requires exactly 1 value(s)
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property: featureLocation requires exactly 1 value(s)
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(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
object: http://pathwaycommons.org/yeast1/ModificationFeature_fda46709-5d11-4a28-9a71-ac753153a62c__473375_
property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
object: http://pathwaycommons.org/yeast1/ModificationFeature_fdd98001-b892-4a16-9d54-b66df5127e87__474675_
property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
object: http://pathwaycommons.org/yeast1/ModificationFeature_fddbd825-0369-4914-a711-ab537f43bd46__470218_
property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
object: http://pathwaycommons.org/yeast1/ModificationFeature_fe28c564-4283-47d5-a7a3-c9e03c3a081a__470027_
property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
object: http://pathwaycommons.org/yeast1/ModificationFeature_fe3ffc58-2681-4357-9761-d582ea87518c__471543_
property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
object: http://pathwaycommons.org/yeast1/ModificationFeature_fe937eb5-b3e9-45c3-8bd6-94fe987e5b8e__472914_
property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
object: http://pathwaycommons.org/yeast1/ModificationFeature_fec37303-a2de-4596-a3b4-2c57486655e1__476350_
property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
object: http://pathwaycommons.org/yeast1/ModificationFeature_fed17ce4-9c4e-4ba0-a93f-73b215478f68__472243_
property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
object: http://pathwaycommons.org/yeast1/ModificationFeature_fef5712e-05ba-4357-9b8c-5421baf3f63e__471578_
property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
object: http://pathwaycommons.org/yeast1/ModificationFeature_ff09d3a4-e008-423e-9623-6dd19c4157f9__471863_
property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
object: http://pathwaycommons.org/yeast1/ModificationFeature_ff20d493-c50c-4b93-9fe8-7805a4e88d1e__472931_
property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
object: http://pathwaycommons.org/yeast1/ModificationFeature_ff5088f1-2719-4133-86f8-19addb6418d6__473819_
property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
object: http://pathwaycommons.org/yeast1/ModificationFeature_ffa1a253-8639-4ae0-99ad-9727dc25dfd6__474803_
property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
object: http://pathwaycommons.org/yeast1/ModificationFeature_ffa9bea9-f65e-4c7a-bc38-4598481c3768__471087_
property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
object: http://pathwaycommons.org/yeast1/ModificationFeature_ffb5bdb3-5b10-4858-8a6b-d65ae819b663__470170_
property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
object: http://pathwaycommons.org/yeast1/RTV_intact-secondary
property: xref requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ControlledVocabularyXrefCRRule)
object: http://pathwaycommons.org/yeast1/RTV_uniprot-removed-ac
property: xref requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ControlledVocabularyXrefCRRule)

WARNING: illegal.cv.term , category: SPECIFICATION, cases: 3, not fixed: 3
Term is not found in the recommended controlled vocabulary (- wrong name/spelling or the identifier/accession is used instead of the term)

WARNING: illegal.cv.xref , category: SPECIFICATION, cases: 1, not fixed: 1
Unification xref cannot be resolved to a recommended term for the controlled vocabulary

WARNING: invalid.id.format , category: RECOMMENDATION, cases: 816, not fixed: 815
Xref 'id' value does not match the standard pattern for this type of db identifier. If this is due to the version of the object is embedded into the id, please use the idVersion property instead. If the database was not properly recognized (and the pattern is wrong), consider using a standard, more specific, db name (or contact the MIRIAM or identifiers.org team).

[FIXED!] object: http://pathwaycommons.org/yeast1/RelationshipXref_cygd_YPR137c-a
db: cygd (recognized as: CYGD), id: YPR137c-a, pattern: ^\w{2,3}\d{2,4}(\w)?$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_intact_MINT-2316536_intact-secondary
db: intact (recognized as: INTACT), id: MINT-2316536, pattern: ^EBI\-[0-9]+$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_intact_MINT-2493025_intact-secondary
db: intact (recognized as: INTACT), id: MINT-2493025, pattern: ^EBI\-[0-9]+$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_intact_MINT-2494178_intact-secondary
db: intact (recognized as: INTACT), id: MINT-2494178, pattern: ^EBI\-[0-9]+$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_intact_MINT-2494212_intact-secondary
db: intact (recognized as: INTACT), id: MINT-2494212, pattern: ^EBI\-[0-9]+$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_intact_MINT-2781010_intact-secondary
db: intact (recognized as: INTACT), id: MINT-2781010, pattern: ^EBI\-[0-9]+$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_intact_MINT-2782453_intact-secondary
db: intact (recognized as: INTACT), id: MINT-2782453, pattern: ^EBI\-[0-9]+$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_intact_MINT-2785764_intact-secondary
db: intact (recognized as: INTACT), id: MINT-2785764, pattern: ^EBI\-[0-9]+$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_intact_MINT-481729_intact-secondary
db: intact (recognized as: INTACT), id: MINT-481729, pattern: ^EBI\-[0-9]+$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_intact_MINT-545233_intact-secondary
db: intact (recognized as: INTACT), id: MINT-545233, pattern: ^EBI\-[0-9]+$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_intact_MINT-665405_intact-secondary
db: intact (recognized as: INTACT), id: MINT-665405, pattern: ^EBI\-[0-9]+$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_O13539
db: mint (recognized as: MINT), id: O13539, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_O42831
db: mint (recognized as: MINT), id: O42831, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_O94742
db: mint (recognized as: MINT), id: O94742, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P00358
db: mint (recognized as: MINT), id: P00358, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P00360
db: mint (recognized as: MINT), id: P00360, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P00817
db: mint (recognized as: MINT), id: P00817, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P00927
db: mint (recognized as: MINT), id: P00927, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P01097
db: mint (recognized as: MINT), id: P01097, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P01098
db: mint (recognized as: MINT), id: P01098, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P02293
db: mint (recognized as: MINT), id: P02293, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P02294
db: mint (recognized as: MINT), id: P02294, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P02309
db: mint (recognized as: MINT), id: P02309, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P02829
db: mint (recognized as: MINT), id: P02829, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P04050
db: mint (recognized as: MINT), id: P04050, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P04051
db: mint (recognized as: MINT), id: P04051, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P04786
db: mint (recognized as: MINT), id: P04786, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P04806
db: mint (recognized as: MINT), id: P04806, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P04807
db: mint (recognized as: MINT), id: P04807, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P04840
db: mint (recognized as: MINT), id: P04840, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P04911
db: mint (recognized as: MINT), id: P04911, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P04912
db: mint (recognized as: MINT), id: P04912, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P05030
db: mint (recognized as: MINT), id: P05030, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P05755
db: mint (recognized as: MINT), id: P05755, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P06101
db: mint (recognized as: MINT), id: P06101, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P06103
db: mint (recognized as: MINT), id: P06103, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P06105
db: mint (recognized as: MINT), id: P06105, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P06168
db: mint (recognized as: MINT), id: P06168, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P06208
db: mint (recognized as: MINT), id: P06208, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P06242
db: mint (recognized as: MINT), id: P06242, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P06704
db: mint (recognized as: MINT), id: P06704, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P06774
db: mint (recognized as: MINT), id: P06774, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P06782
db: mint (recognized as: MINT), id: P06782, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P06785
db: mint (recognized as: MINT), id: P06785, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P06787
db: mint (recognized as: MINT), id: P06787, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P06844
db: mint (recognized as: MINT), id: P06844, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P07149
db: mint (recognized as: MINT), id: P07149, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P07246
db: mint (recognized as: MINT), id: P07246, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P07260
db: mint (recognized as: MINT), id: P07260, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P07264
db: mint (recognized as: MINT), id: P07264, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P07267
db: mint (recognized as: MINT), id: P07267, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P07272
db: mint (recognized as: MINT), id: P07272, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P07273
db: mint (recognized as: MINT), id: P07273, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P07278
db: mint (recognized as: MINT), id: P07278, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P07284
db: mint (recognized as: MINT), id: P07284, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P07342
db: mint (recognized as: MINT), id: P07342, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P07347
db: mint (recognized as: MINT), id: P07347, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P07702
db: mint (recognized as: MINT), id: P07702, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P07703
db: mint (recognized as: MINT), id: P07703, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P08425
db: mint (recognized as: MINT), id: P08425, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P08518
db: mint (recognized as: MINT), id: P08518, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P09032
db: mint (recognized as: MINT), id: P09032, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P09119
db: mint (recognized as: MINT), id: P09119, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P09201
db: mint (recognized as: MINT), id: P09201, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P09232
db: mint (recognized as: MINT), id: P09232, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P09435
db: mint (recognized as: MINT), id: P09435, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P09436
db: mint (recognized as: MINT), id: P09436, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P09620
db: mint (recognized as: MINT), id: P09620, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P09798
db: mint (recognized as: MINT), id: P09798, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P0CG63
db: mint (recognized as: MINT), id: P0CG63, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P0CS91
db: mint (recognized as: MINT), id: P0CS91, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P0CT05
db: mint (recognized as: MINT), id: P0CT05, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P10080
db: mint (recognized as: MINT), id: P10080, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P10663
db: mint (recognized as: MINT), id: P10663, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P10823
db: mint (recognized as: MINT), id: P10823, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P10961
db: mint (recognized as: MINT), id: P10961, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P11353
db: mint (recognized as: MINT), id: P11353, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P11632
db: mint (recognized as: MINT), id: P11632, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P12685
db: mint (recognized as: MINT), id: P12685, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P12688
db: mint (recognized as: MINT), id: P12688, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P12695
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P38804
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P38903
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P38922
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12344
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12406
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12440
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12464
db: mint (recognized as: MINT), id: Q12464, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12494
db: mint (recognized as: MINT), id: Q12494, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12508
db: mint (recognized as: MINT), id: Q12508, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12517
db: mint (recognized as: MINT), id: Q12517, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12523
db: mint (recognized as: MINT), id: Q12523, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12692
db: mint (recognized as: MINT), id: Q12692, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12753
db: mint (recognized as: MINT), id: Q12753, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12754
db: mint (recognized as: MINT), id: Q12754, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q3E840
db: mint (recognized as: MINT), id: Q3E840, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q92325
db: mint (recognized as: MINT), id: Q92325, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q99181
db: mint (recognized as: MINT), id: Q99181, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q99207
db: mint (recognized as: MINT), id: Q99207, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q99316
db: mint (recognized as: MINT), id: Q99316, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q99394
db: mint (recognized as: MINT), id: Q99394, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q9URQ5
db: mint (recognized as: MINT), id: Q9URQ5, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)

WARNING: no.display.name , category: RECOMMENDATION, cases: 2, all fixed!
No display name is specified. It is useful to have one for the visualization purposes

WARNING: not.allowed.xref , category: RECOMMENDATION, cases: 3, not fixed: 3
Database name in the UnificationXref (of a BioPAX element), probably, does not make sense for this type of element