Validation Results

Resource: intact/yeast_08.xml; different types of problem: 11

number of genes : 0 number of physical entities : 4074 number of interactions : 1432 number of pathways : 0
auto-fix: true; normalize:
errors/warnings: 5398 - not fixed: 5364; errors not fixed: 195
Modified BioPAX ("escaped" RDF in HTML; choose BioPAX or XML as return if you plan to process it)

ERROR: min.cardinality.violated , category: SPECIFICATION, cases: 195, not fixed: 195
Minimal cardinality violation

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property: experimentalFormDescription requires at least 1 value(s).
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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property: experimentalFormDescription requires at least 1 value(s).
(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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property: experimentalFormDescription requires at least 1 value(s).
(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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property: experimentalFormDescription requires at least 1 value(s).
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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property: experimentalFormDescription requires at least 1 value(s).
(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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property: experimentalFormDescription requires at least 1 value(s).
(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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property: experimentalFormDescription requires at least 1 value(s).
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property: experimentalFormDescription requires at least 1 value(s).
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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property: experimentalFormDescription requires at least 1 value(s).
(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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property: experimentalFormDescription requires at least 1 value(s).
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property: experimentalFormDescription requires at least 1 value(s).
(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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property: experimentalFormDescription requires at least 1 value(s).
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property: experimentalFormDescription requires at least 1 value(s).
(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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property: experimentalFormDescription requires at least 1 value(s).
(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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property: experimentalFormDescription requires at least 1 value(s).
(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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property: experimentalFormDescription requires at least 1 value(s).
(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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property: experimentalFormDescription requires at least 1 value(s).
(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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property: experimentalFormDescription requires at least 1 value(s).
(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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property: experimentalFormDescription requires at least 1 value(s).
(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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property: experimentalFormDescription requires at least 1 value(s).
(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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property: experimentalFormDescription requires at least 1 value(s).
(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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property: experimentalFormDescription requires at least 1 value(s).
(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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property: experimentalFormDescription requires at least 1 value(s).
(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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property: experimentalFormDescription requires at least 1 value(s).
(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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property: experimentalFormDescription requires at least 1 value(s).
(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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property: experimentalFormDescription requires at least 1 value(s).
(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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property: experimentalFormDescription requires at least 1 value(s).
(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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property: experimentalFormDescription requires at least 1 value(s).
(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)
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property: experimentalFormDescription requires at least 1 value(s).
(found by: org.biopax.validator.rules.ExperimentalFormDescriptionCRRule)

WARNING: cardinality.violated , category: SPECIFICATION, cases: 2546, not fixed: 2546
Cardinality violation

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(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
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property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
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property: featureLocation requires exactly 1 value(s)
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property: featureLocation requires exactly 1 value(s)
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property: featureLocation requires exactly 1 value(s)
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(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
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property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
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(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
object: http://pathwaycommons.org/yeast1/ModificationFeature_fd69060a-f95d-4c82-ada1-d748f99b6c8c__2610938_
property: featureLocation requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
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(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
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(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
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(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
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(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
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(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
object: http://pathwaycommons.org/yeast1/ModificationFeature_fe7f75fb-8fdf-4733-bae1-1cb9ef05e836__750662_
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(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
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(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
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(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
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(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
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(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
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(found by: org.biopax.validator.rules.ModificationFeatureLocationCRRule)
object: http://pathwaycommons.org/yeast1/RTV_imex_source
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(found by: org.biopax.validator.rules.ControlledVocabularyXrefCRRule)
object: http://pathwaycommons.org/yeast1/RTV_intact-secondary
property: xref requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ControlledVocabularyXrefCRRule)
object: http://pathwaycommons.org/yeast1/RTV_uniprot-removed-ac
property: xref requires exactly 1 value(s)
(found by: org.biopax.validator.rules.ControlledVocabularyXrefCRRule)

WARNING: illegal.cv.term , category: SPECIFICATION, cases: 472, not fixed: 472
Term is not found in the recommended controlled vocabulary (- wrong name/spelling or the identifier/accession is used instead of the term)

object: http://pathwaycommons.org/yeast1/InteractionVocabulary_physical_interaction
Illegal term(s): [physical interaction]; [Valid 'MI' terms: ALL children of MI:0190]
(found by: org.biopax.validator.rules.InteractionTypeCvRule)
object: http://pathwaycommons.org/yeast1/RTV_imex_source
Illegal term(s): [imex source]; [Valid 'MI' terms: ALL children of MI:0353]
(found by: org.biopax.validator.rules.RelationshipTypeCvRule)
object: http://pathwaycommons.org/yeast1/RTV_intact-secondary
Illegal term(s): [intact-secondary]; [Valid 'MI' terms: ALL children of MI:0353]
(found by: org.biopax.validator.rules.RelationshipTypeCvRule)
object: http://pathwaycommons.org/yeast1/RTV_uniprot-removed-ac
Illegal term(s): [uniprot-removed-ac]; [Valid 'MI' terms: ALL children of MI:0353]
(found by: org.biopax.validator.rules.RelationshipTypeCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_1-108_141-307_binding_region
Illegal term(s): [1-108/141-307 binding region]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_1-138_binding_region
Illegal term(s): [1-138 binding region]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_1-154_binding_region
Illegal term(s): [1-154 binding region]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_1-234_binding_site
Illegal term(s): [1-234 binding site]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_13Myc_tag
Illegal term(s): [13Myc tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_146
Illegal term(s): [146]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_152
Illegal term(s): [152]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_190-210_binding_region
Illegal term(s): [190-210 binding region]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_2210-2413_binding_region
Illegal term(s): [2210-2413 binding region]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_238
Illegal term(s): [238]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_243
Illegal term(s): [243]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_26
Illegal term(s): [26]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_288-494_binding_region
Illegal term(s): [288-494 binding region]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_307
Illegal term(s): [307]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_32P-label
Illegal term(s): [32P-label]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_35S-label
Illegal term(s): [35S-label]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_36
Illegal term(s): [36]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_402-468_binding_region
Illegal term(s): [402-468 binding region]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_457-468_binding_region
Illegal term(s): [457-468 binding region]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_5-172_binding_region
Illegal term(s): [5-172 binding region]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_520
Illegal term(s): [520]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_64-199_binding_region
Illegal term(s): [64-199 binding region]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_88
Illegal term(s): [88]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_90
Illegal term(s): [90]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_923-1471
Illegal term(s): [923-1471]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_94
Illegal term(s): [94]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary__NLS_binding_region
Illegal term(s): [ΔNLS binding region]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_A192C_C193G__A194C
Illegal term(s): [A192C,C193G, A194C]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_A_methylation
Illegal term(s): [A methylation]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Acrylodan-label
Illegal term(s): [Acrylodan-label]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_ala279_ala280
Illegal term(s): [ala279_ala280]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_ala300
Illegal term(s): [ala300]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_arg-2
Illegal term(s): [arg-2]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_arg346
Illegal term(s): [arg346]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_asn281
Illegal term(s): [asn281]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_asn57
Illegal term(s): [asn57]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_asp285
Illegal term(s): [asp285]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_autophosphorylatio
Illegal term(s): [autophosphorylatio]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_autophosphorylation
Illegal term(s): [autophosphorylation]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Binding_region_88-164
Illegal term(s): [Binding region 88-164]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Binding_region_90-142
Illegal term(s): [Binding region 90-142]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_binding_site
Illegal term(s): [binding site]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Biotin-tag
Illegal term(s): [Biotin-tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_c-term
Illegal term(s): [c-term]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_c-terminal
Illegal term(s): [c-terminal]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_C-terminal_domain
Illegal term(s): [C-terminal domain]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_c-terminus
Illegal term(s): [c-terminus]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_c_terminus
Illegal term(s): [c_terminus]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_CBP-tag
Illegal term(s): [CBP-tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_CL-label
Illegal term(s): [CL-label]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Cy3-label
Illegal term(s): [Cy3-label]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Cy5-label
Illegal term(s): [Cy5-label]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_cytoplasmic_region
Illegal term(s): [cytoplasmic region]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Dansyl-label
Illegal term(s): [Dansyl-label]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Fc-tag
Illegal term(s): [Fc-tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_fg_motif
Illegal term(s): [fg motif]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_fg_region
Illegal term(s): [fg region]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_FIAsH-label
Illegal term(s): [FIAsH-label]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Flag-tag
Illegal term(s): [Flag-tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_FLAG_Tag
Illegal term(s): [FLAG Tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_flag_tagged
Illegal term(s): [flag tagged]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_fusion_proteins
Illegal term(s): [fusion proteins]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_GEP_domain__1-160_
Illegal term(s): [GEP domain (1-160)]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_GFP
Illegal term(s): [GFP]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_GFP-tag
Illegal term(s): [GFP-tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_gfp_tagged
Illegal term(s): [gfp tagged]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_gln33
Illegal term(s): [gln33]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_gln33_gly34
Illegal term(s): [gln33_gly34]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_glu304
Illegal term(s): [glu304]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_glu575
Illegal term(s): [glu575]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_glu575_glu576
Illegal term(s): [glu575_glu576]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_glu576
Illegal term(s): [glu576]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_gly97asp_del98-101
Illegal term(s): [gly97asp del98-101]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_GST-tag
Illegal term(s): [GST-tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_GST_tag
Illegal term(s): [GST Tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_gst_tagged
Illegal term(s): [gst tagged]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_HA-tag
Illegal term(s): [HA-tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_HA3_Tag
Illegal term(s): [HA3 Tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_HA_Tag
Illegal term(s): [HA tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_ha_tagged
Illegal term(s): [ha tagged]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_His-tag
Illegal term(s): [His-tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_His_tag
Illegal term(s): [His Tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_his_tagged
Illegal term(s): [his tagged]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_K4me2
Illegal term(s): [K4me2]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_K4me3
Illegal term(s): [K4me3]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_label
Illegal term(s): [label]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_LexA-tag
Illegal term(s): [LexA-tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_lig_pam2_1_motif
Illegal term(s): [lig_pam2_1 motif]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_luminal_region
Illegal term(s): [luminal region]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_lys-19
Illegal term(s): [lys-19]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_lys-4
Illegal term(s): [lys-4]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_lys-5
Illegal term(s): [lys-5]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_lys262
Illegal term(s): [lys262]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_lys348
Illegal term(s): [lys348]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_MBP-tag
Illegal term(s): [MBP-tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_mc_region
Illegal term(s): [mc region]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_methylation
Illegal term(s): [methylation]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_MIT_domain
Illegal term(s): [MIT domain]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_MTSSL-label
Illegal term(s): [MTSSL-label]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_multiple_tag
Illegal term(s): [multiple tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Myc
Illegal term(s): [Myc]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Myc-tag
Illegal term(s): [Myc-tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Myc9_Tag
Illegal term(s): [Myc9 Tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_myc_tag
Illegal term(s): [Myc Tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_myc_tagged
Illegal term(s): [myc tagged]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_n-terminal
Illegal term(s): [n-terminal]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_n-terminus
Illegal term(s): [n-terminus]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_n_terminal
Illegal term(s): [n terminal]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_n_terminal_region
Illegal term(s): [n_terminal_region]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_n_terminus
Illegal term(s): [n_terminus]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Arg218_Arg219delinsAlaAla_Arg222Ala_Arg226Ala_Arg229Ala_
Illegal term(s): [p.[Arg218_Arg219delinsAlaAla;Arg222Ala;Arg226Ala;Arg229Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Arg222Ala_Pro238Ala_Leu239Ala_
Illegal term(s): [p.[Arg222Ala;Pro238Ala;Leu239Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Arg235Ala_Pro238Ala_Leu239Ala_
Illegal term(s): [p.[Arg235Ala;Pro238Ala;Leu239Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Arg512_Arg513delinsAlaAla_Arg516Ala_Arg519Ala_
Illegal term(s): [p.[Arg512_Arg513delinsAlaAla;Arg516Ala;Arg519Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Arg697Asp_Asp723Arg_
Illegal term(s): [p.[Arg697Asp;Asp723Arg]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Asn572Tyr_Glu575Ala_
Illegal term(s): [p.[Asn572Tyr;Glu575Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Asn79Cys_Ile155Cys_
Illegal term(s): [p.[Asn79Cys;Ile155Cys]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Asp723Arg_Arg730Asp_
Illegal term(s): [p.[Asp723Arg;Arg730Asp]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Cys47Ser_Cys142Ser_
Illegal term(s): [p.[Cys47Ser;Cys142Ser]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Gln572Leu_Gln573Leu_
Illegal term(s): [p.[Gln572Leu;Gln573Leu]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Glu554Ala_Met557_Leu558delinsSerSer_
Illegal term(s): [p.[Glu554Ala;Met557_Leu558delinsSerSer]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Glu554Ala_Met557Ser_Leu558Ser_
Illegal term(s): [p.[Glu554Ala;Met557Ser;Leu558Ser]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Ile24Ala_Leu25Ala_
Illegal term(s): [p.[Ile24Ala;Leu25Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Leu127Ala_Ile131Ala_
Illegal term(s): [p.[Leu127Ala;Ile131Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Leu350Ala_Leu360Ala_Leu383Ala_Leu396Ala_Leu408Ala_Leu421Ala_Leu440Ala_Leu449Ala_
Illegal term(s): [p.[Leu350Ala;Leu360Ala;Leu383Ala;Leu396Ala;Leu408Ala;Leu421Ala;Leu440Ala;Leu449Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Leu47Asp_Ile57Asp_
Illegal term(s): [p.[Leu47Asp;Ile57Asp]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Lys216Ala_Asn217Ala_Arg218Ala_Arg219Ala_
Illegal term(s): [p.[Lys216Ala;Asn217Ala;Arg218Ala;Arg219Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Lys337Arg_Lys352Arg_Lys358Arg_Lys374Arg_Lys387Arg_Lys400Arg_Lys422Arg_
Illegal term(s): [p.[Lys337Arg;Lys352Arg;Lys358Arg;Lys374Arg;Lys387Arg;Lys400Arg;Lys422Arg]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Lys424Arg_Lys432Arg_Lys453Arg_
Illegal term(s): [p.[Lys424Arg;Lys432Arg;Lys453Arg]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Lys55Asp_Phe56Pro_
Illegal term(s): [p.[Lys55Asp;Phe56Pro]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Lys87Glu_Lys88Glu_
Illegal term(s): [p.[Lys87Glu;Lys88Glu]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Phe151Ala_Phe156Ala_
Illegal term(s): [p.[Phe151Ala;Phe156Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Phe256Ala_Phe292Ala_
Illegal term(s): [p.[Phe256Ala;Phe292Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Phe29Ala_Phe30Ala_
Illegal term(s): [p.[Phe29Ala;Phe30Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Phe302Ala_Phe320Ala_Phe326Ala_Phe335Ala_Phe347Ala_Phe360Ala_Phe371Ala_Phe381Ala_Phe395Ala_
Illegal term(s): [p.[Phe302Ala;Phe320Ala;Phe326Ala;Phe335Ala;Phe347Ala;Phe360Ala;Phe371Ala;Phe381Ala;Phe395Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Phe351Ala_Phe361Ala_Phe370Ala_Phe384Ala_Phe397Ala_Phe409Ala_Phe422Ala_Phe431Ala_Phe441Ala_Phe450Ala_
Illegal term(s): [p.[Phe351Ala;Phe361Ala;Phe370Ala;Phe384Ala;Phe397Ala;Phe409Ala;Phe422Ala;Phe431Ala;Phe441Ala;Phe450Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Phe392Ala_Phe394Ala_
Illegal term(s): [p.[Phe392Ala;Phe394Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Phe439Leu_Met441Ala_
Illegal term(s): [p.[Phe439Leu;Met441Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Phe43Ala_Asn44Ala_
Illegal term(s): [p.[Phe43Ala;Asn44Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Phe99Ala_Arg100Ala_
Illegal term(s): [p.[Phe99Ala;Arg100Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Pro238Ala_Leu239Ala_
Illegal term(s): [p.[Pro238Ala;Leu239Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Pro82_Pro83delinsGlnAla_Pro105Ala_
Illegal term(s): [p.[Pro82_Pro83delinsGlnAla;Pro105Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Ser113Ala_His117Ala_Ser137Ala_
Illegal term(s): [p.[Ser113Ala;His117Ala;Ser137Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Ser113Ala_Ser117Ala_
Illegal term(s): [p.[Ser113Ala;Ser117Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Ser113Ala_Ser122Ala_Ser137Ala_
Illegal term(s): [p.[Ser113Ala;Ser122Ala;Ser137Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Ser122Asp_Ser137Asp_
Illegal term(s): [p.[Ser122Asp;Ser137Asp]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Ser30Ala_Ser271Ala_
Illegal term(s): [p.[Ser30Ala;Ser271Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Ser331Ala_Lys337Arg_Ser338Ala_Ser339Ala_Lys352Arg_Thr354Ala_Thr355Ala_Ser356Ala_Lys358Arg_Thr363Ala_Ser366Ala_Thr368Ala_Lys374Arg_Thr382Ala_Thr384Ala_Ser385Ala_Ser386Ala_Lys387Arg_Thr389Ala_Ser398Ala_Lys400Arg_Thr411Ala_Lys422Arg_
Illegal term(s): [p.[Ser331Ala;Lys337Arg;Ser338Ala;Ser339Ala;Lys352Arg;Thr354Ala;Thr355Ala;Ser356Ala;Lys358Arg;Thr363Ala;Ser366Ala;Thr368Ala;Lys374Arg;Thr382Ala;Thr384Ala;Ser385Ala;Ser386Ala;Lys387Arg;Thr389Ala;Ser398Ala;Lys400Arg;Thr411Ala;Lys422Arg]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Thr364Val_Asn367Ser_
Illegal term(s): [p.[Thr364Val;Asn367Ser]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Thr365Val_Asn367Ser_
Illegal term(s): [p.[Thr365Val;Asn367Ser]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Thr4Ala_Ser11Ala_Thr29Ala_Ser43Ala_Ser69Ala_Ser71Ala_Ser81Ala_Thr102Ala_
Illegal term(s): [p.[Thr4Ala;Ser11Ala;Thr29Ala;Ser43Ala;Ser69Ala;Ser71Ala;Ser81Ala;Thr102Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Thr4Glu_Ser11Glu_Thr29Glu_Ser43Glu_Ser69Glu_Ser71Glu_Ser81Glu_Thr102Glu_
Illegal term(s): [p.[Thr4Glu;Ser11Glu;Thr29Glu;Ser43Glu;Ser69Glu;Ser71Glu;Ser81Glu;Thr102Glu]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Thr56Ala_Leu57Ala_
Illegal term(s): [p.[Thr56Ala;Leu57Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Thr600Ala_Ser622Ala_
Illegal term(s): [p.[Thr600Ala;Ser622Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Thr8Ala_Ser18Ala_Ser44Ala_Ser51Ala_
Illegal term(s): [p.[Thr8Ala;Ser18Ala;Ser44Ala;Ser51Ala]]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ala237Asp
Illegal term(s): [p.Ala237Asp]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ala280_Asn281delinsThrAla
Illegal term(s): [p.Ala280_Asn281delinsThrAla]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ala297Glu
Illegal term(s): [p.Ala297Glu]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Arg1039Ala
Illegal term(s): [p.Arg1039Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Arg1041Ala
Illegal term(s): [p.Arg1041Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Arg1053Glu
Illegal term(s): [p.Arg1053Glu]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Arg1056Ala
Illegal term(s): [p.Arg1056Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Arg106Ala
Illegal term(s): [p.Arg106Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Arg171Glu
Illegal term(s): [p.Arg171Glu]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Arg197Glu
Illegal term(s): [p.Arg197Glu]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Arg224Asp
Illegal term(s): [p.Arg224Asp]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Arg235Ala
Illegal term(s): [p.Arg235Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Arg2388Gly
Illegal term(s): [p.Arg2388Gly]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Arg2388Lys
Illegal term(s): [p.Arg2388Lys]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Arg664Ala
Illegal term(s): [p.Arg664Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Arg697Ala
Illegal term(s): [p.Arg697Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Arg697Asp
Illegal term(s): [p.Arg697Asp]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Arg730Ala
Illegal term(s): [p.Arg730Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Arg730Asp
Illegal term(s): [p.Arg730Asp]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Arg78Leu
Illegal term(s): [p.Arg78Leu]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Arg88Asp
Illegal term(s): [p.Arg88Asp]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Asn1057Ala
Illegal term(s): [p.Asn1057Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Asn152Ala
Illegal term(s): [p.Asn152Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Asp111Ala
Illegal term(s): [p.Asp111Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Asp214Arg
Illegal term(s): [p.Asp214Arg]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Asp396Ala
Illegal term(s): [p.Asp396Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Asp54Ala
Illegal term(s): [p.Asp54Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Asp723Arg
Illegal term(s): [p.Asp723Arg]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Asp781Ala
Illegal term(s): [p.Asp781Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Asp797Ala
Illegal term(s): [p.Asp797Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Asp886Ala
Illegal term(s): [p.Asp886Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Asp890_Trp891delinsAlaAla
Illegal term(s): [p.Asp890_Trp891delinsAlaAla]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Asp995Ala
Illegal term(s): [p.Asp995Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Cys140Ser
Illegal term(s): [p.Cys140Ser]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Cys142Glu
Illegal term(s): [p.Cys142Glu]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Cys142Met
Illegal term(s): [p.Cys142Met]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Cys142Ser
Illegal term(s): [p.Cys142Ser]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Cys47Ser
Illegal term(s): [p.Cys47Ser]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Cys716Ala
Illegal term(s): [p.Cys716Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Gln304Asn
Illegal term(s): [p.Gln304Asn]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Gln304Glu
Illegal term(s): [p.Gln304Glu]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Gln304Leu
Illegal term(s): [p.Gln304Leu]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Gln31Ala
Illegal term(s): [p.Gln31Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Gln323Leu
Illegal term(s): [p.Gln323Leu]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Gln71Leu
Illegal term(s): [p.Gln71Leu]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Glu100Ala
Illegal term(s): [p.Glu100Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Glu185Asp
Illegal term(s): [p.Glu185Asp]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Glu185Cys
Illegal term(s): [p.Glu185Cys]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Glu562Ala
Illegal term(s): [p.Glu562Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Glu988Gln
Illegal term(s): [p.Glu988Gln]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Glu998Ala
Illegal term(s): [p.Glu998Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_His1061Ala
Illegal term(s): [p.His1061Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_His107Ala
Illegal term(s): [p.His107Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_His111Asn
Illegal term(s): [p.His111Asn]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_His22Tyr
Illegal term(s): [p.His22Tyr]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_His2387Arg
Illegal term(s): [p.His2387Arg]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_His2387Pro
Illegal term(s): [p.His2387Pro]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_His86Ala
Illegal term(s): [p.His86Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ile105Ala
Illegal term(s): [p.Ile105Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ile122Asp
Illegal term(s): [p.Ile122Asp]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ile531Glu
Illegal term(s): [p.Ile531Glu]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ile825Ala
Illegal term(s): [p.Ile825Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu1037Ala
Illegal term(s): [p.Leu1037Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu104Ala
Illegal term(s): [p.Leu104Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu110Ala
Illegal term(s): [p.Leu110Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu127Ala
Illegal term(s): [p.Leu127Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu137Arg
Illegal term(s): [p.Leu137Arg]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu148Ala
Illegal term(s): [p.Leu148Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu221Asp
Illegal term(s): [p.Leu221Asp]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu225Asp
Illegal term(s): [p.Leu225Asp]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu225Gln
Illegal term(s): [p.Leu225Gln]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu228Asp
Illegal term(s): [p.Leu228Asp]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu232Ser
Illegal term(s): [p.Leu232Ser]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu239Asp
Illegal term(s): [p.Leu239Asp]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu239Glu
Illegal term(s): [p.Leu239Glu]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu239Ile
Illegal term(s): [p.Leu239Ile]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu239Pro
Illegal term(s): [p.Leu239Pro]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu433_Asn434delinsAlaPro
Illegal term(s): [p.Leu433_Asn434delinsAlaPro]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu489_His490delinsAlaAla
Illegal term(s): [p.Leu489_His490delinsAlaAla]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu829Ala
Illegal term(s): [p.Leu829Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu830Ala
Illegal term(s): [p.Leu830Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu88Ala
Illegal term(s): [p.Leu88Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu94Ala
Illegal term(s): [p.Leu94Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Lys1088Met
Illegal term(s): [p.Lys1088Met]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Lys1999Ala
Illegal term(s): [p.Lys1999Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Lys229Asp
Illegal term(s): [p.Lys229Asp]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Lys51Arg
Illegal term(s): [p.Lys51Arg]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Lys51Leu
Illegal term(s): [p.Lys51Leu]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Lys525Ala
Illegal term(s): [p.Lys525Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Lys63Gln
Illegal term(s): [p.Lys63Gln]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Lys992Asp
Illegal term(s): [p.Lys992Asp]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Met254Asp
Illegal term(s): [p.Met254Asp]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Met764Ala
Illegal term(s): [p.Met764Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Met77Glu
Illegal term(s): [p.Met77Glu]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Met882Ala
Illegal term(s): [p.Met882Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe109Ala
Illegal term(s): [p.Phe109Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe111Ala
Illegal term(s): [p.Phe111Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe114Ala
Illegal term(s): [p.Phe114Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe127Val
Illegal term(s): [p.Phe127Val]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe149Ala
Illegal term(s): [p.Phe149Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe151Ala
Illegal term(s): [p.Phe151Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe152Ala
Illegal term(s): [p.Phe152Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe156Ala
Illegal term(s): [p.Phe156Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe2003Ala
Illegal term(s): [p.Phe2003Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe236Ala
Illegal term(s): [p.Phe236Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe2382Leu
Illegal term(s): [p.Phe2382Leu]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe2392Leu
Illegal term(s): [p.Phe2392Leu]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe256Ala
Illegal term(s): [p.Phe256Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe292Ala
Illegal term(s): [p.Phe292Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe323Ala
Illegal term(s): [p.Phe323Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe374Ala
Illegal term(s): [p.Phe374Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe507Ala
Illegal term(s): [p.Phe507Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe779Ala
Illegal term(s): [p.Phe779Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe834Ala
Illegal term(s): [p.Phe834Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe85_Arg86delinsAlaAla
Illegal term(s): [p.Phe85_Arg86delinsAlaAla]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe9Ala
Illegal term(s): [p.Phe9Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Pro105Ala
Illegal term(s): [p.Pro105Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Pro13Cys
Illegal term(s): [p.Pro13Cys]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Pro2379Thr
Illegal term(s): [p.Pro2379Thr]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Pro721Ala
Illegal term(s): [p.Pro721Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Pro827Ala
Illegal term(s): [p.Pro827Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Pro82_Pro83delinsGlnAla
Illegal term(s): [p.Pro82_Pro83delinsGlnAla]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Pro831Ala
Illegal term(s): [p.Pro831Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ser113Ala
Illegal term(s): [p.Ser113Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ser117Ala
Illegal term(s): [p.Ser117Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ser122Asp
Illegal term(s): [p.Ser122Asp]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ser137Asp
Illegal term(s): [p.Ser137Asp]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ser271Ala
Illegal term(s): [p.Ser271Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ser30Ala
Illegal term(s): [p.Ser30Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ser325Arg
Illegal term(s): [p.Ser325Arg]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ser69Asp
Illegal term(s): [p.Ser69Asp]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ser832Ala
Illegal term(s): [p.Ser832Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ser840Ala
Illegal term(s): [p.Ser840Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ser841Ala
Illegal term(s): [p.Ser841Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ser85Ala
Illegal term(s): [p.Ser85Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Thr108Ile
Illegal term(s): [p.Thr108Ile]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Trp180Glu
Illegal term(s): [p.Trp180Glu]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Trp477Ala
Illegal term(s): [p.Trp477Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Trp47Ala
Illegal term(s): [p.Trp47Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Trp487Ala
Illegal term(s): [p.Trp487Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Tyr1040Ala
Illegal term(s): [p.Tyr1040Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Tyr1043Ala
Illegal term(s): [p.Tyr1043Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Tyr1059Ala
Illegal term(s): [p.Tyr1059Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Tyr106His
Illegal term(s): [p.Tyr106His]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Tyr529Ala
Illegal term(s): [p.Tyr529Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Tyr532His
Illegal term(s): [p.Tyr532His]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Tyr532Met
Illegal term(s): [p.Tyr532Met]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Tyr532Phe
Illegal term(s): [p.Tyr532Phe]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Tyr700Ala
Illegal term(s): [p.Tyr700Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Tyr73Ala
Illegal term(s): [p.Tyr73Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Tyr826Ala
Illegal term(s): [p.Tyr826Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Val27Asp
Illegal term(s): [p.Val27Asp]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Val529Glu
Illegal term(s): [p.Val529Glu]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Val76Asp
Illegal term(s): [p.Val76Asp]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Val824Ala
Illegal term(s): [p.Val824Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Val833Ala
Illegal term(s): [p.Val833Ala]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_pabp_hyd_domain
Illegal term(s): [pabp_hyd domain]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_phd_region
Illegal term(s): [phd region]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_phosphorylated
Illegal term(s): [phosphorylated]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_ProA-tag
Illegal term(s): [ProA-tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_protein_a_tag_region
Illegal term(s): [protein a tag region]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_ProteinA-tag
Illegal term(s): [ProteinA-tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_pS85
Illegal term(s): [pS85]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_pseudouridilation
Illegal term(s): [pseudouridilation]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Pseudouridine
Illegal term(s): [Pseudouridine]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_pT84
Illegal term(s): [pT84]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_region
Illegal term(s): [region]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region244-637
Illegal term(s): [Region244-637]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-100
Illegal term(s): [Region 1-100]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-115
Illegal term(s): [Region 1-115]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-127
Illegal term(s): [Region 1-127]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-129
Illegal term(s): [Region 1-129]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-14
Illegal term(s): [Region 1-14]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-169
Illegal term(s): [Region 1-169]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-174
Illegal term(s): [Region 1-174]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-20
Illegal term(s): [Region 1-20]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-200
Illegal term(s): [Region 1-200]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-230
Illegal term(s): [Region 1-230]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-240
Illegal term(s): [Region 1-240]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-253
Illegal term(s): [Region 1-253]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-265
Illegal term(s): [Region 1-265]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-27
Illegal term(s): [Region 1-27]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-275
Illegal term(s): [Region 1-275]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-309
Illegal term(s): [Region 1-309]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-395
Illegal term(s): [Region 1-395]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-42
Illegal term(s): [Region 1-42]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-424
Illegal term(s): [Region 1-424]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-50
Illegal term(s): [Region 1-50]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-548
Illegal term(s): [Region 1-548]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-768
Illegal term(s): [Region 1-768]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-86
Illegal term(s): [Region 1-86]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-92
Illegal term(s): [Region 1-92]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-93
Illegal term(s): [Region 1-93]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_101-632
Illegal term(s): [Region 101-632]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1049-1060
Illegal term(s): [Region 1049-1060]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1074-1104
Illegal term(s): [Region 1074-1104]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_114-163
Illegal term(s): [Region 114-163]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_116-206
Illegal term(s): [Region 116-206]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_122-150
Illegal term(s): [Region 122-150]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_122-171
Illegal term(s): [Region 122-171]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_125-174
Illegal term(s): [Region 125-174]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_132-229
Illegal term(s): [Region 132-229]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_138-187
Illegal term(s): [Region 138-187]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_145-265
Illegal term(s): [Region 145-265]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_15-202
Illegal term(s): [Region 15-202]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_151-214
Illegal term(s): [Region 151-214]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_154-415
Illegal term(s): [Region 154-415]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_165-214
Illegal term(s): [Region 165-214]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_17-184
Illegal term(s): [Region 17-184]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_17-42
Illegal term(s): [Region 17-42]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_173-876
Illegal term(s): [Region 173-876]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_179-265
Illegal term(s): [Region 179-265]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_179-322
Illegal term(s): [Region 179-322]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_18-186
Illegal term(s): [Region 18-186]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_185-290
Illegal term(s): [Region 185-290]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_19-187
Illegal term(s): [Region 19-187]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_2-194
Illegal term(s): [Region 2-194]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_2-201
Illegal term(s): [Region 2-201]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_2-203
Illegal term(s): [Region 2-203]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_2-206
Illegal term(s): [Region 2-206]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_2-208
Illegal term(s): [Region 2-208]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_2-211
Illegal term(s): [Region 2-211]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_2-212
Illegal term(s): [Region 2-212]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_2-213
Illegal term(s): [Region 2-213]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_2-215
Illegal term(s): [Region 2-215]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_2-216
Illegal term(s): [Region 2-216]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_2-217
Illegal term(s): [Region 2-217]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_2-237
Illegal term(s): [Region 2-237]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_20-76
Illegal term(s): [Region 20-76]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_201-251
Illegal term(s): [Region 201-251]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_204-238
Illegal term(s): [Region 204-238]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_226-275
Illegal term(s): [Region 226-275]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_226-395
Illegal term(s): [Region 226-395]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_230-398
Illegal term(s): [Region 230-398]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_244-637
Illegal term(s): [Region 244-637]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_250-372
Illegal term(s): [Region 250-372]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_269-318
Illegal term(s): [Region 269-318]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_270-325
Illegal term(s): [Region 270-325]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_284-764
Illegal term(s): [Region 284-764]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_3-190
Illegal term(s): [Region 3-190]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_31-290
Illegal term(s): [Region 31-290]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_315-356
Illegal term(s): [Region 315-356]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_336-439
Illegal term(s): [Region 336-439]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_354-401
Illegal term(s): [Region 354-401]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_39-286
Illegal term(s): [Region 39-286]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_398-633
Illegal term(s): [Region 398-633]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_4-178
Illegal term(s): [Region 4-178]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_401-661
Illegal term(s): [Region 401-661]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_408-1177
Illegal term(s): [Region 408-1177]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_41-70
Illegal term(s): [Region 41-70]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_41-99
Illegal term(s): [Region 41-99]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_414-651
Illegal term(s): [Region 414-651]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_416-651
Illegal term(s): [Region 416-651]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_42-242
Illegal term(s): [Region 42-242]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_458-862
Illegal term(s): [Region 458-862]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_46-197
Illegal term(s): [Region 46-197]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_47-608
Illegal term(s): [Region 47-608]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_476-526
Illegal term(s): [Region 476-526]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_494-534
Illegal term(s): [Region 494-534]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_5-176
Illegal term(s): [Region 5-176]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_50-100
Illegal term(s): [Region 50-100]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_region_51-142
Illegal term(s): [Region 51-142]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_52-174
Illegal term(s): [Region 52-174]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_527-668
Illegal term(s): [Region 527-668]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_53-308
Illegal term(s): [Region 53-308]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_535-592
Illegal term(s): [Region 535-592]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_543-599
Illegal term(s): [Region 543-599]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_548-752
Illegal term(s): [Region 548-752]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_572-853
Illegal term(s): [Region 572-853]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_590-639
Illegal term(s): [Region 590-639]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_590-671
Illegal term(s): [Region 590-671]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_6-151
Illegal term(s): [Region 6-151]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_6-214
Illegal term(s): [Region 6-214]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_6-224
Illegal term(s): [Region 6-224]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_605-621
Illegal term(s): [Region 605-621]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_61-110
Illegal term(s): [Region 61-110]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_61-891
Illegal term(s): [Region 61-891]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_66-115
Illegal term(s): [Region 66-115]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_68-361
Illegal term(s): [Region 68-361]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_71-132
Illegal term(s): [Region 71-132]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_74-123
Illegal term(s): [Region 74-123]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_765-888
Illegal term(s): [Region 765-888]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_774-823
Illegal term(s): [Region 774-823]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_81-140
Illegal term(s): [Region 81-140]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_82-106
Illegal term(s): [Region 82-106]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_84-101
Illegal term(s): [Region 84-101]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_9-77
Illegal term(s): [Region 9-77]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_966-1068
Illegal term(s): [Region 966-1068]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_S622
Illegal term(s): [S622]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Sephadex_and_Streptavidin_binding_RNA_affinity_tag
Illegal term(s): [Sephadex and Streptavidin binding RNA affinity tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_sst2-n-ubg
Illegal term(s): [sst2-n-ubg]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_ste2-c-ub-lv
Illegal term(s): [ste2-c-ub-lv]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_T600
Illegal term(s): [T600]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_T600_T609
Illegal term(s): [T600/T609]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_T7-tag
Illegal term(s): [T7-tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_t7_tagged
Illegal term(s): [t7 tagged]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_tag
Illegal term(s): [tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_tagged_molecule
Illegal term(s): [tagged molecule]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_tap
Illegal term(s): [TAP]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_TAP-tag
Illegal term(s): [TAP-tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_TAP_Tag
Illegal term(s): [TAP tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_tap_tagged
Illegal term(s): [tap tagged]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_thr-12
Illegal term(s): [thr-12]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_thr298
Illegal term(s): [thr298]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_tpr_region
Illegal term(s): [tpr region]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_tyr579
Illegal term(s): [tyr579]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_U_methylation
Illegal term(s): [U methylation]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_undefined_mutation
Illegal term(s): [undefined mutation]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_V5-tag
Illegal term(s): [V5-tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_ww_region
Illegal term(s): [ww region]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_xpf-like_region
Illegal term(s): [xpf-like region]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_YFP-tag
Illegal term(s): [YFP-tag]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_yfp_tagged
Illegal term(s): [yfp tagged]; [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)

WARNING: illegal.cv.xref , category: SPECIFICATION, cases: 469, not fixed: 469
Unification xref cannot be resolved to a recommended term for the controlled vocabulary

object: http://pathwaycommons.org/yeast1/InteractionVocabulary_physical_interaction
Illegal xref(s): [MOLECULAR INTERACTIONS ONTOLOGY:MI:0218]; info: [Valid 'MI' terms: ALL children of MI:0190]
(found by: org.biopax.validator.rules.InteractionTypeCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_1-108_141-307_binding_region
Illegal xref(s): [intact:EBI-15600192]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_1-138_binding_region
Illegal xref(s): [intact:EBI-15600305]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_1-154_binding_region
Illegal xref(s): [intact:EBI-15601347]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_1-234_binding_site
Illegal xref(s): [intact:EBI-15673790]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_13Myc_tag
Illegal xref(s): [intact:EBI-15663848]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_146
Illegal xref(s): [intact:EBI-1009039]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_152
Illegal xref(s): [intact:EBI-1009045]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_190-210_binding_region
Illegal xref(s): [intact:EBI-15600214]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_2210-2413_binding_region
Illegal xref(s): [intact:EBI-15663927]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_238
Illegal xref(s): [intact:EBI-1009066]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_243
Illegal xref(s): [intact:EBI-1009058]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_26
Illegal xref(s): [intact:EBI-1009041]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_288-494_binding_region
Illegal xref(s): [intact:EBI-15622726]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_307
Illegal xref(s): [intact:EBI-1009075]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_32P-label
Illegal xref(s): [intact:EBI-15684177]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_35S-label
Illegal xref(s): [intact:EBI-15613284]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_36
Illegal xref(s): [intact:EBI-1009060]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_402-468_binding_region
Illegal xref(s): [intact:EBI-15601350]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_457-468_binding_region
Illegal xref(s): [intact:EBI-15601352]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_5-172_binding_region
Illegal xref(s): [intact:EBI-15622744]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_520
Illegal xref(s): [intact:EBI-1009070]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_64-199_binding_region
Illegal xref(s): [intact:EBI-15622782]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Glu554Ala_Met557Ser_Leu558Ser_
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Ser113Ala_Ser117Ala_
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Ser113Ala_Ser122Ala_Ser137Ala_
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Gln304Leu
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Glu185Asp
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Glu185Cys
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Glu562Ala
Illegal xref(s): [intact:EBI-15629675]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Glu988Gln
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Glu998Ala
Illegal xref(s): [intact:EBI-1635323]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_His1061Ala
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_His107Ala
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_His111Asn
Illegal xref(s): [intact:EBI-15636417]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_His22Tyr
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_His2387Arg
Illegal xref(s): [intact:EBI-15663935]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_His2387Pro
Illegal xref(s): [intact:EBI-15663938]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_His86Ala
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ile105Ala
Illegal xref(s): [intact:EBI-15669947]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ile122Asp
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ile531Glu
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ile825Ala
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu1037Ala
Illegal xref(s): [intact:EBI-1635337]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu104Ala
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu110Ala
Illegal xref(s): [intact:EBI-15670006]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu127Ala
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu137Arg
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu148Ala
Illegal xref(s): [intact:EBI-15669934]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu221Asp
Illegal xref(s): [intact:EBI-15663527]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu225Asp
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu225Gln
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu228Asp
Illegal xref(s): [intact:EBI-15663536]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu232Ser
Illegal xref(s): [intact:EBI-13644493]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu239Asp
Illegal xref(s): [intact:EBI-15707871]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu239Glu
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu239Ile
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu239Pro
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu433_Asn434delinsAlaPro
Illegal xref(s): [intact:EBI-1798447]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu489_His490delinsAlaAla
Illegal xref(s): [intact:EBI-1798442]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu829Ala
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu830Ala
Illegal xref(s): [mint:MINT-4794003]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu88Ala
Illegal xref(s): [intact:EBI-15670014]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Leu94Ala
Illegal xref(s): [intact:EBI-15702253]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Lys1088Met
Illegal xref(s): [mint:MINT-5207395]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Lys1999Ala
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Lys229Asp
Illegal xref(s): [intact:EBI-15663539]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Lys51Arg
Illegal xref(s): [intact:EBI-15623302]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Lys51Leu
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Lys525Ala
Illegal xref(s): [mint:MINT-4788952]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Lys63Gln
Illegal xref(s): [intact:EBI-15696286]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Lys992Asp
Illegal xref(s): [intact:EBI-1633732]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Met254Asp
Illegal xref(s): [intact:EBI-1268043]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Met764Ala
Illegal xref(s): [intact:EBI-15629681]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Met77Glu
Illegal xref(s): [intact:EBI-15696295]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Met882Ala
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe109Ala
Illegal xref(s): [intact:EBI-15622674]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe111Ala
Illegal xref(s): [intact:EBI-15670008]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe114Ala
Illegal xref(s): [intact:EBI-15670010]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe127Val
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe149Ala
Illegal xref(s): [intact:EBI-15669937]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe151Ala
Illegal xref(s): [intact:EBI-8817821]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe152Ala
Illegal xref(s): [intact:EBI-15669940]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe156Ala
Illegal xref(s): [intact:EBI-8817826]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe2003Ala
Illegal xref(s): [intact:EBI-16420950]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe236Ala
Illegal xref(s): [intact:EBI-15707854]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe2382Leu
Illegal xref(s): [intact:EBI-15663932]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe2392Leu
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe256Ala
Illegal xref(s): [intact:EBI-16420987]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe292Ala
Illegal xref(s): [intact:EBI-16420994]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe323Ala
Illegal xref(s): [intact:EBI-1110753]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe374Ala
Illegal xref(s): [intact:EBI-16421054]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe507Ala
Illegal xref(s): [mint:MINT-4788945]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe779Ala
Illegal xref(s): [mint:MINT-4789040]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe834Ala
Illegal xref(s): [mint:MINT-4794158]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe85_Arg86delinsAlaAla
Illegal xref(s): [intact:EBI-15670012]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe9Ala
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Pro105Ala
Illegal xref(s): [intact:EBI-1379163]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Pro13Cys
Illegal xref(s): [intact:EBI-15709896]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Pro2379Thr
Illegal xref(s): [intact:EBI-15663929]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Pro721Ala
Illegal xref(s): [intact:EBI-15629672]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Pro827Ala
Illegal xref(s): [mint:MINT-4793967]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Pro82_Pro83delinsGlnAla
Illegal xref(s): [intact:EBI-1379161]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Pro831Ala
Illegal xref(s): [mint:MINT-4794087]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ser113Ala
Illegal xref(s): [intact:EBI-15666949]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ser117Ala
Illegal xref(s): [intact:EBI-15666952]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ser122Asp
Illegal xref(s): [intact:EBI-15722502]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ser137Asp
Illegal xref(s): [intact:EBI-15722505]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ser271Ala
Illegal xref(s): [intact:EBI-16715742]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ser30Ala
Illegal xref(s): [intact:EBI-16715740]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ser325Arg
Illegal xref(s): [intact:EBI-13253242]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ser69Asp
Illegal xref(s): [intact:EBI-15696289]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ser832Ala
Illegal xref(s): [mint:MINT-4794114]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ser840Ala
Illegal xref(s): [mint:MINT-3380919]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ser841Ala
Illegal xref(s): [mint:MINT-3380916]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Ser85Ala
Illegal xref(s): [intact:EBI-15613348]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Thr108Ile
Illegal xref(s): [mint:MINT-5225278]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Trp180Glu
Illegal xref(s): [intact:EBI-2567088]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Trp477Ala
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Trp487Ala
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Tyr1040Ala
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Tyr1043Ala
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Tyr1059Ala
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Tyr106His
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Tyr529Ala
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Tyr532His
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Tyr532Met
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Tyr532Phe
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Tyr700Ala
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Tyr73Ala
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Tyr826Ala
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Val27Asp
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Val529Glu
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Val76Asp
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Val824Ala
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Val833Ala
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_pabp_hyd_domain
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_phd_region
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_phosphorylated
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_protein_a_tag_region
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_ProteinA-tag
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_pS85
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_pseudouridilation
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_pT84
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-100
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-115
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-127
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-129
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-14
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-169
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-174
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-20
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-200
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-230
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-240
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-253
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-265
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-27
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-275
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-309
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-395
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-42
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-424
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-50
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-548
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-768
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-86
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-92
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_1-93
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_101-632
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_116-206
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_122-171
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_151-214
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_165-214
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_19-187
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object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_2-194
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_2-201
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_2-203
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_2-206
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_2-208
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_2-211
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_2-212
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_2-213
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_2-215
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_2-216
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_2-217
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_2-237
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_20-76
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_201-251
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_204-238
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(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_226-275
Illegal xref(s): [intact:EBI-15707607]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_226-395
Illegal xref(s): [intact:EBI-15713981]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_230-398
Illegal xref(s): [intact:EBI-15659531]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_244-637
Illegal xref(s): [intact:EBI-15592390]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_250-372
Illegal xref(s): [intact:EBI-15629558]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_269-318
Illegal xref(s): [intact:EBI-15707670]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_270-325
Illegal xref(s): [intact:EBI-15696072]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_284-764
Illegal xref(s): [intact:EBI-15615538]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_3-190
Illegal xref(s): [intact:EBI-15592736]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_31-290
Illegal xref(s): [intact:EBI-16227149]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_315-356
Illegal xref(s): [intact:EBI-15618949]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_336-439
Illegal xref(s): [intact:EBI-15677544]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_354-401
Illegal xref(s): [intact:EBI-15619021]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_39-286
Illegal xref(s): [intact:EBI-15679287]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_398-633
Illegal xref(s): [intact:EBI-15658398]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_4-178
Illegal xref(s): [intact:EBI-15592900]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_401-661
Illegal xref(s): [intact:EBI-15629605]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_408-1177
Illegal xref(s): [intact:EBI-15677289]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_41-70
Illegal xref(s): [intact:EBI-15707712]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_41-99
Illegal xref(s): [intact:EBI-15588529]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_414-651
Illegal xref(s): [intact:EBI-15629632]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_416-651
Illegal xref(s): [intact:EBI-16227053]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_42-242
Illegal xref(s): [intact:EBI-15722434]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_458-862
Illegal xref(s): [intact:EBI-15613324]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_46-197
Illegal xref(s): [intact:EBI-15636400]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_47-608
Illegal xref(s): [intact:EBI-15669404]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_476-526
Illegal xref(s): [intact:EBI-15707796]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_494-534
Illegal xref(s): [intact:EBI-15707490]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_5-176
Illegal xref(s): [intact:EBI-15592603]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_50-100
Illegal xref(s): [intact:EBI-15714303]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_region_51-142
Illegal xref(s): [intact:EBI-15636320]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_52-174
Illegal xref(s): [intact:EBI-15604466]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_527-668
Illegal xref(s): [intact:EBI-15615474]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_53-308
Illegal xref(s): [intact:EBI-15598619]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_535-592
Illegal xref(s): [intact:EBI-15721725]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_543-599
Illegal xref(s): [intact:EBI-15607473]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_548-752
Illegal xref(s): [intact:EBI-15607470]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_572-853
Illegal xref(s): [intact:EBI-15713984]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_590-639
Illegal xref(s): [intact:EBI-15615590]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_590-671
Illegal xref(s): [intact:EBI-15696066]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_6-151
Illegal xref(s): [intact:EBI-15718136]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_6-214
Illegal xref(s): [intact:EBI-15718254]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_6-224
Illegal xref(s): [intact:EBI-15718112]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_605-621
Illegal xref(s): [intact:EBI-15721728]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_61-110
Illegal xref(s): [intact:EBI-15615535]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_61-891
Illegal xref(s): [intact:EBI-15629576]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_66-115
Illegal xref(s): [intact:EBI-15707775]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_68-361
Illegal xref(s): [intact:EBI-15614031]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_71-132
Illegal xref(s): [intact:EBI-15716939]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_74-123
Illegal xref(s): [intact:EBI-15707817]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_765-888
Illegal xref(s): [intact:EBI-15621033]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_774-823
Illegal xref(s): [intact:EBI-15707586]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_81-140
Illegal xref(s): [intact:EBI-15669895]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_82-106
Illegal xref(s): [intact:EBI-15702199]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_84-101
Illegal xref(s): [intact:EBI-15702311]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_9-77
Illegal xref(s): [intact:EBI-15696117]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Region_966-1068
Illegal xref(s): [intact:EBI-15696063]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_S622
Illegal xref(s): [intact:EBI-15615587]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Sephadex_and_Streptavidin_binding_RNA_affinity_tag
Illegal xref(s): [intact:EBI-12556120]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_sst2-n-ubg
Illegal xref(s): [intact:EBI-1099825]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_ste2-c-ub-lv
Illegal xref(s): [intact:EBI-1099827]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_T600
Illegal xref(s): [intact:EBI-15615615]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_T600_T609
Illegal xref(s): [intact:EBI-15615583]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_T7-tag
Illegal xref(s): [intact:EBI-15659844]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_t7_tagged
Illegal xref(s): [mint:MINT-3391756]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_tag
Illegal xref(s): [intact:EBI-10957709]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_tagged_molecule
Illegal xref(s): [mint:MINT-4791184]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_tap
Illegal xref(s): [intact:EBI-10916781]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_TAP-tag
Illegal xref(s): [intact:EBI-15718156]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_TAP_Tag
Illegal xref(s): [intact:EBI-15663885]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_tap_tagged
Illegal xref(s): [mint:MINT-2881696]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_thr-12
Illegal xref(s): [intact:EBI-1645639]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_thr298
Illegal xref(s): [intact:EBI-1808310]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_tpr_region
Illegal xref(s): [interpro:IPR019734]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_tyr579
Illegal xref(s): [intact:EBI-1808316]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_U_methylation
Illegal xref(s): [chebi:CHEBI:19227]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_undefined_mutation
Illegal xref(s): [mint:MINT-3377179]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_V5-tag
Illegal xref(s): [intact:EBI-16227185]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_ww_region
Illegal xref(s): [interpro:IPR002349]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_xpf-like_region
Illegal xref(s): [intact:EBI-6141217]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_YFP-tag
Illegal xref(s): [intact:EBI-15702234]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)
object: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_yfp_tagged
Illegal xref(s): [mint:MINT-5225071]; info: [Valid 'SO' terms: DIRECT children of SO:0000001]
(found by: org.biopax.validator.rules.SequenceRegionCvRule)

WARNING: illegal.property.value , category: RECOMMENDATION, cases: 2, all fixed!
Data property value might be wrong

WARNING: invalid.id.format , category: RECOMMENDATION, cases: 1136, not fixed: 1130
Xref 'id' value does not match the standard pattern for this type of db identifier. If this is due to the version of the object is embedded into the id, please use the idVersion property instead. If the database was not properly recognized (and the pattern is wrong), consider using a standard, more specific, db name (or contact the MIRIAM or identifiers.org team).

object: http://pathwaycommons.org/yeast1/RelationshipXref_imex_IM-1_imex-primary
db: imex (recognized as: IMEX), id: IM-1, pattern: ^IM-\d+(-?)(\d+?)$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_intact_MINT-1504668_intact-secondary
db: intact (recognized as: INTACT), id: MINT-1504668, pattern: ^EBI\-[0-9]+$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_intact_MINT-1864693_intact-secondary
db: intact (recognized as: INTACT), id: MINT-1864693, pattern: ^EBI\-[0-9]+$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_intact_MINT-3083921_intact-secondary
db: intact (recognized as: INTACT), id: MINT-3083921, pattern: ^EBI\-[0-9]+$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_intact_MINT-4299715_intact-secondary
db: intact (recognized as: INTACT), id: MINT-4299715, pattern: ^EBI\-[0-9]+$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_intact_MINT-4486763_intact-secondary
db: intact (recognized as: INTACT), id: MINT-4486763, pattern: ^EBI\-[0-9]+$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_intact_MINT-4692881_intact-secondary
db: intact (recognized as: INTACT), id: MINT-4692881, pattern: ^EBI\-[0-9]+$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_intact_MINT-4788648_intact-secondary
db: intact (recognized as: INTACT), id: MINT-4788648, pattern: ^EBI\-[0-9]+$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_intact_MINT-4809760_intact-secondary
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P33332
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(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_P33334
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12045
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
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(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12191
db: mint (recognized as: MINT), id: Q12191, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12192
db: mint (recognized as: MINT), id: Q12192, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12221
db: mint (recognized as: MINT), id: Q12221, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12230
db: mint (recognized as: MINT), id: Q12230, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12236
db: mint (recognized as: MINT), id: Q12236, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12241
db: mint (recognized as: MINT), id: Q12241, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12245
db: mint (recognized as: MINT), id: Q12245, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12250
db: mint (recognized as: MINT), id: Q12250, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12255
db: mint (recognized as: MINT), id: Q12255, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12263
db: mint (recognized as: MINT), id: Q12263, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12265
db: mint (recognized as: MINT), id: Q12265, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12271
db: mint (recognized as: MINT), id: Q12271, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12276
db: mint (recognized as: MINT), id: Q12276, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12277
db: mint (recognized as: MINT), id: Q12277, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12285
db: mint (recognized as: MINT), id: Q12285, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12306
db: mint (recognized as: MINT), id: Q12306, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12311
db: mint (recognized as: MINT), id: Q12311, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12328
db: mint (recognized as: MINT), id: Q12328, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12334
db: mint (recognized as: MINT), id: Q12334, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12342
db: mint (recognized as: MINT), id: Q12342, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12347
db: mint (recognized as: MINT), id: Q12347, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12365
db: mint (recognized as: MINT), id: Q12365, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12377
db: mint (recognized as: MINT), id: Q12377, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12383
db: mint (recognized as: MINT), id: Q12383, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12386
db: mint (recognized as: MINT), id: Q12386, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12406
db: mint (recognized as: MINT), id: Q12406, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12421
db: mint (recognized as: MINT), id: Q12421, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12432
db: mint (recognized as: MINT), id: Q12432, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12446
db: mint (recognized as: MINT), id: Q12446, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12447
db: mint (recognized as: MINT), id: Q12447, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12451
db: mint (recognized as: MINT), id: Q12451, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12453
db: mint (recognized as: MINT), id: Q12453, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12460
db: mint (recognized as: MINT), id: Q12460, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12461
db: mint (recognized as: MINT), id: Q12461, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12464
db: mint (recognized as: MINT), id: Q12464, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12477
db: mint (recognized as: MINT), id: Q12477, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12488
db: mint (recognized as: MINT), id: Q12488, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12494
db: mint (recognized as: MINT), id: Q12494, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12495
db: mint (recognized as: MINT), id: Q12495, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12499
db: mint (recognized as: MINT), id: Q12499, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12508
db: mint (recognized as: MINT), id: Q12508, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12514
db: mint (recognized as: MINT), id: Q12514, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12522
db: mint (recognized as: MINT), id: Q12522, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12523
db: mint (recognized as: MINT), id: Q12523, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12527
db: mint (recognized as: MINT), id: Q12527, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12531
db: mint (recognized as: MINT), id: Q12531, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12532
db: mint (recognized as: MINT), id: Q12532, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12690
db: mint (recognized as: MINT), id: Q12690, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12734
db: mint (recognized as: MINT), id: Q12734, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12743
db: mint (recognized as: MINT), id: Q12743, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12753
db: mint (recognized as: MINT), id: Q12753, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q12754
db: mint (recognized as: MINT), id: Q12754, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q15545
db: mint (recognized as: MINT), id: Q15545, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q3E7Y5
db: mint (recognized as: MINT), id: Q3E7Y5, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q3E833
db: mint (recognized as: MINT), id: Q3E833, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q53HI1
db: mint (recognized as: MINT), id: Q53HI1, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q58A45
db: mint (recognized as: MINT), id: Q58A45, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q5HZG4
db: mint (recognized as: MINT), id: Q5HZG4, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q6PHN9
db: mint (recognized as: MINT), id: Q6PHN9, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q6Q547
db: mint (recognized as: MINT), id: Q6Q547, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q7LZU3
db: mint (recognized as: MINT), id: Q7LZU3, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q7Z3U7
db: mint (recognized as: MINT), id: Q7Z3U7, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q86TI0
db: mint (recognized as: MINT), id: Q86TI0, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q92328
db: mint (recognized as: MINT), id: Q92328, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q92973
db: mint (recognized as: MINT), id: Q92973, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q96B36
db: mint (recognized as: MINT), id: Q96B36, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q96J02
db: mint (recognized as: MINT), id: Q96J02, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q96RN5
db: mint (recognized as: MINT), id: Q96RN5, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q99176
db: mint (recognized as: MINT), id: Q99176, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q99186
db: mint (recognized as: MINT), id: Q99186, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q99220
db: mint (recognized as: MINT), id: Q99220, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q99257
db: mint (recognized as: MINT), id: Q99257, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q99296
db: mint (recognized as: MINT), id: Q99296, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q99332
db: mint (recognized as: MINT), id: Q99332, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q99380
db: mint (recognized as: MINT), id: Q99380, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q99383
db: mint (recognized as: MINT), id: Q99383, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q99394
db: mint (recognized as: MINT), id: Q99394, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q9C103
db: mint (recognized as: MINT), id: Q9C103, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q9ESK4
db: mint (recognized as: MINT), id: Q9ESK4, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q9FR53
db: mint (recognized as: MINT), id: Q9FR53, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q9H0U4
db: mint (recognized as: MINT), id: Q9H0U4, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q9HAU4
db: mint (recognized as: MINT), id: Q9HAU4, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q9UJY5
db: mint (recognized as: MINT), id: Q9UJY5, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_mint_Q9Y294
db: mint (recognized as: MINT), id: Q9Y294, pattern: ^MINT\-\d{1,7}$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_refseq_WP_000263098_1
db: refseq (recognized as: REFSEQ), id: WP_000263098.1, pattern: ^((AC|AP|NC|NG|NM|NP|NR|NT|NW|XM|XP|XR|YP|ZP)_\d+|(NZ\_[A-Z]{4}\d+))(\.\d+)?$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_refseq_WP_000653944_1
db: refseq (recognized as: REFSEQ), id: WP_000653944.1, pattern: ^((AC|AP|NC|NG|NM|NP|NR|NT|NW|XM|XP|XR|YP|ZP)_\d+|(NZ\_[A-Z]{4}\d+))(\.\d+)?$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_refseq_WP_003399940_1
db: refseq (recognized as: REFSEQ), id: WP_003399940.1, pattern: ^((AC|AP|NC|NG|NM|NP|NR|NT|NW|XM|XP|XR|YP|ZP)_\d+|(NZ\_[A-Z]{4}\d+))(\.\d+)?$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_refseq_WP_003399963_1
db: refseq (recognized as: REFSEQ), id: WP_003399963.1, pattern: ^((AC|AP|NC|NG|NM|NP|NR|NT|NW|XM|XP|XR|YP|ZP)_\d+|(NZ\_[A-Z]{4}\d+))(\.\d+)?$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_refseq_WP_003405305_1
db: refseq (recognized as: REFSEQ), id: WP_003405305.1, pattern: ^((AC|AP|NC|NG|NM|NP|NR|NT|NW|XM|XP|XR|YP|ZP)_\d+|(NZ\_[A-Z]{4}\d+))(\.\d+)?$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_refseq_WP_003416369_1
db: refseq (recognized as: REFSEQ), id: WP_003416369.1, pattern: ^((AC|AP|NC|NG|NM|NP|NR|NT|NW|XM|XP|XR|YP|ZP)_\d+|(NZ\_[A-Z]{4}\d+))(\.\d+)?$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_refseq_WP_003899933_1
db: refseq (recognized as: REFSEQ), id: WP_003899933.1, pattern: ^((AC|AP|NC|NG|NM|NP|NR|NT|NW|XM|XP|XR|YP|ZP)_\d+|(NZ\_[A-Z]{4}\d+))(\.\d+)?$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_refseq_WP_003915886_1
db: refseq (recognized as: REFSEQ), id: WP_003915886.1, pattern: ^((AC|AP|NC|NG|NM|NP|NR|NT|NW|XM|XP|XR|YP|ZP)_\d+|(NZ\_[A-Z]{4}\d+))(\.\d+)?$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_sgd_S000006490__see-also
db: sgd (recognized as: SGD), id: S000006490, pattern: ^((S\d+$)|(Y[A-Z]{2}\d{3}[a-zA-Z](\-[A-Z])?))$
(found by: org.biopax.validator.rules.XrefRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/RelationshipXref_uniprotkb_P36956-1_identity
db: UNIPROT KNOWLEDGEBASE (recognized as: UNIPROT KNOWLEDGEBASE), id: P36956-1, pattern: ^([A-N,R-Z][0-9]([A-Z][A-Z, 0-9][A-Z, 0-9][0-9]){1,2})|([O,P,Q][0-9][A-Z, 0-9][A-Z, 0-9][A-Z, 0-9][0-9])(\.\d+)?$
(found by: org.biopax.validator.rules.XrefRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/RelationshipXref_uniprotkb_Q9NP72-1_identity
db: UNIPROT KNOWLEDGEBASE (recognized as: UNIPROT KNOWLEDGEBASE), id: Q9NP72-1, pattern: ^([A-N,R-Z][0-9]([A-Z][A-Z, 0-9][A-Z, 0-9][0-9]){1,2})|([O,P,Q][0-9][A-Z, 0-9][A-Z, 0-9][A-Z, 0-9][0-9])(\.\d+)?$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/RelationshipXref_uniprotkb_UBIQ_HUMAN_see-also
db: UNIPROT KNOWLEDGEBASE (recognized as: UNIPROT KNOWLEDGEBASE), id: UBIQ_HUMAN, pattern: ^([A-N,R-Z][0-9]([A-Z][A-Z, 0-9][A-Z, 0-9][0-9]){1,2})|([O,P,Q][0-9][A-Z, 0-9][A-Z, 0-9][A-Z, 0-9][0-9])(\.\d+)?$
(found by: org.biopax.validator.rules.XrefRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/UnificationXref_chebi_40460
db: chebi (recognized as: CHEBI), id: 40460, pattern: ^CHEBI:\d+$
(found by: org.biopax.validator.rules.XrefRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/UnificationXref_chebi_70854
db: chebi (recognized as: CHEBI), id: 70854, pattern: ^CHEBI:\d+$
(found by: org.biopax.validator.rules.XrefRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_taxonomy_-2
db: Taxonomy (recognized as: TAXONOMY), id: -2, pattern: ^\d+$
(found by: org.biopax.validator.rules.XrefRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/UnificationXref_uniprotkb_P36956-1
db: UNIPROT KNOWLEDGEBASE (recognized as: UNIPROT KNOWLEDGEBASE), id: P36956-1, pattern: ^([A-N,R-Z][0-9]([A-Z][A-Z, 0-9][A-Z, 0-9][0-9]){1,2})|([O,P,Q][0-9][A-Z, 0-9][A-Z, 0-9][A-Z, 0-9][0-9])(\.\d+)?$
(found by: org.biopax.validator.rules.XrefRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/UnificationXref_uniprotkb_Q9NP72-1
db: UNIPROT KNOWLEDGEBASE (recognized as: UNIPROT KNOWLEDGEBASE), id: Q9NP72-1, pattern: ^([A-N,R-Z][0-9]([A-Z][A-Z, 0-9][A-Z, 0-9][0-9]){1,2})|([O,P,Q][0-9][A-Z, 0-9][A-Z, 0-9][A-Z, 0-9][0-9])(\.\d+)?$
(found by: org.biopax.validator.rules.XrefRule)

WARNING: min.cardinality.violated , category: SPECIFICATION, cases: 1, not fixed: 1
Minimal cardinality violation

WARNING: no.display.name , category: RECOMMENDATION, cases: 26, all fixed!
No display name is specified. It is useful to have one for the visualization purposes

[FIXED!] object: http://pathwaycommons.org/yeast1/BioSource_taxonomy_-1
(found by: org.biopax.validator.rules.DisplayNameRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/BioSource_taxonomy_-2
(found by: org.biopax.validator.rules.DisplayNameRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/BioSource_taxonomy_10090
(found by: org.biopax.validator.rules.DisplayNameRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/BioSource_taxonomy_10116
(found by: org.biopax.validator.rules.DisplayNameRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/BioSource_taxonomy_10710
(found by: org.biopax.validator.rules.DisplayNameRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/BioSource_taxonomy_114525
(found by: org.biopax.validator.rules.DisplayNameRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/BioSource_taxonomy_184922
(found by: org.biopax.validator.rules.DisplayNameRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/BioSource_taxonomy_1891767
(found by: org.biopax.validator.rules.DisplayNameRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/BioSource_taxonomy_284812
(found by: org.biopax.validator.rules.DisplayNameRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/BioSource_taxonomy_307796
(found by: org.biopax.validator.rules.DisplayNameRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/BioSource_taxonomy_353153
(found by: org.biopax.validator.rules.DisplayNameRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/BioSource_taxonomy_3702
(found by: org.biopax.validator.rules.DisplayNameRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/BioSource_taxonomy_39947
(found by: org.biopax.validator.rules.DisplayNameRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/BioSource_taxonomy_4932
(found by: org.biopax.validator.rules.DisplayNameRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/BioSource_taxonomy_5478
(found by: org.biopax.validator.rules.DisplayNameRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/BioSource_taxonomy_559292
(found by: org.biopax.validator.rules.DisplayNameRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/BioSource_taxonomy_6239
(found by: org.biopax.validator.rules.DisplayNameRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/BioSource_taxonomy_67723
(found by: org.biopax.validator.rules.DisplayNameRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/BioSource_taxonomy_70698
(found by: org.biopax.validator.rules.DisplayNameRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/BioSource_taxonomy_7227
(found by: org.biopax.validator.rules.DisplayNameRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/BioSource_taxonomy_83332
(found by: org.biopax.validator.rules.DisplayNameRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/BioSource_taxonomy_83333
(found by: org.biopax.validator.rules.DisplayNameRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/BioSource_taxonomy_8355
(found by: org.biopax.validator.rules.DisplayNameRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/BioSource_taxonomy_9606
(found by: org.biopax.validator.rules.DisplayNameRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/BioSource_taxonomy_9913
(found by: org.biopax.validator.rules.DisplayNameRule)
[FIXED!] object: http://pathwaycommons.org/yeast1/BioSource_taxonomy_9986
(found by: org.biopax.validator.rules.DisplayNameRule)

WARNING: not.allowed.xref , category: RECOMMENDATION, cases: 538, not fixed: 538
Database name in the UnificationXref (of a BioPAX element), probably, does not make sense for this type of element

object: http://pathwaycommons.org/yeast1/UnificationXref_chebi_40460
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_A_methylation, xref.db: chebi (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_chebi_70854
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_methylation, xref.db: chebi (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_chebi_CHEBI_19227
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_U_methylation, xref.db: chebi (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_elm_LIG_PAM2_1
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_lig_pam2_1_motif, xref.db: elm (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-1009039
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_146, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-1009041
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_26, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-1009045
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_152, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-1009052
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_94, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-1009058
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_243, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-1009060
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_36, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-1009066
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_238, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-1009070
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_520, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-1009075
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_307, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-1009077
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_88, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-1009080
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_90, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-10821990
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_tap, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-10916781
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_TAP, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-10916783
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Myc, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-10916793
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Tap, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-10916943
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_GFP, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-10957307
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_N_A, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-10957351
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_A192C_C193G__A194C, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-10957691
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_label, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-10957709
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_tag, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-1099825
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_sst2-n-ubg, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-1099827
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_ste2-c-ub-lv, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-1099831
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Gln304Glu, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-1099833
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Gln304Leu, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-1099857
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Gln304Asn, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-1099863
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Lys337Arg_Lys352Arg_Lys358Arg_Lys374Arg_Lys387Arg_Lys400Arg_Lys422Arg_, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-1099916
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Lys424Arg_Lys432Arg_Lys453Arg_, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-1099943
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Ser331Ala_Lys337Arg_Ser338Ala_Ser339Ala_Lys352Arg_Thr354Ala_Thr355Ala_Ser356Ala_Lys358Arg_Thr363Ala_Ser366Ala_Thr368Ala_Lys374Arg_Thr382Ala_Thr384Ala_Ser385Ala_Ser386Ala_Lys387Arg_Thr389Ala_Ser398Ala_Lys400Arg_Thr411Ala_Lys422Arg_, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-1110753
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Phe323Ala, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-11664382
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Arg88Asp, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-11664453
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p_Asp214Arg, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-1168394
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_gly97asp_del98-101, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-1176134
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Thr8Ala_Ser18Ala_Ser44Ala_Ser51Ala_, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-11784974
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_pseudouridilation, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-11784977
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Pseudouridine, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-1219425
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Thr4Ala_Ser11Ala_Thr29Ala_Ser43Ala_Ser69Ala_Ser71Ala_Ser81Ala_Thr102Ala_, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-1219434
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_p__Thr4Glu_Ser11Glu_Thr29Glu_Ser43Glu_Ser69Glu_Ser71Glu_Ser81Glu_Thr102Glu_, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-12556120
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_Sephadex_and_Streptavidin_binding_RNA_affinity_tag, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_intact_EBI-1266058
element: http://pathwaycommons.org/yeast1/SequenceRegionVocabulary_fg_motif, xref.db: intact (unification xrefs of: SequenceRegionVocabulary are limited to: [so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
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element: http://pathwaycommons.org/yeast1/SequenceModificationVocabulary_mutation_disrupting_rate, xref.db: psi-mi (unification xrefs of: SequenceModificationVocabulary are limited to: [mod, MOD, PSI-MOD, PROTEIN MODIFICATION ONTOLOGY, so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_psi-mi_MI_1130
element: http://pathwaycommons.org/yeast1/SequenceModificationVocabulary_mutation_decreasing_rate, xref.db: psi-mi (unification xrefs of: SequenceModificationVocabulary are limited to: [mod, MOD, PSI-MOD, PROTEIN MODIFICATION ONTOLOGY, so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_psi-mi_MI_1132
element: http://pathwaycommons.org/yeast1/SequenceModificationVocabulary_mutation_increasing_strength, xref.db: psi-mi (unification xrefs of: SequenceModificationVocabulary are limited to: [mod, MOD, PSI-MOD, PROTEIN MODIFICATION ONTOLOGY, so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_psi-mi_MI_1133
element: http://pathwaycommons.org/yeast1/SequenceModificationVocabulary_mutation_decreasing_strength, xref.db: psi-mi (unification xrefs of: SequenceModificationVocabulary are limited to: [mod, MOD, PSI-MOD, PROTEIN MODIFICATION ONTOLOGY, so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_psi-mi_MI_1259
element: http://pathwaycommons.org/yeast1/SequenceModificationVocabulary_acrylodan_label, xref.db: psi-mi (unification xrefs of: SequenceModificationVocabulary are limited to: [mod, MOD, PSI-MOD, PROTEIN MODIFICATION ONTOLOGY, so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_psi-mi_MI_2202
element: http://pathwaycommons.org/yeast1/SequenceModificationVocabulary_rna_chemical_modification, xref.db: psi-mi (unification xrefs of: SequenceModificationVocabulary are limited to: [mod, MOD, PSI-MOD, PROTEIN MODIFICATION ONTOLOGY, so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)
object: http://pathwaycommons.org/yeast1/UnificationXref_psi-mi_MI_2226
element: http://pathwaycommons.org/yeast1/SequenceModificationVocabulary_mutation_with_no_effect, xref.db: psi-mi (unification xrefs of: SequenceModificationVocabulary are limited to: [mod, MOD, PSI-MOD, PROTEIN MODIFICATION ONTOLOGY, so, SO, SEQUENCE ONTOLOGY, SEQUENCE TYPES AND FEATURES])
(found by: org.biopax.validator.rules.UnificationXrefLimitedRule)

WARNING: too.long.display.name , category: RECOMMENDATION, cases: 12, not fixed: 12
'displayName' exceeds the recommended maximum. These names should be kept short so they can easily be displayed, e.g., in a pathway diagram

object: http://pathwaycommons.org/yeast1/MolecularInteraction_1a57f5b3-ffc7-4c8e-a21a-fa580fe55b0f___null__2763470_
4_nitrophenyl dihydrogen phosphate-glc7-3, length=41 exceeds 25
(found by: org.biopax.validator.rules.DisplayNameRule)
object: http://pathwaycommons.org/yeast1/MolecularInteraction_405fade7-ad43-4a5b-95b3-78f874381c9f___null__1954770_
rrna 25s yeast-snr 43 yeast-1, length=29 exceeds 25
(found by: org.biopax.validator.rules.DisplayNameRule)
object: http://pathwaycommons.org/yeast1/MolecularInteraction_515ec34e-c3d5-4fd7-b57f-2d5cf9805145___null__2763460_
4_nitrophenyl dihydrogen phosphate-glc7-1, length=41 exceeds 25
(found by: org.biopax.validator.rules.DisplayNameRule)
object: http://pathwaycommons.org/yeast1/MolecularInteraction_7a4d0925-a9ad-46cf-8771-ff07532a91b6___null__2763476_
4_nitrophenyl dihydrogen phosphate-glc7-4, length=41 exceeds 25
(found by: org.biopax.validator.rules.DisplayNameRule)
object: http://pathwaycommons.org/yeast1/MolecularInteraction_7b2df9e6-2434-4658-87eb-ca51dcb523a1__IM-25684-4_1945642_
emg1-s_adenosyl_l_methionine_1-1, length=32 exceeds 25
(found by: org.biopax.validator.rules.DisplayNameRule)
object: http://pathwaycommons.org/yeast1/MolecularInteraction_9e7b9b84-b0f3-4bdb-822d-e0df08c7735f___null__2763464_
4_nitrophenyl dihydrogen phosphate-glc7-2, length=41 exceeds 25
(found by: org.biopax.validator.rules.DisplayNameRule)
object: http://pathwaycommons.org/yeast1/MolecularInteraction_fb56d397-8794-42db-a304-9a2abf150db3___null__1954766_
rrna 5.8s yeast-snr 43 yeast-1, length=30 exceeds 25
(found by: org.biopax.validator.rules.DisplayNameRule)
object: http://pathwaycommons.org/yeast1/SmallMolecule_chebi_CHEBI_17440_identity_1529029943446
4-nitrophenyl dihydrogen phosphate, length=34 exceeds 25
(found by: org.biopax.validator.rules.DisplayNameRule)
object: http://pathwaycommons.org/yeast1/SmallMolecule_chebi_CHEBI_17440_identity_1529029943449
4-nitrophenyl dihydrogen phosphate, length=34 exceeds 25
(found by: org.biopax.validator.rules.DisplayNameRule)
object: http://pathwaycommons.org/yeast1/SmallMolecule_chebi_CHEBI_17440_identity_1529029943452
4-nitrophenyl dihydrogen phosphate, length=34 exceeds 25
(found by: org.biopax.validator.rules.DisplayNameRule)
object: http://pathwaycommons.org/yeast1/SmallMolecule_chebi_CHEBI_17440_identity_1529029943456
4-nitrophenyl dihydrogen phosphate, length=34 exceeds 25
(found by: org.biopax.validator.rules.DisplayNameRule)
object: http://pathwaycommons.org/yeast1/SmallMoleculeReference_chebi_CHEBI_17440_identity
4-nitrophenyl dihydrogen phosphate, length=34 exceeds 25
(found by: org.biopax.validator.rules.DisplayNameRule)

WARNING: too.long.id , category: INFORMATION, cases: 1, not fixed: 1
Too long IDs (URIs) are allowed but not desirable, for it may cause various performance issues and errors in software that consumes BioPAX data. Also, if we look beyond a trivial data exchange use case, it is generally more difficult for a pathway data provider to support such verbose URIs, to keep it consistent from one release to another (note: ideally, a URI would be possible to resolve to a URL, with some data or summary - on that page)